scholarly journals Magnetic resonance imaging-based radiomics signature for preoperative prediction of Ki67 expression in bladder cancer

2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Zongtai Zheng ◽  
Zhuoran Gu ◽  
Feijia Xu ◽  
Niraj Maskey ◽  
Yanyan He ◽  
...  

Abstract Purpose The Ki67 expression is associated with the advanced clinicopathological features and poor prognosis in bladder cancer (BCa). We aimed to develop and validate magnetic resonance imaging (MRI)-based radiomics signatures to preoperatively predict the Ki67 expression status in BCa. Methods and materials We retrospectively collected 179 BCa patients with Ki67 expression and preoperative MRI. Radiomics features were extracted from T2-weighted (T2WI) and dynamic contrast-enhancement (DCE) images. The synthetic minority over-sampling technique (SMOTE) was used to balance the minority group (low Ki67 expression group) in the training set. Minimum redundancy maximum relevance was used to identify the best features associated with Ki67 expression. Support vector machine and Least Absolute Shrinkage and Selection Operator algorithms (LASSO) were used to construct radiomics signatures in training and SMOTE-training sets, and diagnostic performance was assessed by the area under the curve (AUC) and accuracy. The decision curve analyses (DCA) and calibration curve and were used to investigate the clinical usefulness and calibration of radiomics signatures, respectively. The Kaplan-Meier test was performed to investigate the prognostic value of radiomics-predicted Ki67 expression status. Results 1218 radiomics features were extracted from T2WI and DCE images, respectively. The SMOTE-LASSO model based on nine features achieved the best predictive performance in the SMOTE-training (AUC, 0.859; accuracy, 80.3%) and validation sets (AUC, 0.819; accuracy, 81.5%) with a good calibration performance and clinical usefulness. Immunohistochemistry-based high Ki67 expression and radiomics-predicted high Ki67 expression based on the SMOTE-LASSO model were significantly associated with poor disease-free survival in training and validation sets (all P < 0.05). Conclusions The SMOTE-LASSO model could predict the Ki67 expression status and was associated with survival outcomes of the BCa patients, thereby may aid in clinical decision-making.

2021 ◽  
Vol 13 ◽  
Author(s):  
Xiaowen Xu ◽  
Tao Wang ◽  
Weikai Li ◽  
Hai Li ◽  
Boyan Xu ◽  
...  

Subjective cognitive decline (SCD) is considered the earliest stage of the clinical manifestations of the continuous progression of Alzheimer’s Disease (AD). Previous studies have suggested that multimodal brain networks play an important role in the early diagnosis and mechanisms underlying SCD. However, most of the previous studies focused on a single modality, and lacked correlation analysis between different modal biomarkers and brain regions. In order to further explore the specific characteristic of the multimodal brain networks in the stage of SCD, 22 individuals with SCD and 20 matched healthy controls (HCs) were recruited in the present study. We constructed the individual morphological, structural and functional brain networks based on 3D-T1 structural magnetic resonance imaging (sMRI), diffusion tensor imaging (DTI) and resting-state functional magnetic resonance imaging (rs-fMRI), respectively. A t-test was used to select the connections with significant difference, and a multi-kernel support vector machine (MK-SVM) was applied to combine the selected multimodal connections to distinguish SCD from HCs. Moreover, we further identified the consensus connections of brain networks as the most discriminative features to explore the pathological mechanisms and potential biomarkers associated with SCD. Our results shown that the combination of three modal connections using MK-SVM achieved the best classification performance, with an accuracy of 92.68%, sensitivity of 95.00%, and specificity of 90.48%. Furthermore, the consensus connections and hub nodes based on the morphological, structural, and functional networks identified in our study exhibited abnormal cortical-subcortical connections in individuals with SCD. In addition, the functional networks presented more discriminative connections and hubs in the cortical-subcortical regions, and were found to perform better in distinguishing SCD from HCs. Therefore, our findings highlight the role of the cortical-subcortical circuit in individuals with SCD from the perspective of a multimodal brain network, providing potential biomarkers for the diagnosis and prediction of the preclinical stage of AD.


2021 ◽  
Author(s):  
Yu Wang ◽  
Hongfei Jia ◽  
Yifan Duan ◽  
Hongbing Xiao

Abstract Alzheimer's disease (AD) is a progressive neurodegenerative disease, which changes the structure of brain regions by some hidden causes. In this paper for assisting doctors to make correct judgments, an improved 3DPCANet method is proposed to classify AD by combining the mean (mALFF) of the whole brain. The main idea includes that firstly, the functional magnetic resonance imaging (fMRI) data is pre-processed, and mALFF is calculated to get the corresponding matrix. Then the features of mALFF images are extracted via the improved 3DPCANet network. Finally, AD patients with different stages are classified using support vector machine (SVM). Experiments results based on public data from the Alzheimer’s disease neuroimaging initiative (ADNI) show that the proposed approach has better performance compared with state-of-the-art methods. The accuracies of AD vs. significant memory concern (SMC), SMC vs. late mild cognitive impairment (LMCI), and normal control (NC) vs. SMC reach respectively 92.42%, 91.80%, and 89.50%, which testifies the feasibility and effectiveness of the proposed method.


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