scholarly journals Structure of the Arabidopsis thaliana DCL4 DUF283 domain reveals a noncanonical double-stranded RNA-binding fold for protein-protein interaction

RNA ◽  
2010 ◽  
Vol 16 (3) ◽  
pp. 474-481 ◽  
Author(s):  
H. Qin ◽  
F. Chen ◽  
X. Huan ◽  
S. Machida ◽  
J. Song ◽  
...  
2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Ching-Yu Shen ◽  
You-Yi Chen ◽  
Ke-Wei Liu ◽  
Hsiang-Chia Lu ◽  
Song-Bin Chang ◽  
...  

AbstractThe ovules and egg cells are well developed to be fertilized at anthesis in many flowering plants. However, ovule development is triggered by pollination in most orchids. In this study, we characterized the function of a Bsister gene, named PeMADS28, isolated from Phalaenopsis equestris, the genome-sequenced orchid. Spatial and temporal expression analysis showed PeMADS28 predominantly expressed in ovules between 32 and 48 days after pollination, which synchronizes with integument development. Subcellular localization and protein–protein interaction analyses revealed that PeMADS28 could form a homodimer as well as heterodimers with D-class and E-class MADS-box proteins. In addition, ectopic expression of PeMADS28 in Arabidopsis thaliana induced small curled rosette leaves, short silique length and few seeds, similar to that with overexpression of other species’ Bsister genes in Arabidopsis. Furthermore, complementation test revealed that PeMADS28 could rescue the phenotype of the ABS/TT16 mutant. Together, these results indicate the conserved function of BsisterPeMADS28 associated with ovule integument development in orchid.


2021 ◽  
Author(s):  
Kaho Suzuki ◽  
Yousuke Takaoka ◽  
Minoru Ueda

A rationally designed stapled JAZ peptide selectively inhibited MYCs, master-regulators of the jasmonate signaling in Arabidopsis thaliana. It is proposed as a novel chemical tool for the analysis of MYC related jasmonate signaling.


2016 ◽  
Vol 92 (1-2) ◽  
pp. 105-116 ◽  
Author(s):  
Hong Li ◽  
Shiping Yang ◽  
Chuan Wang ◽  
Yuan Zhou ◽  
Ziding Zhang

2016 ◽  
Vol 130 (1) ◽  
pp. 45-55 ◽  
Author(s):  
Hikaru Sawano ◽  
Takuma Matsuzaki ◽  
Tomoyuki Usui ◽  
Midori Tabara ◽  
Akihito Fukudome ◽  
...  

Plants ◽  
2019 ◽  
Vol 8 (5) ◽  
pp. 124 ◽  
Author(s):  
Joseph L. Pegler ◽  
Jackson M. J. Oultram ◽  
Christopher P. L. Grof ◽  
Andrew L. Eamens

Adequate phosphorous (P) is essential to plant cells to ensure normal plant growth and development. Therefore, plants employ elegant mechanisms to regulate P abundance across their developmentally distinct tissues. One such mechanism is PHOSPHATE2 (PHO2)-directed ubiquitin-mediated degradation of a cohort of phosphate (PO4) transporters. PHO2 is itself under tight regulation by the PO4 responsive microRNA (miRNA), miR399. The DOUBLE-STRANDED RNA BINDING (DRB) proteins, DRB1, DRB2 and DRB4, have each been assigned a specific functional role in the Arabidopsis thaliana (Arabidopsis) miRNA pathway. Here, we assessed the requirement of DRB1, DRB2 and DRB4 to regulate the miR399/PHO2 expression module under PO4 starvations conditions. Via the phenotypic and molecular assessment of the knockout mutant plant lines, drb1, drb2 and drb4, we show here that; (1) DRB1 and DRB2 are required to maintain P homeostasis in Arabidopsis shoot and root tissues; (2) DRB1 is the primary DRB required for miR399 production; (3) DRB2 and DRB4 play secondary roles in regulating miR399 production, and; (4) miR399 appears to direct expression regulation of the PHO2 transcript via both an mRNA cleavage and translational repression mode of RNA silencing. Together, the hierarchical contribution of DRB1, DRB2 and DRB4 demonstrated here to be required for the appropriate regulation of the miR399/PHO2 expression module identifies the extreme importance of P homeostasis maintenance in Arabidopsis to ensure that numerous vital cellular processes are maintained across Arabidopsis tissues under a changing cellular environment.


2015 ◽  
Vol 32 (5) ◽  
pp. 1329-1341 ◽  
Author(s):  
Mark A. Beilstein ◽  
Kyle B. Renfrew ◽  
Xiangyu Song ◽  
Eugene V. Shakirov ◽  
Michael J. Zanis ◽  
...  

2000 ◽  
Vol 276 (10) ◽  
pp. 7681-7688 ◽  
Author(s):  
Lili Wan ◽  
Jeong-Kook Kim ◽  
Victoria W. Pollard ◽  
Gideon Dreyfuss

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