Mining Domain Terminologies Using Search Engine's Query Log

Author(s):  
Weijian Ni ◽  
Tong Liu ◽  
Qingtian Zeng ◽  
Nengfu Xie

Domain terminologies are a basic resource for various natural language processing tasks. To automatically discover terminologies for a domain of interest, most traditional approaches mostly rely on a domain-specific corpus given in advance; thus, the performance of traditional approaches can only be guaranteed when collecting a high-quality domain-specific corpus, which requires extensive human involvement and domain expertise. In this article, we propose a novel approach that is capable of automatically mining domain terminologies using search engine's query log—a type of domain-independent corpus of higher availability, coverage, and timeliness than a manually collected domain-specific corpus. In particular, we represent query log as a heterogeneous network and formulate the task of mining domain terminology as transductive learning on the heterogeneous network. In the proposed approach, the manifold structure of domain-specificity inherent in query log is captured by using a novel network embedding algorithm and further exploited to reduce the need for the manual annotation efforts for domain terminology classification. We select Agriculture and Healthcare as the target domains and experiment using a real query log from a commercial search engine. Experimental results show that the proposed approach outperforms several state-of-the-art approaches.

Author(s):  
P. Monisha ◽  
R. Rubanya ◽  
N. Malarvizhi

The overwhelming majority of existing approaches to opinion feature extraction trust mining patterns for one review corpus, ignoring the nontrivial disparities in word spacing characteristics of opinion options across completely different corpora. During this research a unique technique to spot opinion options from on-line reviews by exploiting the distinction in opinion feature statistics across two corpora, one domain-specific corpus (i.e., the given review corpus) and one domain-independent corpus (i.e., the contrasting corpus). The tendency to capture this inequality called domain relevance (DR), characterizes the relevancy of a term to a text assortment. The tendency to extract an inventory of candidate opinion options from the domain review corpus by shaping a group of grammar dependence rules. for every extracted candidate feature, to have a tendency to estimate its intrinsic-domain relevancy (IDR) and extrinsic-domain relevance(EDR) scores on the domain-dependent and domain-independent corpora, severally. Natural language processing (NLP) refers to computer systems that analyze, attempt understand, or produce one or more human languages, such as English, Japanese, Italian, or Russian. Process information contained in natural language text. The input might be text, spoken language, or keyboard input. The field of NLP is primarily concerned with getting computers to perform useful and interesting tasks with human languages. The field of NLP is secondarily concerned with helping us come to a better understanding of human language


2020 ◽  
Vol 11 (1) ◽  
pp. 24
Author(s):  
Jin Tao ◽  
Kelly Brayton ◽  
Shira Broschat

Advances in genome sequencing technology and computing power have brought about the explosive growth of sequenced genomes in public repositories with a concomitant increase in annotation errors. Many protein sequences are annotated using computational analysis rather than experimental verification, leading to inaccuracies in annotation. Confirmation of existing protein annotations is urgently needed before misannotation becomes even more prevalent due to error propagation. In this work we present a novel approach for automatically confirming the existence of manually curated information with experimental evidence of protein annotation. Our ensemble learning method uses a combination of recurrent convolutional neural network, logistic regression, and support vector machine models. Natural language processing in the form of word embeddings is used with journal publication titles retrieved from the UniProtKB database. Importantly, we use recall as our most significant metric to ensure the maximum number of verifications possible; results are reported to a human curator for confirmation. Our ensemble model achieves 91.25% recall, 71.26% accuracy, 65.19% precision, and an F1 score of 76.05% and outperforms the Bidirectional Encoder Representations from Transformers for Biomedical Text Mining (BioBERT) model with fine-tuning using the same data.


2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Pilar López-Úbeda ◽  
Alexandra Pomares-Quimbaya ◽  
Manuel Carlos Díaz-Galiano ◽  
Stefan Schulz

Abstract Background Controlled vocabularies are fundamental resources for information extraction from clinical texts using natural language processing (NLP). Standard language resources available in the healthcare domain such as the UMLS metathesaurus or SNOMED CT are widely used for this purpose, but with limitations such as lexical ambiguity of clinical terms. However, most of them are unambiguous within text limited to a given clinical specialty. This is one rationale besides others to classify clinical text by the clinical specialty to which they belong. Results This paper addresses this limitation by proposing and applying a method that automatically extracts Spanish medical terms classified and weighted per sub-domain, using Spanish MEDLINE titles and abstracts as input. The hypothesis is biomedical NLP tasks benefit from collections of domain terms that are specific to clinical subdomains. We use PubMed queries that generate sub-domain specific corpora from Spanish titles and abstracts, from which token n-grams are collected and metrics of relevance, discriminatory power, and broadness per sub-domain are computed. The generated term set, called Spanish core vocabulary about clinical specialties (SCOVACLIS), was made available to the scientific community and used in a text classification problem obtaining improvements of 6 percentage points in the F-measure compared to the baseline using Multilayer Perceptron, thus demonstrating the hypothesis that a specialized term set improves NLP tasks. Conclusion The creation and validation of SCOVACLIS support the hypothesis that specific term sets reduce the level of ambiguity when compared to a specialty-independent and broad-scope vocabulary.


2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Bo Sun ◽  
Fei Zhang ◽  
Jing Li ◽  
Yicheng Yang ◽  
Xiaolin Diao ◽  
...  

Abstract Background With the development and application of medical information system, semantic interoperability is essential for accurate and advanced health-related computing and electronic health record (EHR) information sharing. The openEHR approach can improve semantic interoperability. One key improvement of openEHR is that it allows for the use of existing archetypes. The crucial problem is how to improve the precision and resolve ambiguity in the archetype retrieval. Method Based on the query expansion technology and Word2Vec model in Nature Language Processing (NLP), we propose to find synonyms as substitutes for original search terms in archetype retrieval. Test sets in different medical professional level are used to verify the feasibility. Result Applying the approach to each original search term (n = 120) in test sets, a total of 69,348 substitutes were constructed. Precision at 5 (P@5) was improved by 0.767, on average. For the best result, the P@5 was up to 0.975. Conclusions We introduce a novel approach that using NLP technology and corpus to find synonyms as substitutes for original search terms. Compared to simply mapping the element contained in openEHR to an external dictionary, this approach could greatly improve precision and resolve ambiguity in retrieval tasks. This is helpful to promote the application of openEHR and advance EHR information sharing.


2021 ◽  
Vol 30 (6) ◽  
pp. 526-534
Author(s):  
Evelina Fedorenko ◽  
Cory Shain

Understanding language requires applying cognitive operations (e.g., memory retrieval, prediction, structure building) that are relevant across many cognitive domains to specialized knowledge structures (e.g., a particular language’s lexicon and syntax). Are these computations carried out by domain-general circuits or by circuits that store domain-specific representations? Recent work has characterized the roles in language comprehension of the language network, which is selective for high-level language processing, and the multiple-demand (MD) network, which has been implicated in executive functions and linked to fluid intelligence and thus is a prime candidate for implementing computations that support information processing across domains. The language network responds robustly to diverse aspects of comprehension, but the MD network shows no sensitivity to linguistic variables. We therefore argue that the MD network does not play a core role in language comprehension and that past findings suggesting the contrary are likely due to methodological artifacts. Although future studies may reveal some aspects of language comprehension that require the MD network, evidence to date suggests that those will not be related to core linguistic processes such as lexical access or composition. The finding that the circuits that store linguistic knowledge carry out computations on those representations aligns with general arguments against the separation of memory and computation in the mind and brain.


2020 ◽  
Vol 14 (4) ◽  
pp. 471-484
Author(s):  
Suraj Shetiya ◽  
Saravanan Thirumuruganathan ◽  
Nick Koudas ◽  
Gautam Das

Accurate selectivity estimation for string predicates is a long-standing research challenge in databases. Supporting pattern matching on strings (such as prefix, substring, and suffix) makes this problem much more challenging, thereby necessitating a dedicated study. Traditional approaches often build pruned summary data structures such as tries followed by selectivity estimation using statistical correlations. However, this produces insufficiently accurate cardinality estimates resulting in the selection of sub-optimal plans by the query optimizer. Recently proposed deep learning based approaches leverage techniques from natural language processing such as embeddings to encode the strings and use it to train a model. While this is an improvement over traditional approaches, there is a large scope for improvement. We propose Astrid, a framework for string selectivity estimation that synthesizes ideas from traditional and deep learning based approaches. We make two complementary contributions. First, we propose an embedding algorithm that is query-type (prefix, substring, and suffix) and selectivity aware. Consider three strings 'ab', 'abc' and 'abd' whose prefix frequencies are 1000, 800 and 100 respectively. Our approach would ensure that the embedding for 'ab' is closer to 'abc' than 'abd'. Second, we describe how neural language models could be used for selectivity estimation. While they work well for prefix queries, their performance for substring queries is sub-optimal. We modify the objective function of the neural language model so that it could be used for estimating selectivities of pattern matching queries. We also propose a novel and efficient algorithm for optimizing the new objective function. We conduct extensive experiments over benchmark datasets and show that our proposed approaches achieve state-of-the-art results.


2020 ◽  
Author(s):  
Geoffrey Schau ◽  
Erik Burlingame ◽  
Young Hwan Chang

AbstractDeep learning systems have emerged as powerful mechanisms for learning domain translation models. However, in many cases, complete information in one domain is assumed to be necessary for sufficient cross-domain prediction. In this work, we motivate a formal justification for domain-specific information separation in a simple linear case and illustrate that a self-supervised approach enables domain translation between data domains while filtering out domain-specific data features. We introduce a novel approach to identify domainspecific information from sets of unpaired measurements in complementary data domains by considering a deep learning cross-domain autoencoder architecture designed to learn shared latent representations of data while enabling domain translation. We introduce an orthogonal gate block designed to enforce orthogonality of input feature sets by explicitly removing non-sharable information specific to each domain and illustrate separability of domain-specific information on a toy dataset.


2018 ◽  
Vol 6 ◽  
pp. 269-285 ◽  
Author(s):  
Andrius Mudinas ◽  
Dell Zhang ◽  
Mark Levene

There is often the need to perform sentiment classification in a particular domain where no labeled document is available. Although we could make use of a general-purpose off-the-shelf sentiment classifier or a pre-built one for a different domain, the effectiveness would be inferior. In this paper, we explore the possibility of building domain-specific sentiment classifiers with unlabeled documents only. Our investigation indicates that in the word embeddings learned from the unlabeled corpus of a given domain, the distributed word representations (vectors) for opposite sentiments form distinct clusters, though those clusters are not transferable across domains. Exploiting such a clustering structure, we are able to utilize machine learning algorithms to induce a quality domain-specific sentiment lexicon from just a few typical sentiment words (“seeds”). An important finding is that simple linear model based supervised learning algorithms (such as linear SVM) can actually work better than more sophisticated semi-supervised/transductive learning algorithms which represent the state-of-the-art technique for sentiment lexicon induction. The induced lexicon could be applied directly in a lexicon-based method for sentiment classification, but a higher performance could be achieved through a two-phase bootstrapping method which uses the induced lexicon to assign positive/negative sentiment scores to unlabeled documents first, a nd t hen u ses those documents found to have clear sentiment signals as pseudo-labeled examples to train a document sentiment classifier v ia supervised learning algorithms (such as LSTM). On several benchmark datasets for document sentiment classification, our end-to-end pipelined approach which is overall unsupervised (except for a tiny set of seed words) outperforms existing unsupervised approaches and achieves an accuracy comparable to that of fully supervised approaches.


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