Decanucleotide Insertion Polymorphism of F7 Influences Significantly the Risk of Thrombosis in Patients with Essential Thrombocythemia

Blood ◽  
2012 ◽  
Vol 120 (21) ◽  
pp. 1730-1730
Author(s):  
Veronika Buxhofer-Ausch ◽  
Damla Olcaydu ◽  
Bettina Gisslinger ◽  
Martin Schalling ◽  
Sophie Frantal ◽  
...  

Abstract Abstract 1730 Thrombosis is one of the main complications observed in patients with myeloproliferative neoplasm (MPN). The underlying mechanisms of thrombosis are not entirely clarified. The incidence of, and risk factors for, thrombosis appear to differ in distinct and accurately diagnosed sub-entities of MPN. Similar incidences have been reported for essential thrombocythemia (ET) and prefibrotic primary myelofibrosis (PMF) diagnosed according to the WHO 2008 criteria. However, the two sub-entities differ in terms of their risk factor profiles (Carobbio et al, Blood 2011; Buxhofer-Ausch et al, Am J Haematol 2012). A gain of function in procoagulant pathways is believed to be the reason for an inherited hypercoagulable state (Anderson et al, Crit Care Clin 2011). There is strong evidence indicating that certain thrombophilic single nucleotide polymorphisms account for increased risk of thrombotic complications (Di Castelnuovo et al, Thromb Res 2000; Shimasaki et al, J Am Coll Cardiol 1998; Elbaz et al, Stroke 2000; Mollaki et al, J Thromb Haemost 2004). Data concerning the impact of an inherited risk in patients with underlying MPN are scarce (Shetty, Thromb Res 2011). We aimed to investigate the influence of three pre-selected thrombophilic single nucleotide polymorphisms (SNPs) on the risk of thrombosis in patients diagnosed with ET or prefibrotic PMF according to the WHO 2008 criteria. In 167 patients with a valid consensus diagnosis of ET (n= 105) or prefibrotic PMF (n= 62), the thrombophilic SNPs of NOS3 (Glu 298 Asp), F7 (10 nucleotide insertion-deletion) and FCGR2A (His 131 Arg) were determined by AS-PCR or sequencing. These variables and certain disease-specific and laboratory parameters were correlated with the incidence of major arterial and venous thrombosis by using Cox-regression analysis. The latter was performed in the entire population as well as separately for ET and prefibrotic PMF. The frequency of SNPs of F7, NOS3 and FCGR2A did not differ significantly in ET and prefibrotic PMF. Notably, the homo- or heterozygous insertion variant of F7 was found to be a significant (multivariate analysis) risk factor for total thrombosis and arterial thrombosis in the entire population (HR 3.06, p= 0.0082 and HR 3.94, p= 0.0007, respectively) as well as on separate analysis of those patients with ET (HR 5.94, p= 0.001 and HR 9,47, p= 0.00024, respectively). The homozygous 298 Asp NOS variant was significantly (univariate analysis) associated with total thrombosis in the entire population (HR 3.29, p= 0.0257) as well as on separate analysis of the ET cohort (HR 4.739, p= 0.0161). These significances were lost on multivariate analysis. No significant associations were established with any of the tested thrombophilic SNPs and the risk of thrombosis in the prefibrotic PMF cohort. Our data show that the risk of thrombosis in ET diagnosed according to WHO 2008 is increased many-fold by the inherited insertion polymorphism of F7. This is very interesting because, in patients without an underlying pathological condition, this polymorphism appears to protect the organism against thrombosis by reducing FVII activity (Humphries et al, Thromb Haemost 1996). Moreover, the different impact of thrombophilic SNPs in ET compared to prefibrotic PMF might provide further evidence of the presumed difference in risk profiles between these two sub-entities of MPN. These data emphasize the importance of considering the inherited as well as acquired hypercoagulable state in patients with MPN. Larger studies are needed to confirm these findings. If proven true, we would be able to more accurately define the risk of thrombosis in an individual patient and subsequently tailor treatment and anticoagulation strategies. Disclosures: No relevant conflicts of interest to declare.

2019 ◽  
Vol 3 (s1) ◽  
pp. 10-11
Author(s):  
Ariel Gonzalez-Cordero ◽  
Jorge Duconge-Soler ◽  
Ángel López-Candales

OBJECTIVES/SPECIFIC AIMS: Consequently, we have decided to evaluate the presence of single nucleotide polymorphism (SNP) previously associated with AF on a European-descent population in an attempt to first identify the most common loci present in the PRH population and then search for specific PRH SNP associated with AF. METHODS/STUDY POPULATION: A secondary analysis of a Puerto Rican population sample (n = 120) from The Pharmacogenetics of Warfarin in Puerto Ricans Study will be performed. We will implement data from the 1000 genome project to establish a control group of healthy PRH population. Will evaluate the presence of 111 known single nucleotide polymorphisms associated with AF in Europeans and determine the frequency in PRH population sample, and validate predictability of such SNPs. Using admixture informatic markers (AIM) analysis will determine the percentage of admixture by Yoruba, Native American and Iberic-European. Statistical analysis will include the use of the Pearson Product-Moment Coefficient correlation analysis and multivariate linear regression. For admixture will use Maximum Likelihood Estimation and Markov Chain Monte Carlo models. RESULTS/ANTICIPATED RESULTS: A higher frequency of AF associated European single nucleotide polymorphisms, and an overall higher percentage of European admixture will be associated with atrial fibrillation in Puerto Rican Hispanic patients. DISCUSSION/SIGNIFICANCE OF IMPACT: Our contributions here are expected to be the elucidation of European ancestry as a risk factor for AF. These contributions will be significant because it can provide a robust scientific basis for larger GWAS studies in the Puerto Rican community and further narrow down the mechanism specific to this population. Research in this subject could lead to early identification of patients with high risk of developing atrial fibrillation and further decrease incidence and disease burden in the PRH population. Puerto Rican Hispanics have an exclusive genetic admixture that makes for an appealing research subject that could deliver unique results.


Blood ◽  
2008 ◽  
Vol 112 (11) ◽  
pp. 3646-3646
Author(s):  
Aric Parnes ◽  
Sarah Nikiforow ◽  
Nancy Berliner ◽  
K. Gary J. Vanasse

Abstract A phenotypic hallmark of the myelodysplastic syndromes (MDS) is ineffective hematopoiesis, resulting in anemia, neutropenia, and thrombocytopenia. The extent to which the stromal microenvironment interacts with MDS progenitors to influence the natural history of the disease is unknown. A number of proinflammatory cytokines, including TNFα, and IL-6, are increased in MDS patients versus normal subjects. In addition, the TNF and IL-6 genes have functional single nucleotide polymorphisms (SNPs) that are linked to cytokine hypersecretion. However, the influence of these SNPs on the MDS phenotype remains poorly defined. Our central hypothesis is that both cell autonomous and cell non-autonomous factors cooperate to define the MDS phenotype. We postulate that underlying host factors do not predispose to the development of MDS but act as genetic modifiers of disease severity, particularly with regard to the degree of cytopenias, severity of infectious complications, and disease progression. In the current study, we analyzed the frequency of the TNFα -308G/A and -238G/A, IL-6 -174G/C, and macrophage migration inhibitory factor (MIF) -173G/C and -794 CATT repeat promoter region polymorphisms and determined whether these SNPs were associated with adverse clinical and laboratory outcomes in a large cohort of MDS patients. Genotype analysis on DNA samples from 328 MDS patients was performed and the respective TNF, IL-6 and MIF haplotype frequencies were correlated with the following outcomes: age, IPSS score, karyotype, blast percentage, FAB classification, survival, anemia, neutropenia, and thrombocytopenia. As shown in Table 1, multivariate analysis of the TNFα -308G/A SNP revealed that the AA genotype (high-expressing) was significantly associated with an abnormally low ANC (<1500) as well as frank neutropenia (ANC<1000) (p<0.05 for each comparison, Cox regression). Genotype ANC<1500 ANC<1000 AA 5/5 (100%)* 4/5 (80%)* GA 36/104 (35%) 22/104 (21%) GG 86/219 (39%) 57/219 (26%) Table 1. TNF-308A/A genotype is associated with neutropenia in MDS. *p<0.05 for each ANC level analyzed. As shown in Table 2, multivariate analysis of the TNFα -238G/A SNP revealed that the presence of a high-expressing genotype (AA + GA) was significantly associated with NCI Grade II or greater anemia (Hgb<10g/dl) (p<0.05, Cox regression). After controlling for the presence of red blood cell transfusions, the frequency of the A allele in patients with Hgb<10g/dl remained statistically significant (p<0.05). Furthermore, whereas the A allele was present in 14% of anemic individuals (Hgb<12.5g/dl, n=41), no patients with a normal Hgb (n=26) carried the A allele (p=0.03, Chi square). This also remained significant after controlling for red cell transfusions (p=0.02). Table 2. The presence of an A allele in the TNF-238G/A SNP is associated with NCI Grade II anemia in MDS. *p<0.05. Genotype Hgb<10g/dl GA + AA 26/41 (63%)* GG 136/287 (47%) In contrast, the frequencies of the IL-6 or MIF SNPs did not have a statistically significant effect on any of the measured outcomes. To evaluate the effect of TNFα on erythroid colony formation, human peripheral blood CD34+ cells from healthy adults were cultured in semi-solid media in the presence of IL-3 (10ng/ml), erythropoietin (1U/ml), SCF (50ng/ml) and increasing doses of TNFα (0–100ng/l) and erythroid burst-forming units (BFU-E) measured on days 7 and 14. In the presence of 25 and 100ng/ml TNFα, the percentage of BFU-E colonies was reduced by 50%. Furthermore, the erythroid colony suppressing affects of TNFα were reversed to baseline in a dose-dependent manner with the addition of the anti-TNF agent infliximab. These data indicate that the presence of high-expressing polymorphic alleles in the TNFα gene promoter is independently associated with both neutropenia and the severity of anemia in a large cohort of MDS patients. TNFα-overexpression may function as a cell non-autonomous factor that interacts synergistically with intrinsic defects within MDS progenitors to promote hypoplasia within the hematopoietic lineage, potentially increasing the severity of cytopenias in patients with MDS.


2012 ◽  
Vol 14 (4) ◽  
pp. 580-583 ◽  
Author(s):  
Toshinobu Miyamoto ◽  
Akira Tsujimura ◽  
Yasushi Miyagawa ◽  
Eitetsu Koh ◽  
Mikio Namiki ◽  
...  

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