scholarly journals Archaeal and bacterial communities in deep-sea hydrogenetic ferromanganese crusts on old seamounts of the northwestern Pacific

PLoS ONE ◽  
2017 ◽  
Vol 12 (2) ◽  
pp. e0173071 ◽  
Author(s):  
Shota Nitahara ◽  
Shingo Kato ◽  
Akira Usui ◽  
Tetsuro Urabe ◽  
Katsuhiko Suzuki ◽  
...  
PLoS ONE ◽  
2020 ◽  
Vol 15 (2) ◽  
pp. e0228483
Author(s):  
Akira Iguchi ◽  
Miyuki Nishijima ◽  
Yuki Yoshioka ◽  
Aika Miyagi ◽  
Ryuichi Miwa ◽  
...  

2019 ◽  
Vol 58 (4) ◽  
pp. 903-917 ◽  
Author(s):  
Manman Ma ◽  
Yu Zhen ◽  
Tiezhu Mi

AbstractStudies of the community structures of bacteria in marine aerosols of different particle sizes have not been reported. Aerosol samples were collected using a six-stage bioaerosol sampler over the Bohai Sea, the Yellow Sea, and northwestern Pacific Ocean in the spring of 2014. The diversity and composition of these samples were investigated by Illumina high-throughput sequencing, and 130 genera were detected in all of the samples; the most abundant bacterial genus was Bacteroides, followed by Prevotella and Megamonas. The Chao1 and Shannon diversity indices ranged from 193 to 1044 and from 5.44 to 8.33, respectively. The bacterial community structure in coarse particles (diameter larger than 2.1 μm) was more complex and diverse than that in fine particles (diameter less than 2.1 μm) in marine bioaerosols from over the Yellow Sea and northwestern Pacific Ocean, while the opposite trend was observed for samples collected over the Bohai Sea. Although we were sampling over marine regions, the sources of the bioaerosols were mostly continental. Temperature and wind speed significantly influenced the bacterial communities in marine aerosols of different particle sizes. There may be a bacterial background in the atmosphere in the form of several dominant taxa, and the bacterial communities are likely mixed constantly during transmission.


2020 ◽  
Vol 40 (5) ◽  
pp. 556-562
Author(s):  
Hiromi K Watanabe ◽  
Chong Chen ◽  
Shigeaki Kojima ◽  
Shogo Kato ◽  
Hiroyuki Yamamoto

Abstract Genetic connectivity provides a basis for evaluating the resilience of animal communities by elucidating gene flow and serves as a proxy for realized dispersal through planktonic larval dispersal, settlement, and reproductive success. Gandalfus yunohana (Takeda, Hashimoto & Ohta, 2000) is a brachyuran crab endemic to deep-sea hydrothermal vents in the northwestern Pacific. Although an iconic and often dominant species, the connectivity among its populations is yet to be examined. We obtained barcoding sequences of the mitochondrial COI gene of G. yunohana from four vent fields including two on the Izu Arc, one on the northern Mariana Arc, and one in the Okinawa Trough. Genetic diversity of populations on the Izu and northern Mariana arcs were similar and shared the dominant haplotypes, showing no genetic subdivision regardless of the habitat depth. The Okinawa Trough population, for which only one specimen was available, was not genetically different from specimens from the Izu/Mariana arc populations. Estimation of the number of immigrants among populations suggests that the migration from north to south is higher than in the reverse direction. Our results resonate with previous laboratory-culture experiments, suggesting a high dispersal capability for G. yunohana. Visual observations and sampling, however, suggest that G. yunohana is exceedingly rare in the Okinawa Trough. This perhaps results from a lack of sufficient larval supply from the Izu-Bonin-Mariana Arc vents, and there may not be a reproductive population in the Okinawa Trough.


2006 ◽  
Vol 72 (2) ◽  
pp. 1680-1683 ◽  
Author(s):  
Kevin Penn ◽  
Dongying Wu ◽  
Jonathan A. Eisen ◽  
Naomi Ward

ABSTRACT Although microbes associated with shallow-water corals have been reported, deepwater coral microbes are poorly characterized. A cultivation-independent analysis of Alaskan seamount octocoral microflora showed that Proteobacteria (classes Alphaproteobacteria and Gammaproteobacteria), Firmicutes, Bacteroidetes, and Acidobacteria dominate and vary in abundance. More sampling is needed to understand the basis and significance of this variation.


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