scholarly journals Isotopic Fractionation of Sulfur in Carbonyl Sulfide by Carbonyl Sulfide Hydrolase of Thiobacillus thioparus THI115

2017 ◽  
Vol 32 (4) ◽  
pp. 367-375 ◽  
Author(s):  
Takahiro Ogawa ◽  
Shohei Hattori ◽  
Kazuki Kamezaki ◽  
Hiromi Kato ◽  
Naohiro Yoshida ◽  
...  
2011 ◽  
Vol 11 (19) ◽  
pp. 10293-10303 ◽  
Author(s):  
S. Hattori ◽  
S. O. Danielache ◽  
M. S. Johnson ◽  
J. A. Schmidt ◽  
H. G. Kjaergaard ◽  
...  

Abstract. We report measurements of the ultraviolet absorption cross sections of OC32S, OC33S, OC34S and O13CS from 195 to 260 nm. The OCS isotopologues were synthesized from isotopically-enriched elemental sulfur by reaction with carbon monoxide. The measured cross section of OC32S is consistent with literature spectra recorded using natural abundance samples. Relative to the spectrum of the most abundant isotopologue, substitution of heavier rare isotopes has two effects. First, as predicted by the reflection principle, the Gaussian-based absorption envelope becomes slightly narrower and blue-shifted. Second, as predicted by Franck-Condon considerations, the weak vibrational structure is red-shifted. Sulfur isotopic fractionation constants (33ε, 34ε) as a function of wavelength are not highly structured, and tend to be close to zero on average on the high energy side and negative on the low energy side. The integrated photolysis rate of each isotopologue at 20 km, the approximate altitude at which most OCS photolysis occurs, was calculated. Sulfur isotopic fractionation constants at 20 km altitude are (−3.7 ± 4.5)‰ and (1.1 ± 4.2)‰ for 33ε and 34ε, respectively, which is inconsistent with the previously estimated large fractionation of over 73‰ in 34ε. This demonstrates that OCS photolysis does not produce sulfur isotopic fractionation of more than ca. 5‰, suggesting OCS may indeed be a significant source of background stratospheric sulfate aerosols. Finally, the predicted isotopic fractionation constant for 33S excess (33E) in OCS photolysis is (−4.2 ± 6.6)‰, and thus photolysis of OCS is not expected to be the source of the non-mass-dependent signature observed in modern and Archaean samples.


2016 ◽  
Vol 50 (7) ◽  
pp. 3537-3544 ◽  
Author(s):  
Kazuki Kamezaki ◽  
Shohei Hattori ◽  
Takahiro Ogawa ◽  
Sakae Toyoda ◽  
Hiromi Kato ◽  
...  

2012 ◽  
Vol 12 (9) ◽  
pp. 25329-25353 ◽  
Author(s):  
J. A. Schmidt ◽  
S. Hattori ◽  
N. Yoshida ◽  
S. Nanbu ◽  
M. S. Johnson ◽  
...  

Abstract. The isotopic fractionation in OCS photolysis is studied theoretically from first principles. UV absorption cross sections for OCS, OC33S, OC34S, OC36S and O13CS are calculated using the time-depedent quantum mechanical formalism and recent potential energy surfaces for the lowest four singlet and lowest four triplet electronic states. The calculated isotopic fractionations as a function of wavelength are in good agreement with recent measurements by Hattori et al. (2011) and indicate that photolysis leads to only a small enrichment of 34S in the remaining pool of OCS. A simple stratospheric model is constructed taking into account the main stratospheric sink reactions of OCS and it is found that stratospheric removal overall slightly favors light OCS in constrast to the findings of Leung et al. (2002). These results show, based on isotopic considerations, that OCS is an acceptable source of background stratosperic sulfate aerosol in agreement with a recent model study of Brühl et al. (2012). The 13C isotopic fractionation due to photolysis of OCS is significant and will leave a strong signal in the pool of remaining OCS making it a candidate for tracing using the ACE-FTS and MIPAS data sets.


2011 ◽  
Vol 11 (7) ◽  
pp. 20487-20520 ◽  
Author(s):  
S. Hattori ◽  
S. O. Danielache ◽  
M. S. Johnson ◽  
J. A. Schmidt ◽  
H. G. Kjaergaard ◽  
...  

Abstract. We report measurements of the ultraviolet absorption cross sections of OC32S, OC33S, OC34S and O13CS from 195 to 260 nm. The OCS isotopologues were synthesized from isotopically-enriched elemental sulfur by reaction with carbon monoxide. The measured cross section of OC32S is consistent with literature spectra recorded using natural abundance samples. Relative to the spectrum of the most abundant isotopologue, substitution of heavier rare isotopes has two effects. First, as predicted by the reflection principle, the Gaussian-based absorption envelope becomes slightly more narrow and blue-shifted. Second, as predicted by Franck-Condon considerations, the weak vibrational structure is red-shifted. Sulfur isotopic fractionation constants (33ε, 34ε) as a function of wavelength are not highly structured, and tend to be close to zero on average on the high energy side and negative on the low energy side. Since OCS photolysis occurs in the lower stratosphere, the integrated photolysis rate of each isotopologue at 20 km was calculated. Sulfur isotopic fractionation constants at 20 km altitude are (−3.7 ± 4.5) ‰ and (1.1 ± 4.2) ‰ for 33ε and 34ε, respectively, which is inconsistent with the previously estimated large fractionation of over 73 ‰ in 34ε. This demonstrates that OCS photolysis does not produce sulfur isotopic fractionation of more than ca. 5 ‰, suggesting OCS may be the source of background stratospheric sulfate aerosols. Finally, the predicted isotopic fractionation constant for 33S excess (33E) in OCS photolysis is (−4.2 ± 6.6) ‰, and thus photolysis of OCS is not expected to be the source of the non-mass-dependent signature observed in modern and Archaean samples.


1998 ◽  
Vol 180 (10) ◽  
pp. 2583-2589 ◽  
Author(s):  
Yoko Katayama ◽  
Yasuhiko Matsushita ◽  
Miyuki Kaneko ◽  
Mai Kondo ◽  
Tadayoshi Mizuno ◽  
...  

ABSTRACT Thiocyanate hydrolase is a newly found enzyme fromThiobacillus thioparus THI 115 that converts thiocyanate to carbonyl sulfide and ammonia (Y. Katayama, Y. Narahara, Y. Inoue, F. Amano, T. Kanagawa, and H. Kuraishi, J. Biol. Chem. 267:9170–9175, 1992). We have cloned and sequenced the scngenes that encode the three subunits of the enzyme. ThescnB, scnA, and scnC genes, arrayed in this order, contained open reading frames encoding sequences of 157, 126, and 243 amino acid residues, respectively, for the β, α, and γ subunits, respectively. Each open reading frame was preceded by a typical Shine-Dalgarno sequence. The deduced amino-terminal peptide sequences for the three subunits were in fair agreement with the chemically determined sequences. The protein molecular mass calculated for each subunit was compatible with that determined by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. From a computer analysis, thiocyanate hydrolase showed significant homologies to bacterial nitrile hydratases known to convert nitrile to the corresponding amide, which is further hydrolyzed by amidase to form acid and ammonia. The two enzymes were homologous over regions corresponding to almost the entire coding regions of the genes: the β and α subunits of thiocyanate hydrolase were homologous to the amino- and carboxyl-terminal halves of the β subunit of nitrile hydratase, and the γ subunit of thiocyanate hydrolase was homologous to the α subunit of nitrile hydratase. Comparisons of the catalytic properties of the two homologous enzymes support the model for the reaction steps of thiocyanate hydrolase that was previously presented on the basis of biochemical analyses.


2002 ◽  
Vol 29 (10) ◽  
pp. 112-1-112-4 ◽  
Author(s):  
Fok-Yan T. Leung ◽  
Agustín J. Colussi ◽  
Michael R. Hoffmann ◽  
Geoffrey C. Toon

1992 ◽  
Vol 267 (13) ◽  
pp. 9170-9175
Author(s):  
Y Katayama ◽  
Y Narahara ◽  
Y Inoue ◽  
F Amano ◽  
T Kanagawa ◽  
...  

2018 ◽  
Author(s):  
Kazuki Kamezaki ◽  
Shohei Hattori ◽  
Enno Bahlmann ◽  
Naohiro Yoshida

Abstract. Knowledge related to sulfur isotopic composition of carbonyl sulphide (OCS or COS), the most abundant atmospheric sulfur species, remains scarce. Earlier method developed for sulfur isotopic analysis for OCS using S+ fragmentation is inapplicable for ambient air samples because of the large samples required (approx. 500 L of 500 pmol mol−1 OCS). To overcome this difficulty, herein we present a new sampling system for collecting approx. 10 nmol of OCS from ambient air coupled with a purification system. Salient system features are (i) accommodation of samples up to 500 L (= approx. 10 nmol) of air at 5 L min−1, (ii) portability of 7 inch tubes (approx. 1 cm3) for preserving samples, and (iii) purification OCS from other compounds such as CO2. We tested the OCS collection efficiency of the systems and sulfur isotopic fractionation during sampling. Results show precision (1σ) of δ33S(OCS), δ34S(OCS), and Δ33S(OCS) values, respectively, as 0.4 ‰, 0.2 ‰, and 0.4 ‰. Additionally, this report presents diurnal variation of δ34S(OCS) values collected from ambient air at Suzukakedai campus of Tokyo Institute of Technology located in Yokohama, Japan. The observed OCS concentrations and δ34S(OCS) values were, respectively, 447–520 pmol mol−1 and from 10.4 ‰ to 10.7 ‰. No significant difference was found between values obtained during the day and night. The observed δ34S(OCS) values in ambient air differed greatly from previously reported values ((4.9 ± 0.3) ‰) for compressed air collected at Kawasaki, Japan, presumably because of sampling conditions and collection processes for that sample. Consequently, previous values of δ34S(OCS) = (4.9 ± 0.3) ‰ were not representative samples for a global signal. When considering (10.5 ± 0.4) ‰ is postulated as the global signal of δ34S(OCS), this revised δ34S(OCS) value is consistent with previous estimation based on terrestrial and oceanic sulfur sources. The δ34S(OCS) value explains the reported δ34S(OCS) values for background stratospheric sulfate. The system presented herein is useful for application of δ34S(OCS) for investigation of OCS sources and sinks in the troposphere to elucidate its cycle and its contribution to background stratospheric sulfate.


Sign in / Sign up

Export Citation Format

Share Document