Gene Therapy for Severe Combined Immunodeficiency X1.

Blood ◽  
2005 ◽  
Vol 106 (11) ◽  
pp. 195-195 ◽  
Author(s):  
S. Hacein-Bey-Abina ◽  
M. Schmidt ◽  
F. Le Deist ◽  
A. Garrigue ◽  
A. Borkhardt ◽  
...  

Abstract We have previously reported that ex vivo retroviraly-mediated gc gene transfer into CD34 (+) bone marrow precursor cells led to the correction of the immunodeficiency in 9 out of 10 patients with X-linked severe combined immunodeficiency. Follow-up now reaches more that 6 years for the first 2 treated patients. Patients’immune function has been restored. The distribution of both TCR Vb family usage and TCR Vb CDR3 length still reveals a broadly diversified T cell repertoire. Moreover 6 years after treatment the thymus is still seeded by transduced progenitor cells as attested by the presence of TRECS in peripheral blood RTE. Among these patients, three (P4, P5 and P10) developed at 30 to 34 months after gene therapy a monoclonal T cell proliferation requiring a chemotherapy. P4 received also an allogenic HSCT from a MUD but died 26 months after the occurence of the lymphoproliferation. For P5 and P10, chemotherapy has led to an overall control of the clonal proliferation. These two patients are doing well and P5 is off treatment with a good immunological recovery. Genetic analysis of the blastic cells showed that in the two first cases the vector had integrated within or upstream of the LMO2 locus causing an insertional activation of LMO2 transcription. The last case revealed the involvement of several targeted sites, but their exact contribution to the lymphoproliferation is still under investigation. The repeated involvment of LMO2 as a site of vector integration in the proliferating T-cells points to an insertional activation of this gene as at least one of the causes of the oncogenic process. However, the long latency observed in all cases (> 30 months) suggests that additional “hits” have been required for overt desease. Synergy with gc expression and thereby induced proliferative signals (explaining occurrence in SCID-X1 patients only) is the most obvious hypothesis which we are trying to analyse in a mouse model. A deep analysis of retroviral integration patterns has been performed on patients’PBMCS by LAM-PCR to estimate the frequency of potentially harmful integration events and to assess the risk factors associated with the LTR’s strong enhancer effect of the MLV-based retroviral vector. 708 unique integration sites (IS) have been obtained from all analysed patients post-gene therapy and among them, 577 could be mapped unequivocally to the human genome. *Most of these insertions (63%) are located in the vicinity of 10kb or within the coding sequence of a known gene*. A significant peak of insertion frequency is related closely to the transcription strart site *among the 577 IS, 43 are common integration sites. Among the latter, we found out a high selection of genes involved in human oncogenic process.

2011 ◽  
Vol 3 (97) ◽  
pp. 97ra79-97ra79 ◽  
Author(s):  
H. B. Gaspar ◽  
S. Cooray ◽  
K. C. Gilmour ◽  
K. L. Parsley ◽  
S. Adams ◽  
...  

Blood ◽  
2010 ◽  
Vol 115 (22) ◽  
pp. 4356-4366 ◽  
Author(s):  
Gary P. Wang ◽  
Charles C. Berry ◽  
Nirav Malani ◽  
Philippe Leboulch ◽  
Alain Fischer ◽  
...  

Abstract X-linked severe-combined immunodeficiency (SCID-X1) has been treated by therapeutic gene transfer using gammaretroviral vectors, but insertional activation of proto-oncogenes contributed to leukemia in some patients. Here we report a longitudinal study of gene-corrected progenitor cell populations from 8 patients using 454 pyrosequencing to map vector integration sites, and extensive resampling to allow quantification of clonal abundance. The number of transduced cells infused into patients initially predicted the subsequent diversity of circulating cells. A capture-recapture analysis was used to estimate the size of the gene-corrected cell pool, revealing that less than 1/100th of the infused cells had long-term repopulating activity. Integration sites were clustered even at early time points, often near genes involved in growth control, and several patients harbored expanded cell clones with vectors integrated near the cancer-implicated genes CCND2 and HMGA2, but remain healthy. Integration site tracking also documented that chemotherapy for adverse events resulted in successful control. The longitudinal analysis emphasizes that key features of transduced cell populations—including diversity, integration site clustering, and expansion of some clones—were established early after transplantation. The approaches to sequencing and bioinformatics analysis reported here should be widely useful in assessing the outcome of gene therapy trials.


Blood ◽  
2004 ◽  
Vol 104 (11) ◽  
pp. 410-410 ◽  
Author(s):  
Javier Chinen ◽  
Jennifer M. Puck ◽  
Joie Davis ◽  
Gilda F. Linton ◽  
Narda L. Whiting-Theobald ◽  
...  

Abstract X-linked severe combined immunodeficiency (XSCID) results from mutations in IL2RG, which encodes the common gamma chain (γc) shared by receptors for IL-2, 4, 7, 9, 15 and 21. XSCID is best treated with bone marrow transplantation (BMT) from an HLA-matched sibling. Patients lacking a matched sibling can benefit from a T-cell depleted haploidentical BMT, but some do not achieve adequate immune reconstitution. Ex vivo autologous hematopoietic stem cell (HSC) gene therapy may be an alternative to haploidentical BMT. In a French trial, 9 of 10 XSCID infants had immune reconstitution following ex vivo transduction of autologous HSC with a retroviral vector encoding γc. Selective development and expansion of T, NK and B cells from progenitors expressing γc was important to the success of this therapy. However, the 2 youngest patients, treated at 1 and 3 months of age, later developed T cell leukemias associated with retrovirus insertions that activated the LMO2 transcription factor. Young age at treatment might have had a role in the development of these adverse events. We have developed an XSCID gene transfer protocol as salvage treatment for older patients who have failed haploidentical BMT. An 11 year-old XSCID patient with no detectable engraftment from prior haploidentical BMTs had lymphocytopenia, growth failure, infections, chronic diarrhea and skin rashes. After G-CSF mobilization and harvest by apheresis, his purified autologous peripheral blood CD34+ cells were transduced daily for 4 days with GALV-MFGS-γc retrovirus in the presence of growth factors and Retronectin®. Eighty million cells/kg (80% CD34+; 40% γc transgene positive) were reinfused. At 1, 2 and 3 months after treatment, provirus marking by PCR of unseparated blood leukocytes was 1.4%, 2.3% and <0.01%, respectively. At 4.5 months, marking reappeared in lineages dependent on IL2RG expression: 0.5% in T cells, 0.1% in NK cells and 0.05% in B cells. This lineage-specific marking persisted at the same level at 6 months. LAM PCR showed polyclonal marking. T-lymphocytes have not yet increased above 300/μl. However, from 2 months after gene therapy the patient experienced a sustained improvement in well-being with resolution of lifelong diarrhea and rashes. No infections have occurred except one episode of otitis externa 3 months post therapy that resolved promptly to oral antibiotics. At six months submandibular lymph nodes were palpable for the first time in his life. Thymus size on chest CT images increased from 1.8 cm3 to 3.2 cm3. Additional follow up is necessary to know if gene marking and clinical improvement persist and if significant expansion of corrected lymphocytes occurs. Our preliminary results suggest that ex vivo retrovirus-mediated gene therapy, targeting CD34+ cells from peripheral blood, may benefit older children with XSCID who have failed haploidentical BMT.


2011 ◽  
Vol 142 (1-2) ◽  
pp. 36-48 ◽  
Author(s):  
Douglas R. Kennedy ◽  
Brian J. Hartnett ◽  
Jeffrey S. Kennedy ◽  
William Vernau ◽  
Peter F. Moore ◽  
...  

2018 ◽  
Vol 10 (1) ◽  
Author(s):  
Erik L. Clarke ◽  
A. Jesse Connell ◽  
Emmanuelle Six ◽  
Nadia A. Kadry ◽  
Arwa A. Abbas ◽  
...  

Blood ◽  
2004 ◽  
Vol 104 (11) ◽  
pp. 1744-1744
Author(s):  
Frank A. Giordano ◽  
Stephanie Laufs ◽  
Katalin Z. Nagy ◽  
Boris Fehse ◽  
Agnes Hotz-Wagenblatt ◽  
...  

Abstract Retroviral vectors encoding the herpes simplex thymidine kinase gene (HSV-Tk) have been employed to render T-lymphocytes (TLCs) sensitive to the prodrug ganciclovir. Such genetically modified T cells have been used for adoptive immunotherapy in the context of allogeneic hematopoietic stem cell transplantation (SCT). Infused T cells have been shown to be susceptible to elimination through exposure to ganciclovir in the event of graft-versus-host disease (GvHD). Recent reports on insertional “genotoxicity” in a mouse gene marking study and a clinical gene therapy trial for X-chromosomal severe combined immunodeficiency (X-SCID) reminded us the actual risk of insertional oncogene activation and subsequent leukemia development. Here we investigated retroviral integration sites in donor TLCs transduced with the MoLV-based TK/neoR vector Mo3TIN of four donors in a clinical HSV-Tk study. A total of 114 retroviral integration sites were detected using highly sensitive and specific ligation-mediated PCR (LM-PCR). 41.2% of all integrations appeared near the transcription start regions (+/−10kb) of genes. Further analysis showed that 57 (50%) of all integrations targeted RefSeq genes. 24 of those appeared in intron 1 (42% of all integrations into genes) while 18% (10/57) of all integrations into genes landed in exon sequences whereas 6 hit the first exon. 18 of the targeted genes (15.8% of all integrations) could be at last assigned to signal transduction pathways, whereas the transcription factor family was afflicted 13 times (11.4% of all integrations). The zinc ion binding group makes up 4 (resp. 6, minding that GTF2HII contains a C2H2 type and KIAA0427 a C-x8-C-x5-C-x3-H-type zinc finger) of them. Among the targeted genes we found integrations into the CD8, CD100, CD44, CX3CR1, HLA-DMP and IL10-receptor genes. Within at a range of 5kb up- and 5kb downstream of vector integrations 15 genes were located that were not hit. 5 are known as transcription factors, whereas two of those are involved in leukemia, namely the homo sapiens myeloid/lymphoid or mixed-lineage leukemia 5 gene (MLL5) and the homo sapiens ALL1 fused gene from 5q31 (AF5Q31). Hit genes are currently examined more systematically in terms of function, e.g. involvement in signal transduction and transcription promoting processes. RISC (Retroviral Insertion estimate of Chromosomal Integration) scores and integration specific data will be submitted to a data warehouse, the collaborative RISC score database (CRSD). Such a systematic data collection similar to the IBMTR or EBMT databases will allow to recognize factors contributing to the safety, optimal transgene expression and persistence of transduced cells in the setting of allogenic matched donor transplantation.


2002 ◽  
Vol 346 (16) ◽  
pp. 1185-1193 ◽  
Author(s):  
Salima Hacein-Bey-Abina ◽  
Françoise Le Deist ◽  
Frédérique Carlier ◽  
Cécile Bouneaud ◽  
Christophe Hue ◽  
...  

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