Prognostic Value of Minimal Residual Disease Quantification by Real-Time Reverse Transcriptase Polymerase Chain Reaction in Patients With Core Binding Factor Leukemias

2003 ◽  
Vol 21 (23) ◽  
pp. 4413-4422 ◽  
Author(s):  
Jürgen Krauter ◽  
Kerstin Görlich ◽  
Oliver Ottmann ◽  
Michael Lübbert ◽  
Hartmut Döhner ◽  
...  

Purpose: In patients with acute myeloblastic leukemia with t(8;21) or inv(16) aberrations (core binding factor [CBF] leukemias), minimal residual disease (MRD) can be sensitively detected during and after chemotherapy by use of molecular methods. However, the prognostic impact of qualitative MRD detection is still under debate. In this study, the prognostic value of MRD quantification in patients with CBF leukemias was assessed. Patients and Methods: We quantified MRD at various time points during and after therapy by real-time reverse transcriptase polymerase chain reaction (RT-PCR) for AML1/MTG8 and CBFB/MYH11 in 37 patients with CBF leukemias treated within a multicenter trial. Results: At initial diagnosis, the patients showed a heterogenous fusion gene expression relative to glyceraldehyde 3-phosphate dehydrogenase with a variation of more than two log steps. According to MRD status during/after therapy, two groups of patients were separated. Of the 26 patients who had MRD levels of less than 1% in relation to initial diagnosis at all time points tested after induction chemotherapy, only two experienced relapse after a median follow-up of 19 months. Of the 11 patients who had a sample with an MRD level ≥ 1% at least at one time point after induction therapy, 10 experienced relapse, with a median remission duration of 10 months (P < .001). The median interval between the informative MRD sample and clinical relapse in these patients was 3 months. Conclusion: MRD quantification by real-time RT-PCR allows the identification of patients with a high risk of relapse among the CBF leukemias.

Blood ◽  
2014 ◽  
Vol 124 (21) ◽  
pp. 5354-5354
Author(s):  
Ana Paula Alencar de Lima Lange ◽  
Ana Sílvia Gouvea Lima ◽  
Rafael Jacomo ◽  
Raul A Melo ◽  
Rosane Bittencourt ◽  
...  

Abstract Minimal Residual Disease (MRD) monitoring is recognized as a clinically useful tool for the management of Acute Promyelocytic Leukemia (APL) and has been performed by reverse transcriptase Polymerase Chain Reaction (RT-PCR) and Real-Time Quantitative Polymerase Chain Reaction (RQ-PCR). The vast majority of the published studies were conducted in developed countries within well established clinical trials, but the feasibility of MRD monitoring in developing countries is controversial. Here we describe the experience of Brazilian centers that participated in the International Consortium on Acute Promyelocytic Leukemia (IC-APL). In the present study, the participating centers were located at distances up to 2.500 km of central national laboratory and delivery sample time is less than two days. The aim of this study was to determine the feasibility and compare the effectiveness of RQ-PCR and RT-PCR in the MRD research in the context of IC-APL. We analyzed 398 bone marrow (BM) samples from 74 Brazilians patients with de novo APL; mean follow-up of 18 months. Samples were collected at diagnosis (n=74), at post-induction (n=48) after the third consolidation (n=41), and at maintenance (n=235). Standardized assays developed by Europe Against Cancer (EAC) program were used. Clinical characteristics were similar among the full cohort (patients from Brazil [n=122], Mexico [n=30], Chile [n=23], Uruguay [n=8]). Thirty-nine (52%) patients were classified as intermediate risk. PML breakpoint was bcr1 (n=45), bcr2 (n=1), and bcr3 (n=27). The median NCN of transcripts at diagnosis was 0.5151 (n=41) and 0.4690 (n=27) for the bcr1 and bcr3 subtypes, respectively. At the end of induction, there was a reduction of about 3 logs (0.0004 for bcr1 and 0.0005 for bcr3). In this stage, six discrepant cases were observed, all positive by RQ-PCR. There were no relapsed cases. 66/74 (89%) patients completed induction phase and achieved complete remission, and 8/74 (10%) died of hemorrhagic causes. The rate of molecular remission in our study was 37.5% (18/48) by RQ-PCR and 50% (24/48) by RT-PCR. Considering samples obtained at the end of consolidation phase, one discrepant result was detected as negative by RT; however it was not confirmed by RQ-PCR. Both cases did not relapse. The analysis for RQ-PCR was performed in 64% (41/64) of samples. Two patients have died of infectious diseases during the consolidation phase. All patients achieved molecular remission based on the results of RT-PCR. One patient was positive by RQ-PCR (NCN: 0.00006), but all subsequent samples were negative for both techniques, and the patient is alive, in remission. The median NCN of all samples after the third consolidation phase was 0.00001 PML-RARA/104 copies of ABL copies, regardless of the breakpoint. Within 53 patients who have completed the third cycle of consolidation, only 48 started the maintenance. 235 samples were evaluated during maintenance; 87.6% (206/235) were negative by RQ-PCR technique and 94.4% (222/235) by RT-PCR. The median NCN of all samples in the maintenance was 0.00001 PML-RARA/104 copies of ABL copies. The RQ-PCR technique proved to be predictive of relapse in three out of four cases of molecular relapse. All three cases showed positive results for RT-PCR during the early stages of the maintenance cycle and were confirmed by a second sample taken within 15 days. These results are confirmed in literature, observing that most patients who had negative PCR after consolidation relapsed after few months. In one case of molecular relapse, the RQ-PCR analysis provided much earlier warning of recurring disease, testing positive 5 and 6 months, respectively, before documentation of molecular relapse by conventional RT-PCR assay. In two cases, the negative result was performed by RT-PCR post induction, and was not confirmed by RQ-PCR, which remained positive on subsequent samples, and was confirmed once by RT-PCR after long time. According to transcripts numbers at maintenance, there was a decrease of approximately 5 logs when compared to samples after third consolidation. RQ-PCR technique was more sensitive than RT-PCR, providing earlier warning of relapse, thereby allowing greater opportunity for successful delivery of pre-emptive therapy. In sum, the implementation of the IC-APL allowed the improvement of laboratory standards in parallel to advances in clinical management. Disclosures No relevant conflicts of interest to declare.


1998 ◽  
Vol 16 (4) ◽  
pp. 1519-1525 ◽  
Author(s):  
K Laczika ◽  
M Novak ◽  
B Hilgarth ◽  
M Mitterbauer ◽  
G Mitterbauer ◽  
...  

PURPOSE (1) Quantification of minimal residual disease (MRD) by competitive CBFbeta/MYH11 reverse-transcriptase polymerase chain reaction (RT-PCR) in patients with acute myeloid leukemia (AML) and inversion(16) [inv(16)] during postremission therapy, (2) comparison of this method with conventional two-step RT-PCR, and (3) evaluation of a potential prognostic value. PATIENTS AND METHODS MRD of six consecutive adult patients with AML and inv(16)(p13;q22) or t(16;16)(p13;q22) who entered complete remission (CR) was monitored by competitive CBFbeta/MYH11 RT-PCR in their bone marrow (BM) during postremission therapy with high-dose cytarabine (HiDAC) or after BM transplantation with a matched unrelated-donor marrow (MUD-BMT) during an observation period of 4.5 to 27 months after initiation of treatment. RESULTS Competitive PCR showed a gradual decline by at least 4 orders of magnitude after 7 to 9 months in patients in continuous CR (CCR), while one patient who relapsed after 13.5 months only achieved a reduction by 2 orders of magnitude at the end of consolidation therapy. A rapid decrease below the detection limit was observed within 1 month in two patients after MUD-BMT. A temporary reappearance of molecular MRD was observed in these patients during immunosuppression for graft-versus-host disease (GvHD). After reduction of immunosuppression, the level of MRD dropped again below the PCR detection limit. Molecular monitoring by conventional two-step RT-PCR yielded comparable results only when multiple assays per time point were performed, while single-assay RT-PCR gave misleading results. CONCLUSION Competitive RT-PCR is a valuable tool for molecular monitoring during postremission chemotherapy, as well as after BMT.


Blood ◽  
1992 ◽  
Vol 79 (3) ◽  
pp. 554-558 ◽  
Author(s):  
KS Chang ◽  
JF Lu ◽  
G Wang ◽  
JM Trujillo ◽  
E Estey ◽  
...  

The retinoic acid receptor alpha (RAR alpha) and the myl gene are involved in the translocation breakpoint t(15;17)(q22;q21) in acute promyelocytic leukemia (APL). The majority of the breakpoint sites have been mapped within the second intron of the RAR alpha gene; however, the breakpoint sites on the myl gene are variable. Using primer sets derived from exon 2 or exon 3 of the RAR alpha gene and a primer derived from the myl cDNA, we were able to amplify the breakpoint sites of the fusion transcripts of all six APL RNA samples by the reverse transcriptase-polymerase chain reaction (RT-PCR). A DNA fragment of 290 bp (breakpoint A) was amplified using RNA samples from three patients, whereas two DNA fragments of 630 and 774 bp (breakpoint B) were amplified using RNA samples from the other three APL patients. DNA sequence analysis of the amplified fragments suggests that the APL breakpoints clustered within two different introns of the myl gene. Northern blot analysis demonstrated that fusion transcripts RAR alpha/myl and myl/RAR alpha of varying sizes were detected in patients with different breakpoint sites on the myl gene. In addition, we analyzed five APL samples in complete remission and detected t(15;17)- positive cells. We conclude that the t(15;17) breakpoints in APL can be amplified by PCR using a single primer set and that minimal residual disease can be demonstrated in APL using RT-PCR.


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