Acoustic wave propagation in composite fluid‐saturated media

Geophysics ◽  
1989 ◽  
Vol 54 (12) ◽  
pp. 1554-1563 ◽  
Author(s):  
J. David Keller
Keyword(s):  
Wave Propagation ◽  
Shear Wave ◽  
Wave Attenuation ◽  
Composite Model ◽  
Coarse Grained ◽  
Stress Wave Propagation ◽  
Type I ◽  
Type Ii ◽  
Saturated Media ◽  
Sand Size

Biot’s linear model of stress‐wave propagation in a fluid‐saturated elastic framework is combined with a linear theoretical description of an inelastic frame to describe fluid‐saturated media in terms of a composite model. The composite model, the Constant Q (CQ) model, assumes an inelastic frame with frequency‐dependent complex elastic moduli and results in a frame response that is causal with Q exactly independent of frequency. The influence of frame inelasticity on the composite‐model Type I (compression), Type II, and shear‐wave attenuation response is found to be greatest for high and low frequencies, considering a frequency range of [Formula: see text]. The model is most sensitive to variations in permeability and pore‐size parameter for both attenuation and phase‐velocity responses. Parameter variations showed little effect on shear‐wave attenuation for a fine to course sand‐size frame matrix, indicating a fluid mechanism is responsible for the influence seen in Type I and Type II attenuations. The CQ model results fit the experimentally measured values of Type I attenuation and velocity for a fully saturated fine‐grained frame material (clay‐silt size grains) and a fully saturated coarse‐grained frame material (fine to coarse sand‐size grains). For Type I velocity, the experimentally observed dispersion clearly distinguishes the CQ model as superior to composite models that include a nondispersive frame, since such models predict very little dispersion due only to interpore fluid mechanisms.

Episodic tourmaline growth and re-equilibration in mica pegmatite from the Bihar Mica Belt, India: major- and trace-element variations under pegmatitic and hydrothermal conditions

2016 ◽  
Vol 154 (1) ◽  
pp. 68-86 ◽  
Author(s):  
PRANJIT HAZARIKA ◽  
DEWASHISH UPADHYAY ◽  
KAMAL LOCHAN PRUSETH
Keyword(s):  
Trace Elements ◽  
Trace Element ◽  
Major Element ◽  
Element Composition ◽  
Coarse Grained ◽  
Partial Replacement ◽  
Type I ◽  
Type Ii ◽  
Hydrothermal Conditions ◽  
Major Element Composition

AbstractMica pegmatites from the Bihar Mica Belt contain three distinct generations of tourmaline. The major-element composition, substitution vectors and trajectories within each group are different, which indicates that the three types of tourmalines are not a part of one evolutionary series. Rather, the differences in their chemistries as well their mutual microtextural relations, can be best explained by growth of tourmaline from pegmatitic melts followed by episodic re-equilibration during discrete geological events. The euhedral, coarse-grained brown type I tourmaline cores have relatively high Ca, Mg (XMgc. 0.37) and Al with correlated variation in Sr, Sc, Ti, Zr, Y, Cr, Pb and Rare Earth elements (REEs). They are inferred to have crystallized from pegmatitic melts. Monazites included within these tourmalines give chemical ages of 1290−1242 Ma interpreted to date the crystallization of the pegmatitic tourmaline. The bluish type II and greyish type III tourmalines with low Ca and Mg contents (XMg = 0.16−0.27) and high Zn, Sn, Nb, Ta and Na, formed by pseudomorphic partial replacement of the pegmatitic tourmaline via fluid-mediated coupled dissolution–reprecipitation, are ascribed to a hydrothermal origin. The ages obtained from monazites included in these tourmalines indicate two alteration events at c. 1100 Ma and c. 950 Ma. The correlated variation of Ca, Mg and Fe and the trace elements Sr, Sn, Sc, Zn and REE within the tourmalines indicates that the trace-element concentrations of tourmaline are controlled not only by the fluid chemistry but also by coupled substitutions with major-element ions.

scholarly journals Binding of Ca2+-Independent C2 Domains to Lipid Membranes: a Multi-Scale Molecular Dynamics Study

2020 ◽  
Author(s):  
Andreas Haahr Larsen ◽  
Mark S.P. Sansom
Keyword(s):  
Molecular Dynamics ◽  
Lipid Bilayers ◽  
Md Simulations ◽  
Multiscale Simulation ◽  
Coarse Grained ◽  
Type I ◽  
Type Ii ◽  
Binding Modes ◽  
C2 Domains ◽  
Anionic Lipids

AbstractC2 domains facilitate protein-lipid interaction in cellular recognition and signalling processes. They possess a β-sandwich structure, with either type I or type II topology. C2 domains can interact with anionic lipid bilayers in either a Ca2+-dependent or a Ca2+-independent manner. The mechanism of recognition of anionic lipids by Ca2+-independent C2 domains is incompletely understood. We have used molecular dynamics (MD) simulations to explore the membrane interactions of six Ca2+– independent C2 domains, from KIBRA, PI3KC2α, RIM2, PTEN, SHIP2, and Smurf2. In coarse grained MD simulations these C2 domains bound to lipid bilayers, forming transient interactions with zwitterionic (phosphatidylcholine, PC) bilayers compared to long lived interactions with anionic bilayers also containing either phosphatidylserine (PS) or PS and phosphatidylinositol bisphosphate (PIP2). Type I C2 domains bound non-canonically via the front, back or side of the β sandwich, whereas type II C2 domains bound canonically, via the top loops (as is typically the case for Ca2+-dependent C2 domains). C2 domains interacted strongly (up to 120 kJ/mol) with membranes containing PIP2 causing the bound anionic lipids to clustered around the protein. The C2 domains bound less strongly to anionic membranes without PIP2 (<50 kJ/mol), and most weakly to neutral membranes (<33 kJ/mol). Productive binding modes were identified and further analysed in atomistic simulations. For PTEN and SHIP2, CG simulations were also performed of the intact enzymes (i.e. phosphatase domain plus C2 domain) with PIP2-contating bilayers and the roles of the two domains in membrane localization were compared. From a methodological perspective, these studies establish a multiscale simulation protocol for studying membrane binding/recognition proteins, capable of revealing binding modes alongside details of lipid binding affinity and specificity.

Kyanite-bearing eclogite xenoliths from the Udachnaya kimberlite, Siberian craton, Russia

2017 ◽  
Vol 188 (1-2) ◽  
pp. 7 ◽  
Author(s):  
Ioana-Bogdana Radu ◽  
Bertrand Moine ◽  
Dmitri Ionov ◽  
Andrey Korsakov ◽  
Alexander Golovin ◽  
...  
Keyword(s):  
Siberian Craton ◽  
Major Element ◽  
Kimberlite Pipe ◽  
West African ◽  
Coarse Grained ◽  
Chemical Compositions ◽  
Type I ◽  
Type Ii ◽  
Major Element Composition ◽  
Subducted Oceanic Crust

Xenoliths brought up by kimberlite magmas are rare samples of otherwise inaccessible lithospheric mantle. Eclogite xenoliths are found in most cratons and commonly show a range of mineral and chemical compositions that can be used to better understand craton formation. This study focuses on five new kyanite-bearing eclogites from the Udachnaya kimberlite pipe (367±5 Ma). They are fine-to coarse-grained and consist mainly of “cloudy” clinopyroxene (cpx) and garnet (grt). The clinopyroxene is Al,Na-rich omphacite while the garnet is Ca-rich, by contrast to typical bi-mineral (cpx+grt) eclogites that contain Fe- and Mg-rich garnets. The Udachnaya kyanite eclogites are similar in modal and major element composition to those from other cratons (Dharwar, Kaapvaal, Slave, West African). The kyanite eclogites have lower REE concentrations than bi-mineral eclogites and typically contain omphacites with positive Eu and Sr anomalies, i.e. a “ghost plagioclase signature”. Because such a signature can only be preserved in nonmetasomatised samples, we infer that they were present in the protoliths of the eclogites. It follows that subducted oceanic crust is present at the base of the Siberian craton. Similar compositions and textures are also seen in kyanite eclogites from other cratons, which we view as evidence for an Archean, subduction-like formation mechanism related to craton accretion. Thus, contrary to previous work that classifies all kyanite eclogites as type I (IK), metasomatized by carbonatite/kimberlitic fluids, we argue that some of them, both from this work and those from other cratons, belong to the non-metasomatized type II (IIB). The pristine type IIB is the nearest in composition to protoliths of mantle eclogites because it contains no metasomatic enrichments.

scholarly journals Tourmaline as a Recorder of Ore-Forming Processes in the Xuebaoding W-Sn-Be Deposit, Sichuan Province, China: Evidence from the Chemical Composition of Tourmaline

Minerals ◽  
2020 ◽  
Vol 10 (5) ◽  
pp. 438
Author(s):  
Xinxiang Zhu ◽  
Markus B. Raschke ◽  
Yan Liu
Keyword(s):  
Chemical Composition ◽  
Aqueous Fluid ◽  
Sichuan Province ◽  
Coarse Grained ◽  
Gangue Mineral ◽  
Type I ◽  
Type Ii ◽  
Type Iii ◽  
Wide Range ◽  
Granite Type

The Xuebaoding W-Sn-Be deposit located in the Songpan-Ganze Orogenic Belt (Sichuan Province, China) is a hydrothermal deposit with less developed pegmatite stage. The deposit is famous for the coarse-grained crystals of beryl, scheelite, cassiterite, apatite, fluorite, muscovite, and others. The orebody is spatially associated with the Pankou and Pukouling granites hosted in Triassic marbles and schists. The highly fractionated granites are peraluminous, Li-Rb-Cs-rich, and related to W-Sn-Be mineralization. The mineralization can chiefly be classified based on the wallrock and mineral assemblages as muscovite and beryl in granite (Zone I), then beryl, cassiterite and muscovite at the transition from granite to triassic strata (Zone II), and the main mineralized veins composed of an assemblage of beryl, cassiterite, scheelite, fluorite, and apatite hosted in metasedimentary rock units of marble and schist (Zone III). Due to the stability of tourmaline over a wide range of temperature and pressure conditions, its compositional variability can reflect the evolution of the ore-forming fluids. Tourmaline is an important gangue mineral in the Xuebaoding deposit and occurs in the late-magmatic to early-hydrothermal stage, and can thus be used as a proxy for the fluid evolution. Three types of tourmalines can be distinguished: tourmaline disseminations within the granite (type I), tourmaline clusters at the margin of the granite (type II), and tourmalines occurring in the mineralized veins (type III). Based on their chemical composition, both type I and II tourmalines belong to the alkali group and to the dravite-schorl solid solution. Type III tourmaline which is higher in X-site vacancy corresponds to foitite and schorl. It is proposed that the weakly zoned type I tourmalines result from an immiscible boron-rich aqueous fluid in the latest stage of granite crystallization, that the type II tourmalines showing skeletal texture directly formed from the undercooled melts, and that type III tourmalines occurring in the mineralized veins formed directly from the magmatic hydrothermal fluids. Both type I and type II tourmalines show similar compositional variations reflecting the highly fractionated Pankou and Pukouling granites. The higher Ca, Mg, and Fe contents of type III tourmaline are buffered by the composition of the metasedimentary host rocks. The decreasing Na content (<0.8 atoms per formula unit (apfu)) and increasing Fe3+/Fe2+ ratios of all tourmaline samples suggest that they precipitated from oxidized, low-salinity fluids. The decreasing trend of Al content from type I (5.60–6.36 apfu) and type II (6.01–6.43 apfu) to type III (5.58–5.87 apfu) tourmalines, and associated decrease in Na, may be caused by the crystallization of albite and muscovite. The combined petrographic, mineralogical, and chemical characteristics of the three types of tourmalines thus reflect the late-magmatic to early-hydrothermal evolution of the ore-forming fluids, and could be used as a geochemical fingerprint for prospecting W-Sn-Be mineralization in the Xuebaoding district.

scholarly journals Optogenetic Stimulation Shifts the Excitability of Cerebral Cortex from Type I to Type II: Oscillation Onset and Wave Propagation

2017 ◽  
Vol 13 (1) ◽  
pp. e1005349 ◽  
Author(s):  
Stewart Heitmann ◽  
Michael Rule ◽  
Wilson Truccolo ◽  
Bard Ermentrout
Keyword(s):  
Wave Propagation ◽  
Cerebral Cortex ◽  
Type I ◽  
Type Ii ◽  
Optogenetic Stimulation

Heat-Etching with a Bullivant Type II Simple Freeze-Cleave Device

1970 ◽  
Vol 28 ◽  
pp. 106-107 ◽  
Author(s):  
Ronald S. Weinstein ◽  
N. Scott McNutt
Keyword(s):  
New Zealand ◽  
General Hospital ◽  
Massachusetts General Hospital ◽  
Type I ◽  
Type Ii ◽  
Collaborative Effort ◽  
Temperature And Pressure ◽  
The University

The Type I simple cold block device was described by Bullivant and Ames in 1966 and represented the product of the first successful effort to simplify the equipment required to do sophisticated freeze-cleave techniques. Bullivant, Weinstein and Someda described the Type II device which is a modification of the Type I device and was developed as a collaborative effort at the Massachusetts General Hospital and the University of Auckland, New Zealand. The modifications reduced specimen contamination and provided controlled specimen warming for heat-etching of fracture faces. We have now tested the Mass. General Hospital version of the Type II device (called the “Type II-MGH device”) on a wide variety of biological specimens and have established temperature and pressure curves for routine heat-etching with the device.

Labelling of non-A, non-B hepatitis infected chimpanzee hepatocytes with nuclease-gold conjugates

1984 ◽  
Vol 42 ◽  
pp. 250-251
Author(s):  
G. D. Gagne ◽  
M. F. Miller ◽  
D. A. Peterson
Keyword(s):  
Endoplasmic Reticulum ◽  
Experimental Infection ◽  
Uranyl Acetate ◽  
Type I ◽  
Cellular Injury ◽  
Type Ii ◽  
Tubular Structures ◽  
Type Iii ◽  
Type Iv ◽  
Infected Chimpanzee

Experimental infection of chimpanzees with non-A, non-B hepatitis (NANB) or with delta agent hepatitis results in the appearance of characteristic cytoplasmic alterations in the hepatocytes. These alterations include spongelike inclusions (Type I), attached convoluted membranes (Type II), tubular structures (Type III), and microtubular aggregates (Type IV) (Fig. 1). Type I, II and III structures are, by association, believed to be derived from endoplasmic reticulum and may be morphogenetically related. Type IV structures are generally observed free in the cytoplasm but sometimes in the vicinity of type III structures. It is not known whether these structures are somehow involved in the replication and/or assembly of the putative NANB virus or whether they are simply nonspecific responses to cellular injury. When treated with uranyl acetate, type I, II and III structures stain intensely as if they might contain nucleic acids. If these structures do correspond to intermediates in the replication of a virus, one might expect them to contain DNA or RNA and the present study was undertaken to explore this possibility.

Comparative surface and ultrastructural views of methylotrophic bacteria by TEM, STEM, SE, and freeze-etch electron microscopy.

1987 ◽  
Vol 45 ◽  
pp. 792-793
Author(s):  
T.A. Fassel ◽  
M.J. Schaller ◽  
M.E. Lidstrom ◽  
C.C. Remsen
Keyword(s):  
Cytoplasmic Membrane ◽  
Structural Features ◽  
Methylotrophic Bacteria ◽  
Type I ◽  
Type Ii ◽  
Membrane Complex ◽  
Oxidation Of Methane ◽  
Methane Oxidizing Bacteria ◽  
Wall Structures ◽  
Methylomonas Albus

Methylotrophic bacteria play an Important role in the environment in the oxidation of methane and methanol. Extensive intracytoplasmic membranes (ICM) have been associated with the oxidation processes in methylotrophs and chemolithotrophic bacteria. Classification on the basis of ICM arrangement distinguishes 2 types of methylotrophs. Bundles or vesicular stacks of ICM located away from the cytoplasmic membrane and extending into the cytoplasm are present in Type I methylotrophs. In Type II methylotrophs, the ICM form pairs of peripheral membranes located parallel to the cytoplasmic membrane. Complex cell wall structures of tightly packed cup-shaped subunits have been described in strains of marine and freshwater phototrophic sulfur bacteria and several strains of methane oxidizing bacteria. We examined the ultrastructure of the methylotrophs with particular view of the ICM and surface structural features, between representatives of the Type I Methylomonas albus (BG8), and Type II Methylosinus trichosporium (OB-36).

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