Morphological and phylogenetic relations of members of the genus Coelastrella (Scenedesmaceae, Chlorophyta) from the Ural and Khentii Mountains (Russia, Mongolia)

Phytotaxa ◽  
2021 ◽  
Vol 527 (1) ◽  
pp. 1-20
Author(s):  
IRINA V. NOVAKOVSKAYA ◽  
IRINA N. EGOROVA ◽  
NINA V. KULAKOVA ◽  
ELENA N. PATOVA ◽  
DMITRY M. SHADRIN ◽  
...  
Keyword(s):  
Phenotypic Variability ◽  
Phylogenetic Analyses ◽  
Terrestrial Ecosystems ◽  
Culture Collection ◽  
Ural Mountains ◽  
Phylogenetic Relations ◽  
Green Algal ◽  
Algal Group ◽  
Physiology And Biochemistry ◽  
A New Species

We describe the morphological features and the phylogenetic relationships of five morphologically similar strains belonging to the genus Coelastrella, which live in different ecological and geographical conditions of terrestrial ecosystems: in the Ural Mountains (Polar, Subpolar, and Northern Urals of Russia) and the Khentii Mountains (Russia and Mongolia). We analysed algal strains stored in the Culture Collection of Algae of the Institute of Biology, Syktyvkar, Russia (SYKOA Ch-045-09, SYKOA Ch-047-11, SYKOA Ch-072-17) and the Culture Collection of Algae at Herbarium of the Siberian Institute of Plant Physiology and Biochemistry, Irkutsk, Russia (IRK-A 2, IRK-A 173). By light microscopy, all samples were assigned to Coelastrella terrestris. However, the phylogenetic analyses based on the nucleotide sequences of 18S rDNA and ITS1-ITS2 showed that only one strain belongs to C. terrestris (IRK-A 173). Other samples were closer to C. oocystiformis (SYKOA Ch-045-09; IRK-A 2) and C. aeroterrestrica (SYKOA Ch-047-11). The strain SYKOA Ch-072-17 is probably a new species for the genus. These results confirmed the high phenotypic variability and the hidden diversity among the members of this green algal group.

Morphology and molecular phylogeny of representatives of the genus Coelastrella Chodat from the Urals and Khentei mountain systems

2021 ◽  
pp. 93-97
Author(s):  
Irina V. Novakovskaya ◽  
Irina N. Egorova ◽  
Nina V. Kulakova ◽  
Elena N. Patova
Keyword(s):  
Plant Physiology ◽  
New Species ◽  
Molecular Phylogeny ◽  
18S Rdna ◽  
Phenotypic Variability ◽  
Morphological Similarity ◽  
The Urals ◽  
Physiology And Biochemistry ◽  
Mountain Systems ◽  
A New Species

Five strains of the genus Coelastrella were studied from the collections of live cultures of algae of the Institute of Biology, Syktyvkar, Russia (SYKOA Ch-045-09, SYKOA Ch-047-11, SYKOA Ch-072-17) and the Siberian Institute of Plant Physiology and Biochemistry, Irkutsk, Russia (IRK-A 2, IRK-A 173). It was found that, despite their high morphological similarity, the strains have different phylogenetic relationships. The analysis of the 18S rDNA and ITS1-ITS2 showed that the studied strains belong to the species: C. terrestris (IRK-A 173), C. oocystiformis (SYKOA Ch-045-09; IRK-A 2) and C. aeroterrestrica (SYKOA Ch-047-11). The SYKOA Ch-072-17 strain is probably a new species for the genus. The results confirm the high phenotypic variability and hidden diversity among the representatives of this group of green algae.

scholarly journals Molecular Evidence for the Wide Distribution of Two Lineages of Terrestrial Green Algae (Chlorophyta) over Tropics to Temperate Zone

ISRN Ecology ◽  
2012 ◽  
Vol 2012 ◽  
pp. 1-9 ◽  
Author(s):  
Ladislav Hodač ◽  
Christine Hallmann ◽  
Helen Rosenkranz ◽  
Fabian Faßhauer ◽  
Thomas Friedl
Keyword(s):  
Phylogenetic Analyses ◽  
Wide Distribution ◽  
Tree Bark ◽  
Close Relative ◽  
Molecular Evidence ◽  
European Origin ◽  
Rdna Sequences ◽  
Green Algal ◽  
18S Rdna Sequences ◽  
A New Species

Phylogenetic analyses of 18S rDNA sequences from environmental clones and culture strains revealed a widespread distribution of two subaerial green algal lineages, Jenufa and Xylochloris, recently described from rainforests in southeast Asia. A new lineage of Jenufa (Chlorophyceae), most closely related to or even conspecific with J. minuta, was formed by sequences of European origin. Two more lineages of Jenufa were formed by three additional sequences from Ecuador and Panama. The other lineage was a close relative of Xylochloris irregularis (Trebouxiophyceae), probably representing a new species of the genus and distinct from the only so far described species, X. irregularis. It comprised two distinct clades each containing almost identical sequences from Germany and Ecuador. Analyses of the new sequences for both genera allowed to presume a preference of J. minuta to subaerial growth on rock or artificial hard substrates combined with a remarkable adaptation to extended periods of darkness, whereas Xylochloris may preferably occur on tree bark or in the soil.

scholarly journals Choricystis and Lewiniosphaera gen. nov. (Trebouxiophyceae Chlorophyta), two different green algal endosymbionts in freshwater sponges

Symbiosis ◽  
2020 ◽  
Vol 82 (3) ◽  
pp. 175-188
Author(s):  
Thomas Pröschold ◽  
Tatyana Darienko
Keyword(s):  
Green Algae ◽  
Phylogenetic Analyses ◽  
Wide Distribution ◽  
Phylogenetic Position ◽  
Freshwater Sponges ◽  
Culture Collections ◽  
Rdna Sequences ◽  
Green Algal ◽  
Long Time ◽  
A New Species

Associations of freshwater sponges with coccoid green algae have been known for a long time. Two types of coccoid green algae, which are commonly assigned as zoochlorellae, are recognized by morphology: small coccoids (< 3 μm) without pyrenoids and larger Chlorella-like algae (4–6 μm) with pyrenoids. Despite their wide distribution in some freshwater sponges, these green algae were never studied using a combined analysis of morphology and molecular phylogeny. We investigated several endosymbiotic strains isolated from different Spongilla species, which were available in culture collections. Phylogenetic analyses of SSU and ITS rDNA sequences revealed that the strain SAG 211-40a is a member of the Chlorellaceae and represents a new species of the newly erected genus Lewiniosphaera, L symbiontica. The phylogenetic position was confirmed by morphology and ITS-2 barcode. The endosymbionts without pyrenoid were identified as Choricystis parasitica by morphology and phylogenetic analyses. The comparison with free-living strains revealed the recognition of two new Choricystis species, C. krienitzii and C. limnetica, which were confirmed by molecular signatures in V9 region of SSU rDNA and ITS-2 barcode.

Ellipsomyxa ariusi sp. nov. (Myxosporea: Ceratomyxidae), a new myxosporean infecting the gallbladder of threadfin sea catfish Arius arius in India

2020 ◽  
Vol 142 ◽  
pp. 83-97
Author(s):  
A Chandran ◽  
PU Zacharia ◽  
TV Sathianandan ◽  
NK Sanil
Keyword(s):  
Phylogenetic Analyses ◽  
Type Specimen ◽  
Ssu Rdna ◽  
Fish Host ◽  
Present Species ◽  
Epithelial Layer ◽  
Histopathological Changes ◽  
Mucus Production ◽  
High Bootstrap ◽  
A New Species

The present study describes a new species of myxosporean, Ellipsomyxa ariusi sp. nov., infecting the gallbladder of the threadfin sea catfish Arius arius (Hamilton, 1822). E. ariusi sp. nov. is characterized by bivalvular, ellipsoid or elongate-oval myxospores with smooth spore valves and a straight suture, arranged at an angle to the longitudinal spore axis. Mature myxospores measured 10.1 ± 0.8 µm in length, 6.8 ± 0.5 µm in width and 7.7 ± 0.7 µm in thickness. Polar capsules are equal in size and oval to pyriform in shape. They are positioned at an angle to the longitudinal myxospore axis and open in opposite directions. Polar capsules measured 2.8 ± 0.3 µm in length and 2.5 ± 0.4 µm in width; polar filaments formed 4-5 coils, and extended to 32.2 ± 2.1 µm in length. Monosporic and disporic plasmodial stages attached to the wall of gallbladder. Molecular analysis of the type specimen generated a 1703 bp partial SSU rDNA sequence (MN892546), which was identical to the isolates from 3 other locations. In phylogenetic analyses, genus Ellipsomyxa appeared monophyletic and E. ariusi sp. nov. occupied an independent position in maximum likelihood and Bayesian inference trees with high bootstrap values. The overall prevalence of infection was 54.8% and multiway ANOVA revealed that it varied significantly with location, year, season, sex and size of the fish host. Histopathological changes associated with E. ariusi sp. nov. infection included swelling, vacuolation and detachment of epithelial layer, reduced mucus production and altered consistency and colour of bile. Based on the morphologic, morphometric and molecular differences with known species of Ellipsomyxa, and considering differences in host and geographic locations, the present species is treated as new and the name Ellipsomyxa ariusi sp. nov. is proposed.

scholarly journals Outbreak of Leaf Spot and Fruit Rot in Florida Strawberry Caused by Neopestalotiopsis spp.

Plant Disease ◽  
2021 ◽  
pp. PDIS-06-20-1290
Author(s):  
Juliana S. Baggio ◽  
Bruna B. Forcelini ◽  
Nan-Yi Wang ◽  
Rafaela G. Ruschel ◽  
James C. Mertely ◽  
...  
Keyword(s):  
Internal Transcribed Spacer ◽  
Phylogenetic Analyses ◽  
Morphological Characteristics ◽  
Taxonomic Status ◽  
Spore Production ◽  
Potato Dextrose Agar ◽  
Fruit Rot ◽  
Low Genetic Diversity ◽  
Pathogenicity Tests ◽  
A New Species

Pestalotiopsis-like species have been reported affecting strawberry worldwide. Recently, severe and unprecedented outbreaks have been reported in Florida commercial fields where leaf, fruit, petiole, crown, and root symptoms were observed, and yield was severely affected. The taxonomic status of the fungus is confusing because it has gone through multiple reclassifications over the years. Morphological characteristics, phylogenetic analyses, and pathogenicity tests were evaluated for strawberry isolates recovered from diseased plants in Florida. Phylogenetic analyses derived from the combined internal transcribed spacer, β-tub, and tef1 regions demonstrated that although there was low genetic diversity among the strawberry isolates, there was a clear separation of the isolates in two groups. The first group included isolates recovered over a period of several years, which was identified as Neopestalotiopsis rosae. Most isolates recovered during the recent outbreaks were genetically different and may belong to a new species. On potato dextrose agar, both groups produced white, circular, and cottony colonies. From the bottom, colonies were white to pale yellow for Neopestalotiopsis sp. and pale luteous to orange for N. rosae. Spores for both groups were five-celled with three median versicolored cells. Mycelial growth and spore production were higher for the new Neopestalotiopsis sp. isolates. Isolates from both groups were pathogenic to strawberry roots and crowns. However, the new Neopestalotiopsis sp. proved more aggressive in fruit and leaf inoculation tests, confirming observations from the recent outbreaks in commercial strawberry fields in Florida.

Steinernema borjomiense n. sp. (Rhabditida: Steinernematidae), a new entomopathogenic nematode from Georgia

Nematology ◽  
2018 ◽  
Vol 20 (7) ◽  
pp. 653-669 ◽  
Author(s):  
Oleg Gorgadze ◽  
Elena Fanelli ◽  
Manana Lortkhipanidze ◽  
Alberto Troccoli ◽  
Medea Burjanadze ◽  
...  
Keyword(s):  
New Species ◽  
18S Rrna ◽  
Entomopathogenic Nematode ◽  
Phylogenetic Analyses ◽  
Tail Length ◽  
Morphological Characters ◽  
18S Rrna Gene ◽  
The Body ◽  
Rrna Gene ◽  
A New Species

Summary A new species of entomopathogenic nematode, Steinernema borjomiense n. sp., was isolated from the body of the host insect, Oryctes nasicornis (Coleoptera: Scarabaeidae), in Georgia, in the territory of Borjomi-Kharagauli. Morphological characters indicate that the new species is closely related to species of the feltiae-group. The infective juveniles are characterised by the following morphological characters: body length of 879 (777-989) μm, distance between the head and excretory pore = 72 (62-80) μm, pharynx length = 132 (122-142) μm, tail length = 70 (60-80) μm, ratio a = 26.3 (23.0-29.3), H% = 45 (40-51), D% = 54 (47-59), E% = 102 (95-115), and lateral fields consisting of seven ridges (eight incisures) at mid-body. Steinernema borjomiense n. sp. was molecularly characterised by sequencing three ribosomal regions (the ITS, the D2-D3 expansion domains and the 18S rRNA gene) and the mitochondrial COI gene. Phylogenetic analyses revealed that S. borjomiense n. sp. differs from all other known species of Steinernema and is a member of the monticolum-group.

A new species of Cyrtodactylus (Squamata: Gekkonidae) from Ninh Thuan Province, southern Vietnam

Zootaxa ◽  
2021 ◽  
Vol 4999 (1) ◽  
pp. 58-76
Author(s):  
Quyen Hanh Do ◽  
TRUNG MY PHUNG ◽  
HANH THI NGO ◽  
MINH DUC LE ◽  
THOMAS ZIEGLER ◽  
...  
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Coi Gene ◽  
Unique Combination ◽  
Mitochondrial Coi ◽  
Southern Vietnam ◽  
Mitochondrial Coi Gene ◽  
Morphological Differences ◽  
Dorsal Pattern ◽  
A New Species

A new species of the Cyrtodactylus irregularis group is described from Ninh Thuan Province, southern Vietnam based on molecular divergence and morphological differences. Cyrtodactylus orlovi sp. nov. is distinguished from the remaining Indochinese bent-toed geckos by having the unique combination of the following characters: size medium (SVL 61.0–77.7 mm); dorsal tubercles in 16–20 irregular rows; 36–39 ventral scale rows; precloacal pores absent in females, 5 or 6 in males, in a continuous row; femoral pores absent; 3–8 enlarged femoral scales; postcloacal spurs 1 or 2; lamellae under toe IV 16–19; a continuous neckband; a highly irregular transverse banded dorsal pattern; the absence of transversely enlarged median subcaudal scales. In phylogenetic analyses, the new species was revealed to be the sister taxon to a clade consisting of Cyrtodactylus cattienensis and the most recently described species from Vietnam, C. chungi, with 12.1–12.4% and 11.7 % pairwise genetic divergence from the two species, respectively, based on a fragment of the mitochondrial COI gene.  

Tigridiopalma longmenensis (Melastomataceae), a new species from Guangdong, China

Phytotaxa ◽  
2021 ◽  
Vol 500 (3) ◽  
pp. 241-247
Author(s):  
HUI-FENG WANG ◽  
ZHENG-FENG WANG ◽  
QIAO-MEI QIN ◽  
HONG-LIN CAO ◽  
XIAO-MING GUO
Keyword(s):  
New Species ◽  
Chloroplast Genome ◽  
Phylogenetic Analyses ◽  
Monotypic Genus ◽  
Distribution Map ◽  
Complete Chloroplast Genome ◽  
Chloroplast Genomes ◽  
A New Species

Tigridiopalma longmenensis, a new species from Guangdong, China, is described. This species differs from its ally, T. magnifica, by the polychasium consisting of scorpioid cymes, hypanthium with carinas on angles, and longer stamens with a conspicuously white or pink spur at the connective base of anther. A diagnosis and a distribution map of the two species are also provided. The complete chloroplast genome of T. longmenensis was reported here. Phylogenetic analyses based on complete chloroplast genomes from T. longmenensis and other 15 Melastomataceae species indicated that T. longmenensis is sister to T. magnifica. The discovery of T. longmenensis terminates Tigridiopalma as a monotypic genus.

A new species of Psammophis (Serpentes: Psammophiidae) from the Turpan Basin in northwest China

Zootaxa ◽  
2021 ◽  
Vol 4974 (1) ◽  
pp. 116-134
Author(s):  
MINLI CHEN ◽  
JINLONG LIU ◽  
BO CAI ◽  
JUN LI ◽  
NA WU ◽  
...  
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Northwest China ◽  
Genetic Differences ◽  
Cytb Gene ◽  
Turpan Basin ◽  
Morphological Differences ◽  
A New Species

An adult sand snake specimen was collected during a herpetofaunal survey conducted in the Turpan Basin in northwest China. Phylogenetic analyses revealed that this specimen, along with other snake sloughs and skins collected from different localities in the Turpan Basin formed a clade that is sister to Psammophis lineolatus. This taxon exhibited substantial divergence from its congeners (P. lineolatus and P. condanarus) with uncorrelated p-distances ranging from 11.9 ± 0.9% to 15.8 ± 1.6% for the ND4 gene and from 10.2 ± 0.8% to 13.8 ± 1.1% for the Cytb gene. Given the genetic differences along with morphological differences, we describe the specimen from the Turpan Basin as Psammophis turpanensis sp. nov. We provide detailed morphological descriptions, and compare this specimen with five Asian sand snakes and the Afro-Asian Sand Snake, P. schokari. In addition, we provide brief comments on the biogeography of Psammophis in China. 

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