Modeling prebiotic catalysis with nucleic acid-like polymers and its implications for the proposed RNA world

2004 ◽  
Vol 76 (12) ◽  
pp. 2085-2099 ◽  
Author(s):  
S. G. Srivatsan

The theory that RNA molecules played a pivotal role in the early evolution of life is now widely accepted. Studies related to this hypothetical “RNA world” include three major areas: the formation of precursors for the first RNA molecules, the polymerization process, and the potential of RNA to catalyze chemical and biochemical reactions. Several chemical and biochemical studies performed under simulated prebiotic conditions support the role of RNA as both genetic as well as catalytic material. However, owing to the lack of credible mechanism for de novo nucleic acid synthesis and the hydrolytic instability of RNA molecules, there has been some serious discussion of whether biopolymers that closely resembled nucleic acid preceded the “RNA world”. In this context, an overview of prebiotic chemistry, the role of mineral surface, and the significance of studies related to RNA-like polymers in the origin of life are presented here.

1959 ◽  
Vol 234 (3) ◽  
pp. 625-627
Author(s):  
Ranjan Mehta ◽  
David A. Vaughan ◽  
Shreepad R. Wagle ◽  
Kendall D. Barbee ◽  
S.P. Mistry ◽  
...  

Author(s):  
Lenny Moss

The appearance of maggots on meat or of intestinal tapeworms supported an ancient belief in the spontaneous generation of life. This idea was challenged in the seventeenth century but not abandoned before Pasteur’s experiments. Scientists now agree that terrestrial life had a single origin, but differ in explanations. Some believe that life began with the onset of protein-based metabolism, supported by evidence of spontaneous abiotic amino acid synthesis and theoretical models of self-sustaining and evolving systems of enzymes. Others believe life began with the appearance of nucleic acid-based molecular replicators and have organized their research efforts around the vision of a primordial ‘RNA world’.


Living cells grown in tissue culture have been irradiated with a narrow beam of soft X-rays of effective diameter 2·5 μ. The method has been used in conjunction with quantitative ultra-violet photomicrography to investigate the role of the nucleolus in nucleic acid synthesis. The results show that X-irradiation of the nucleolus reduces the amount of nucleic acid synthesized in the nucleus when measured 3 to 7 h after irradiation, whereas X-irradiation of the nuclear sap with an equal dose does not show this effect. The significance of this is discussed.


F1000Research ◽  
2016 ◽  
Vol 5 ◽  
pp. 1511 ◽  
Author(s):  
Sabine Müller ◽  
Bettina Appel ◽  
Darko Balke ◽  
Robert Hieronymus ◽  
Claudia Nübel

Since the discovery of the first catalytic RNA in 1981, the field of ribozyme research has developed from the discovery of catalytic RNA motifs in nature and the elucidation of their structures and catalytic mechanisms, into a field of engineering and design towards application in diagnostics, molecular biology and medicine. Owing to the development of powerful protocols for selection of nucleic acid catalysts with a desired functionality from random libraries, the spectrum of nucleic acid supported reactions has greatly enlarged, and importantly, ribozymes have been accompanied by DNAzymes. Current areas of research are the engineering of allosteric ribozymes for artificial regulation of gene expression, the design of ribozymes and DNAzymes for medicinal and environmental diagnostics, and the demonstration of RNA world relevant ribozyme activities. In addition, new catalytic motifs or novel genomic locations of known motifs continue to be discovered in all branches of life by the help of high-throughput bioinformatic approaches. Understanding the biological role of the catalytic RNA motifs widely distributed in diverse genetic contexts belongs to the big challenges of future RNA research.


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