A 3D Chiral Hydrogen Bond Framework Based on Phenanthrolinium Hydrogen 4,5-Dichlorophthalate: Crystal Structure and Luminescent Properties

2012 ◽  
Vol 67 (1) ◽  
pp. 85-88 ◽  
Author(s):  
Bing An ◽  
Yan Bai ◽  
Fan Yang
Keyword(s):  
Solid State ◽  
Hydrogen Bonds ◽  
Uv Spectroscopy ◽  
Luminescent Properties ◽  
Aromatic Rings ◽  
Intermolecular Hydrogen Bonds ◽  
X Ray ◽  
Face To Face ◽  
X Ray Crystallography ◽  
Intramolecular Hydrogen

A salt with the composition [C12H9N2][C8H3Cl2O4] (1) with 4,5-dichlorophthalic acid and 1,10- phenanthroline (phen) has been synthesized and characterized by IR, UV spectroscopy, elemental analysis, and X-ray crystallography. Compound 1 represents a 3D chiral supramolecular framework containing monohelical chains (21 axis) through multiform C-H· · ·O, O-H· · · O, N-H· · ·N intramolecular hydrogen bonds and C-H· · ·O, N-H· · ·O intermolecular hydrogen bonds. Otherwise, two types of face-to-face π · · ·π interactions between the aromatic rings are found in the solid state. The luminescent properties of compound 1 were investigated in the solid state at room temperature

scholarly journals 1-[N-Methyl-N-(Phenyl)amino]-3- (4-Methylphenyl)Thiourea

Molbank ◽  
10.3390/m1052 ◽  
2019 ◽  
Vol 2019 (1) ◽  
pp. M1052 ◽  
Author(s):  
Chien Yeo ◽  
Edward Tiekink
Keyword(s):  
Hydrogen Bond ◽  
Solid State ◽  
Hydrogen Bonds ◽  
Single Crystal ◽  
Elemental Analysis ◽  
Title Compound ◽  
Molecular Conformation ◽  
Phenyl Hydrazine ◽  
X Ray ◽  
X Ray Crystallography

The title compound, 1-[N-methyl-N-(phenyl)amino]-3-(4-methylphenyl)thiourea (1), was synthesized by the reaction of 1-methyl-1-phenyl hydrazine and 4-tolyl isothiocyanate, and was characterized by spectroscopy (1H and 13C{1H} NMR, IR, and UV), elemental analysis as well as by single crystal X-ray crystallography. In the solid state, the molecule exists as the thioamide tautomer and features an anti-disposition of the thioamide–N–H atoms; an intramolecular N–H⋯N hydrogen bond is noted. The molecular conformation resembles that of the letter L. In the molecular packing, thioamide-N1–H⋯S1(thione) hydrogen bonds lead to centrosymmetric eight-membered {⋯HNCS}2 synthons. The dimers are assembled into a supramolecular layer in the bc-plane by phenyl- and methyl-C–H⋯π(phenyl) interactions.

scholarly journals Solid-state tautomeric structure and invariom refinement of a novel and potent HIV integrase inhibitor

2013 ◽  
Vol 69 (3) ◽  
pp. 285-288 ◽  
Author(s):  
John Bacsa ◽  
Maurice Okello ◽  
Pankaj Singh ◽  
Vasu Nair
Keyword(s):  
Solid State ◽  
Integrase Inhibitor ◽  
Correlation Spectroscopy ◽  
Hiv Integrase ◽  
Acta Cryst ◽  
X Ray ◽  
X Ray Crystallography ◽  
Molecular Charge ◽  
Intramolecular Hydrogen ◽  
C Nmr

The conformation and tautomeric structure of (Z)-4-[5-(2,6-difluorobenzyl)-1-(2-fluorobenzyl)-2-oxo-1,2-dihydropyridin-3-yl]-4-hydroxy-2-oxo-N-(2-oxopyrrolidin-1-yl)but-3-enamide, C27H22F3N3O5, in the solid state has been resolved by single-crystal X-ray crystallography. The electron distribution in the molecule was evaluated by refinements with invarioms, aspherical scattering factors by the method of Dittrichet al.[Acta Cryst.(2005), A61, 314–320] that are based on the Hansen–Coppens multipole model [Hansen & Coppens (1978).Acta Cryst.A34, 909–921]. The β-diketo portion of the molecule exists in the enol form. The enol –OH hydrogen forms a strong asymmetric hydrogen bond with the carbonyl O atom on the β-C atom of the chain. Weak intramolecular hydrogen bonds exist between the weakly acidic α-CH hydrogen of the keto–enol group and the pyridinone carbonyl O atom, and also between the hydrazine N—H group and the carbonyl group in the β-position from the hydrazine N—H group. The electrostatic properties of the molecule were derived from the molecular charge density. The molecule is in a lengthened conformation and the rings of the two benzyl groups are nearly orthogonal. Results from a high-field1H and13C NMR correlation spectroscopy study confirm that the same tautomer exists in solution as in the solid state.

Heterocyclic Tautomerism. II. 4-Acylpyrazolones. X-Ray Crystal Structures of 4-Benzoyl-5-methyl-2-phenylpyrazol-3(2H)-one and 4-Acetoacetyl-3-methyl-1-phenylpyrazol-5-ol

1985 ◽  
Vol 38 (3) ◽  
pp. 401 ◽  
Author(s):  
MJ O'Connell ◽  
CG Ramsay ◽  
PJ Steel
Keyword(s):  
Hydrogen Bonds ◽  
Crystal Structures ◽  
Room Temperature ◽  
Crystalline Form ◽  
Intermolecular Hydrogen Bonds ◽  
Intramolecular Hydrogen Bonds ◽  
X Ray ◽  
Intramolecular Hydrogen

The colourless crystalline form of the benzoylpyrazolone (2) has molecules with the NH structure (2c) stabilized by intermolecular hydrogen bonds. At room temperature crystals are monoclinic: P21/c, a 13.508(5), b 9.124(4), c 11.451(3)Ǻ, β 90.80(3)°, Z4; the structure was refined to R 0.059, Rw 0.048. The acetoacetylpyrazolone (3) has the OH structure (3c) with two intramolecular hydrogen bonds. At 193 K crystals are triclinic: Pī , a 7.142(2), b 13.704(8), c 14.699(7)Ǻ, α 117.36(3), β 96.87(3), γ 93.73(3)°, Z 4; the structure was refined to R 0.049, Rw 0.054.

scholarly journals Unusual Effects of Intramolecular Hydrogen Bonds and Dipole Interaction on FTIR and NMR of Some Imines

2019 ◽  
pp. 1-6 ◽  
Author(s):  
Elham Abdalrahem Bin Selim ◽  
Mohammed Hadi Al–Douh
Keyword(s):  
Hydrogen Bonds ◽  
Chemical Shifts ◽  
Dipole Interaction ◽  
Intramolecular Hydrogen Bonds ◽  
X Ray ◽  
X Ray Crystallography ◽  
Dipole Interactions ◽  
Intramolecular Hydrogen

Unusual effects of intramolecular hydrogen bonds and dipole interactions are investigated using FTIR, NMR and X-Ray crystallography analyses of some imines. These phenomena affect both FTIR absorptions and chemical shifts.

scholarly journals N-[2-(Methylsulfanyl)phenyl]-2-sulfanylbenzamide

2012 ◽  
Vol 68 (8) ◽  
pp. o2400-o2400
Author(s):  
Chang-Chih Hsieh ◽  
Hon Man Lee ◽  
Yih-Chern Horng
Keyword(s):  
Hydrogen Bond ◽  
Hydrogen Bonds ◽  
Intramolecular Hydrogen Bond ◽  
Title Compound ◽  
Aromatic Rings ◽  
Intermolecular Hydrogen Bonds ◽  
Methyl Group ◽  
Interplanar Angle ◽  
Compound C ◽  
Intramolecular Hydrogen

In the title compound, C14H13NOS2, the S atom with the methyl group is involved in an intramolecular hydrogen bond with the amido H atom. In the crystal, the sulfanyl H atoms form intermolecular hydrogen bonds with the O atoms, connecting the molecules into zigzag chains along thecaxis. The two aromatic rings exhibit a small interplanar angle of 16.03 (9)°.

A new modification of [Ag4Br4(PPh3)4]: synthesis, structure and properties

2018 ◽  
Vol 73 (10) ◽  
pp. 733-738 ◽  
Author(s):  
Xintong Han ◽  
Shanshan Mao ◽  
Chuang Li ◽  
Kesheng Shen ◽  
Xinkui Shi ◽  
...  
Keyword(s):  
Solid State ◽  
Ir Spectroscopy ◽  
Hydrogen Bonds ◽  
Elemental Analysis ◽  
Supramolecular Structure ◽  
Chair Conformation ◽  
Cyclic Voltammograms ◽  
Structure And Properties ◽  
X Ray ◽  
X Ray Crystallography

AbstractA new modification of the homometallic silver(I) cluster [Ag4Br4(PPh3)4] has been prepared and characterized by elemental analysis, UV/Vis and IR spectroscopy, and X-ray crystallography. The tetramer shows a polycyclic structure with a chair conformation. The bromine atoms adopt μ2- and μ3-bridging modes. The shortest Ag–Ag distance in the cluster is 3.159(2) Å, which indicates significant Ag–Ag interactions. A supramolecular structure is arranged by hydrogen bonds (C–H···Br). Cyclic voltammograms of the cluster indicate a quasi-reversible Ag+/Ag couple. The fluorescence properties of the ligand and the Ag(I) cluster were studied in the solid state. The emission peaks of the Ag(I) cluster are attributed to ligand-centered luminescence.

Structure and hydrogen bonding in 2,4-dihydroxybenzoic acid at 90, 100, 110 and 150 K; a theoretical and single-crystal X-ray diffraction study

2007 ◽  
Vol 63 (2) ◽  
pp. 303-308 ◽  
Author(s):  
Andrew Parkin ◽  
Martin Adam ◽  
Richard I. Cooper ◽  
Derek S. Middlemiss ◽  
Chick C. Wilson
Keyword(s):  
Hydrogen Bonding ◽  
Solid State ◽  
Hydrogen Bonds ◽  
X Ray Diffraction ◽  
Dihydroxybenzoic Acid ◽  
X Ray ◽  
Hydrogen Bond System ◽  
Proton Disorder ◽  
Intramolecular Hydrogen ◽  
Carboxylic Acid Dimer

A new polymorph of 2,4-dihydroxybenzoic acid is reported. The structure was characterized by multiple-temperature X-ray diffraction and solid-state DFT computations. The material shows a geometric pattern of hydrogen bonding consistent with cooperativity between the intermolecular carboxylic acid dimer and intramolecular hydrogen bonds. The presence of proton disorder within this hydrogen-bond system, which would support such a cooperative model, was not fully ruled out by the initial X-ray studies. However, solid-state calculations on the three possible end-point tautomers indicate that the dominant crystallographically observed configuration is substantially lower in energy than the other tautomers (by at least 9 kJ mol−1), indicating that no disorder should be expected. It is therefore concluded that no disorder is observed either in the intra- or intermolecular hydrogen bonds of the title compound and that the cooperativity between the hydrogen bonds is not present within the temperature range studied.

scholarly journals 4-(4-Chlorophenyl)-4,5-dihydro-1H-1,2,4-triazole-5-thione

Molbank ◽  
10.3390/m1047 ◽  
2019 ◽  
Vol 2019 (1) ◽  
pp. M1047 ◽  
Author(s):  
Chien Yeo ◽  
Ainnul Azizan ◽  
Edward Tiekink
Keyword(s):  
Hydrogen Bonds ◽  
Structure Determination ◽  
Title Compound ◽  
Uv Spectroscopy ◽  
Three Dimensional ◽  
Membered Ring ◽  
X Ray ◽  
X Ray Crystallography ◽  
Orthogonal Relationship ◽  
Ir And Uv Spectroscopy

The title compound, 4-(4-chlorophenyl)-4,5-dihydro-1H-1,2,4-triazole-5-thione (1), was synthesized by a hetero-cyclization reaction of 4-chlorophenyl isothiocyanate and formic hydrazide. Compound 1 was characterized by a single-crystal X-ray structure determination as well as 1H and 13C{1H} NMR, IR, and UV spectroscopy, and microelemental analysis. X-ray crystallography on 1 confirms the molecule exists as the thione tautomer and shows the five-membered ring to be planar and to form a dihedral angle of 82.70(5)° with the appended chlorophenyl ring, indicating an almost orthogonal relationship. In the molecular packing, supramolecular dimers are formed via thioamide-N–H⋯S(thione) hydrogen bonds and these are connected by C=S⋯π(triazolyl) and C-Cl⋯π(triazolyl) interactions, leading to a three-dimensional architecture.

scholarly journals (3-Ammonio-2,2-dimethyl-propyl)carbamate Dihydrate

Molbank ◽  
10.3390/m1015 ◽  
2018 ◽  
Vol 2018 (3) ◽  
pp. M1015
Author(s):  
Jaqueline Heimgert ◽  
Dennis Neumann ◽  
Guido Reiss
Keyword(s):  
Hydrogen Bond ◽  
Raman Spectroscopy ◽  
Acetic Acid ◽  
Hydrogen Bonds ◽  
Chain Structure ◽  
X Ray Diffraction ◽  
Intermolecular Hydrogen Bonds ◽  
X Ray ◽  
Title Molecule ◽  
Intramolecular Hydrogen

(3-Ammonio-2,2-dimethylpropyl)carbamate dihydrate was synthesised. The title compound was characterised by single crystal X-ray diffraction and IR-/Raman-spectroscopy. It has been demonstrated that a mixture of dilute acetic acid and 2,2-dimethyl-1,3-diaminopropane is able to capture CO2 spontaneously from the atmosphere. An intramolecular hydrogen bond stabilises the conformation of the ylide-type title molecule. Intermolecular hydrogen bonds between all moieties connect them to a strand-type chain structure.

scholarly journals Intermolecular Hydrogen and Halogen Bonds in Fluorinated Benzimidazoles

2014 ◽  
Vol 70 (a1) ◽  
pp. C643-C643
Author(s):  
Rosa M Claramunt ◽  
Marta Pérez-Torralba ◽  
M. Ángeles García ◽  
Concepción López ◽  
M. Carmen Torralba ◽  
...  
Keyword(s):  
Hydrogen Bonds ◽  
Crystal Packing ◽  
Weak Interactions ◽  
Bond Distance ◽  
Imidazole Ring ◽  
Halogen Bonds ◽  
Aromatic Rings ◽  
Molecular Plane ◽  
X Ray ◽  
X Ray Crystallography

After hydrogen bonds (HB) the most studied of related weak interactions are the halogen bonds (XB). The competition between these two interactions as well as their interplay to determine the crystal packing of organic derivatives is a subject of interest. Most the studies related to XB concerns the heaviest halogen atoms, I and Br, less Cl and much less F, because the interaction energy decreases in this order. [1,2] We present here our studies on the structure of five tetrafluorinated benzazoles by X-ray crystallography and solid-state NMR, a powerful synergic mixture of techniques. The compounds are 4,5,6,7-tetrafluoro-1H-benzimidazole (1), 4,5,6,7-tetrafluoro-2-(trifluoromethyl)-1H-benzimidazole (2), 4,5,6,7-tetrafluoro-1H-benzimidazole-2(3H)-one (3), 4,5,6,7-tetrafluoro-1-methyl-1H-benzimidazole-2(3H)-one (4), and 4,5,6,7-tetrafluoro-1,3-dimethyl-1H-benzimidazole-2(3H)-one (5). As a common general feature, these compounds are quite planar due to the presence of the two aromatic rings. The existence of the methyl groups as substituent in the nitrogen atoms does not modify the planarity of the molecule. The bond distances and angles are in agreement with the expected ones for this kind of compounds. The presence of the carbonyl group induces some electronic changes in the imidazole ring that is resembled in the lengthening of the C2N3 bond distance and in a higher deviation of C2 atom from the molecular plane. Moreover, all the compounds show one or more interactions by strong linear hydrogen bonds, which lead to the formation of chains that, in some cases, can exhibit additional interactions via pi-pi and/or F···F contacts spreading out the dimensionality of the structure in the crystal. [3] The distribution of the F···F contacts in compounds 1-5 is similar to those of the literature and includes for 4,5,6,7-tetrafluoro-1H-benzimidazole-2(3H)-one (3) one of the shortest F···F distances ever reported [2.596(3) Å]. Two polymorphs of compound 4 are identified.

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