scholarly journals Senescent vs. non-senescent cells in the human annulus in vivo: Cell harvest with laser capture microdissection and gene expression studies with microarray analysis

2010 ◽  
Vol 10 (1) ◽  
Author(s):  
Helen E Gruber ◽  
Gretchen L Hoelscher ◽  
Jane A Ingram ◽  
Natalia Zinchenko ◽  
Edward N Hanley
Oncogene ◽  
2001 ◽  
Vol 20 (43) ◽  
pp. 6196-6204 ◽  
Author(s):  
Ilias Alevizos ◽  
Mamatha Mahadevappa ◽  
Xue Zhang ◽  
Hiroe Ohyama ◽  
Yohko Kohno ◽  
...  

Toxins ◽  
2021 ◽  
Vol 13 (8) ◽  
pp. 550
Author(s):  
Carelle Kouasseu Jimdjio ◽  
Huali Xue ◽  
Yang Bi ◽  
Mina Nan ◽  
Lan Li ◽  
...  

Penicillium expansum is an important postharvest pathogen of pomaceous fruit and a causal agent of blue mold or soft rot. In this study, we investigated the effect of ambient pH on growth, ultrastructure alteration, and pathogenicity of P. expansum, as well as accumulation of patulin and expression of genes involved in patulin biosynthesis. Under different pH, the fungus was routinely cultured and collected for growth, pathogenicity, patulin production, and gene expression studies using transmission electron microscopy, apple inoculation, HPLC, and RT-qPCR methods. Different ambient pH had significant impact on expression of genes and growth factors involved in patulin biosynthesis. Under same range of pH, gene expression profile, growth factors, and patulin accumulation (in vivo and in vitro) all showed similar changing trends. A well-developed cell was observed in addition to upregulation of genes at pH between pH 5.0 and 7.0, while the opposite was observed when pH was too basic (8.5) or too acid (2.5). Additionally, ambient pH had direct or indirect influence on expression of PecreaA, PelaeA, and PepacC. These findings will help in understanding the effect of ambient pH on growth, pathogenicity, and patulin production and support the development of successful methods for combating P. expansum infection on apple fruits.


2008 ◽  
Vol 0 (ja) ◽  
pp. 081015093227032
Author(s):  
John William Fabre ◽  
Siamak Salehi ◽  
Lorna Eckley ◽  
Greta Jane Sawyer ◽  
Xiaohong Zhang ◽  
...  

2021 ◽  
Vol 20 (1) ◽  
Author(s):  
Martyna Gongerowska-Jac ◽  
Marcin Jan Szafran ◽  
Dagmara Jakimowicz

Abstract Background Identifying the regulatory factors that control transcriptional activity is a major challenge of gene expression studies. Here, we describe the application of a novel approach for in vivo identification of regulatory proteins that may directly or indirectly control the transcription of a promoter of interest in Streptomyces. Results A method based on the combination of Tn5 minitransposon-driven random mutagenesis and lux reporter genes was applied for the first time for the Streptomyces genus. As a proof of concept, we studied the topA supercoiling-sensitive promoter, whose activity is dependent on unknown regulatory factors. We found that the sco4804 gene product positively influences topA transcription in S. coelicolor, demonstrating SCO4804 as a novel player in the control of chromosome topology in these bacteria. Conclusions Our approach allows the identification of novel Streptomyces regulators that may be critical for the regulation of gene expression in these antibiotic-producing bacteria.


2011 ◽  
Vol 71 (3) ◽  
pp. 779-789 ◽  
Author(s):  
Diane Marotta ◽  
Jayashree Karar ◽  
W. Timothy Jenkins ◽  
Monika Kumanova ◽  
Kevin W. Jenkins ◽  
...  

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