Isolation and Partial Characterization of a Manganese Requiring ʟ-Arginine Metabolizing Enzyme Being Present in Photosystem II Complexes of Spinach and Tobacco

1995 ◽  
Vol 50 (9-10) ◽  
pp. 638-651 ◽  
Author(s):  
Achim E. Gau ◽  
Hubert H. Thole ◽  
Elfriede K. Pistorius
Keyword(s):  
Photosystem Ii ◽  
Water Oxidation ◽  
Cation Binding ◽  
Active Group ◽  
Anion Exchange Column ◽  
Ps Ii ◽  
Cation Binding Site ◽  
Redox Active ◽  
Metabolizing Enzyme ◽  
Ph Range

Abstract A low ʟ-arginine metabolizing enzyme (L-AME) activity leading to ornithine, urea and additional products not identified so far could be detected in photosystem II (PS II) membranes of spinach and of the chlorophyll deficient tobacco mutant Su/su. The detectable L-AME activity was very low in untreated PS II membranes, but increased significantly (about 10 fold) when the extrinsic peptides (psbO, P and Q gene products) were removed - suggesting that the L-AME is exposed at the lumen side of PS II. It was possible to isolate the detergent-solubilized protein from CaCl2-washed PS II membranes of spinach by a combination of anion and cation exchange columns. On the basis of SDS PAGE the protein was homogenous and had an apparent molecular mass of 7 kDa. N-terminal sequencing of the polypeptide gave a contiguous sequence of 20 amino acids showing no homologies to PS II polypeptides as yet sequenced. After chromatography of the L-AME on an anion exchange column at pH 9.5 (last purification step) a completely inactive enzyme was obtained. Maximal reactivation was achieved by dialyzing the protein against Hepes-NaOH buffer in the pH range of 6.5 to 7.5 containing 100 mᴍ chloride or sulfate (being the most effective anions). The L-AME activity was totally dependent on manganese added to the reaction mixture. Moreover, there were indications of a second cation binding site being more sequestered and requiring bound Ca2+ or Mn2+ for activity (Sr2+ was less effective and Mg2+ was ineffective). There are indications that the protein contains a redox active group - possibly an aminoacid- derived quinonoid (based on a redox cycling assay with glycine and nitroblue tetrazolium). The capability of this PS II associated protein to bind the cofactors of water oxidation and having a redox active group (preliminary results) suggests that this protein might be functional in photosynthetic water oxidation. This is further supported by the fact that the isolated L-AME has a low catalase activity

Photosystem II: the engine of life

2003 ◽  
Vol 36 (1) ◽  
pp. 71-89 ◽  
Author(s):  
James Barber
Keyword(s):  
High Resolution ◽  
Photosystem Ii ◽  
Water Oxidation ◽  
Structural Models ◽  
Reaction Centre ◽  
Ps Ii ◽  
X Ray ◽  
X Ray Crystallography ◽  
Redox Active ◽  
Resolution Electron

1. Introduction 712. Electron transfer in PS II 723. (Mn)4cluster and mechanism of water oxidation 734. Organization and structure of the protein subunits 755. Organization of chlorophylls and redox active cofactors 816. Implications arising from the structural models 827. Perspectives 848. Acknowledgements 869. Addendum 8610. References 87Photosystem II (PS II) is a multisubunit membrane protein complex, which uses light energy to oxidize water and reduce plastoquinone. High-resolution electron cryomicroscopy and X-ray crystallography are revealing the structure of this important molecular machine. Both approaches have contributed to our understanding of the organization of the transmembrane helices of higher plant and cyanobacterial PS II and both indicate that PS II normally functions as a dimer. However the high-resolution electron density maps derived from X-ray crystallography currently at 3·7/3·8 Å, have allowed assignments to be made to the redox active cofactors involved in the light-driven water–plastoquinone oxidoreductase activity and to the chlorophyll molecules that absorb and transfer energy to the reaction centre. In particular the X-ray work has identified density that can accommodate the four manganese atoms which catalyse the water-oxidation process. The Mn cluster is located at the lumenal surface of the D1 protein and approximately 7 Å from the redox active tyrosine residue (YZ) which acts an electron/proton transfer link to the primary oxidant P680.+. The lower resolution electron microscopy studies, however, are providing structural models of larger PS II supercomplexes that are ideal frameworks in which to incorporate the X-ray derived structures.

scholarly journals Untangling the sequence of events during the S2→ S3transition in photosystem II and implications for the water oxidation mechanism

2020 ◽  
Vol 117 (23) ◽  
pp. 12624-12635 ◽  
Author(s):  
Mohamed Ibrahim ◽  
Thomas Fransson ◽  
Ruchira Chatterjee ◽  
Mun Hon Cheah ◽  
Rana Hussein ◽  
...  
Keyword(s):  
Photosystem Ii ◽  
Water Oxidation ◽  
Donor Site ◽  
Oxidation Mechanism ◽  
Oxygenic Photosynthesis ◽  
Acceptor Site ◽  
Oxygen Evolving Complex ◽  
Ps Ii ◽  
Sequence Of Events ◽  
Large Channel

In oxygenic photosynthesis, light-driven oxidation of water to molecular oxygen is carried out by the oxygen-evolving complex (OEC) in photosystem II (PS II). Recently, we reported the room-temperature structures of PS II in the four (semi)stable S-states, S1, S2, S3, and S0, showing that a water molecule is inserted during the S2→ S3transition, as a new bridging O(H)-ligand between Mn1 and Ca. To understand the sequence of events leading to the formation of this last stable intermediate state before O2formation, we recorded diffraction and Mn X-ray emission spectroscopy (XES) data at several time points during the S2→ S3transition. At the electron acceptor site, changes due to the two-electron redox chemistry at the quinones, QAand QB, are observed. At the donor site, tyrosine YZand His190 H-bonded to it move by 50 µs after the second flash, and Glu189 moves away from Ca. This is followed by Mn1 and Mn4 moving apart, and the insertion of OX(H) at the open coordination site of Mn1. This water, possibly a ligand of Ca, could be supplied via a “water wheel”-like arrangement of five waters next to the OEC that is connected by a large channel to the bulk solvent. XES spectra show that Mn oxidation (τ of ∼350 µs) during the S2→ S3transition mirrors the appearance of OXelectron density. This indicates that the oxidation state change and the insertion of water as a bridging atom between Mn1 and Ca are highly correlated.

scholarly journals Electron, proton and hydrogen–atom transfers in photosynthetic water oxidation

2002 ◽  
Vol 357 (1426) ◽  
pp. 1383-1394 ◽  
Author(s):  
Cecilia Tommos
Keyword(s):  
Photosystem Ii ◽  
Proton Transfer ◽  
Water Oxidation ◽  
Oxidation Mechanism ◽  
Bulk Solution ◽  
Hydrogen Atoms ◽  
Redox Active ◽  
Hydrogen Atom Transfers ◽  
Reduce Carbon Dioxide ◽  
Photosynthetic Water Oxidation

When photosynthetic organisms developed so that they could use water as an electron source to reduce carbon dioxide, the stage was set for efficient proliferation. Algae and plants spread globally and provided the foundation for our atmosphere and for O 2 –based chemistry in biological systems. Light–driven water oxidation is catalysed by photosystem II, the active site of which contains a redox–active tyrosine denoted Y Z , a tetramanganese cluster, calcium and chloride. In 1995, Gerald Babcock and co–workers presented the hypothesis that photosynthetic water oxidation occurs as a metallo–radical catalysed process. In this model, the oxidized tyrosine radical is generated by coupled proton/electron transfer and re–reduced by abstracting hydrogen atoms from substrate water or hydroxide–ligated to the manganese cluster. The proposed function of Y Z requires proton transfer from the tyrosine site upon oxidation. The oxidation mechanism of Y Z in an inhibited and O 2 –evolving photosystem II is discussed. Domino–deprotonation from Y Z to the bulk solution is shown to be consistent with a variety of data obtained on metal–depleted samples. Experimental data that suggest that the oxidation of Y Z in O 2 –evolving samples is coupled to proton transfer in a hydrogen–bonding network are described. Finally, a dielectric–dependent model for the proton release that is associated with the catalytic cycle of photosystem II is discussed.

Isolation and Partial Characterization of a Manganese and Chloride Binding Protein Present in Highly Purified Photosystem II Complexes of the Thermophilic Cyanobacterium Synechococcus sp.: The Protein Being Detected by Its L -Arginine Metabolizing Activity

1994 ◽  
Vol 49 (1-2) ◽  
pp. 95-107 ◽  
Author(s):  
Mathias Ruff ◽  
Elfriede K. Pistorius
Keyword(s):  
Photosystem Ii ◽  
Maximal Activity ◽  
Chloride Binding ◽  
Ps Ii ◽  
Thermophilic Cyanobacterium ◽  
Unknown Structure ◽  
Synechococcus Sp ◽  
Metabolizing Enzyme ◽  
Assay Conditions

Photosystem II complexes were solubilized with the detergent sulfobetaine 12 from thylakoid membranes of the thermophilic cyanobacterium Synechococcus sp. and purified by two sucrose gradient centrifugations and by chromatography on a Mono Q column. In such photosystem II complexes having a photosynthetic O2, evolving activity of 2938 μmol O2 evolved/mg chlorophyll x h, an ʟ-arginine metabolizing activity leading to ornithine and urea as major products, could be shown to be present. Besides ornithine and urea, a product (or products) of yet unknown structure is formed in addition - especially under aerobic conditions. This activity remained associated with photosystem II complexes even after substantial additional treatments to remove loosely bound proteins. On chlorophyll basis the maximal activity obtained under optimal assay conditions corresponded to 94 μmol ornithine formed/mg chlorophyll x h. This PS II associated, ʟ-arginine metabolizing enzyme was isolated (utilizing a manganese charged chelating Sepharose 6 B column) and partially characterized. It could be shown that this enzyme requires manganese and chloride for its ʟ-arginine metabolizing activity and that manganese becomes totally lost during purification indicating that manganese is bound to a fairly exposed site on the protein. Since it is rather unlikely that two different manganese and chloride binding proteins are present in such highly purified photosystem II complexes, the possibility of this protein being the water oxidizing enzyme will be discussed. Whether the manganese and chloride requiring ʟ-arginine metabolizing activity of this protein which provided a suitable assay for its isolation from photosystem II complexes, has any physiological significance, can not be answered at the present time.

Pivotal role of the redox-active tyrosine in driving the water splitting catalyzed by photosystem II

2020 ◽  
Vol 22 (1) ◽  
pp. 273-285 ◽  
Author(s):  
Shin Nakamura ◽  
Matteo Capone ◽  
Daniele Narzi ◽  
Leonardo Guidoni
Keyword(s):  
Hydrogen Bond ◽  
Photosystem Ii ◽  
Water Splitting ◽  
Oxidation State ◽  
Water Oxidation ◽  
Oxidation Catalysis ◽  
Pivotal Role ◽  
Redox Active ◽  
Water Oxidation Catalysis

TyrZ oxidation state triggers hydrogen bond modification in the water oxidation catalysis.

scholarly journals Water oxidation chemistry of photosystem II

2007 ◽  
Vol 363 (1494) ◽  
pp. 1211-1219 ◽  
Author(s):  
Gary W Brudvig
Keyword(s):  
Photosystem Ii ◽  
Water Oxidation ◽  
Oxidation Mechanism ◽  
Intermediate Species ◽  
X Ray ◽  
Redox Active ◽  
Ca Ions ◽  
Oxidation Chemistry ◽  
Chemical Problem ◽  
Mechanism Of The Reaction

Photosystem II (PSII) uses light energy to split water into protons, electrons and O 2 . In this reaction, nature has solved the difficult chemical problem of efficient four-electron oxidation of water to yield O 2 without significant amounts of reactive intermediate species such as superoxide, hydrogen peroxide and hydroxyl radicals. In order to use nature's solution for the design of artificial catalysts that split water, it is important to understand the mechanism of the reaction. The recently published X-ray crystal structures of cyanobacterial PSII complexes provide information on the structure of the Mn and Ca ions, the redox-active tyrosine called Y Z and the surrounding amino acids that comprise the O 2 -evolving complex (OEC). The emerging structure of the OEC provides constraints on the different hypothesized mechanisms for O 2 evolution. The water oxidation mechanism of PSII is discussed in the light of biophysical and computational studies, inorganic chemistry and X-ray crystallographic information.

A New-Type Photosystem II Inhibitor which Blocks Electron Transport in Water-Oxidation System

1989 ◽  
Vol 44 (3-4) ◽  
pp. 271-279 ◽  
Author(s):  
H. Koike ◽  
T. Asami ◽  
S. Yoshida ◽  
N. Takahashi ◽  
Y. Inoue
Keyword(s):  
Electron Transport ◽  
Low Temperature ◽  
Photosystem Ii ◽  
Water Oxidation ◽  
Mode Of Action ◽  
The Other ◽  
Ps Ii ◽  
Abnormal Band ◽  
New Type ◽  
Oxidation System

Abstract The mode of action of three types of conjugated enamine compounds was investigated by means of thermoluminescence measurement. Cyanoacrylate and 2-(l-ethoxyethylam inom ethylidene)- 4-dodecyl-5,5-dim ethyl-cyclohexane-1,3-dione (ACm12) converted the B-band (30 °C) arising from S2QB- charge recombination to a downshifted 6 °C-band. This band was proved to be identical with the DCM U-induced Q-band (6 °C) arising from S2QA- recombination, indicating that these two compounds block QA to QB electron transport. 3-(1-dodecylam inopropyridene)-6- methyl-2H-pyran-2,4-dione (APp12 ), on the other hand, induced an abnormal band peaking at 15 °C between the Q-band and B-band. From the gradual downshift of its peak temperature in titration experiments, this band was assigned to arise from a modified S2QB- charge pair, in which the properties of either QB- or S2 is altered. The 15 °C-band showed normal oscillation during the first 2 flashes, but the oscillation was interrupted thereafter. Another therm oluminescence analysis by use of post flash low temperature illumination protocol revealed that APp12 affects neither QA to QB nor QB2- to PQ electron transport, but specifically blocks S3 to S0 transition. These results indicate that APp12 is a new-type PS II inhibitor.

scholarly journals Structural dynamics in the water and proton channels of photosystem II during the S2 to S3 transition

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Rana Hussein ◽  
Mohamed Ibrahim ◽  
Asmit Bhowmick ◽  
Philipp S. Simon ◽  
Ruchira Chatterjee ◽  
...  
Keyword(s):  
Amino Acid ◽  
Photosystem Ii ◽  
Water Oxidation ◽  
Water Molecules ◽  
Back Reaction ◽  
Side Chains ◽  
Oxygen Evolving Complex ◽  
Proton Release ◽  
Ps Ii ◽  
Amino Acid Side Chains

AbstractLight-driven oxidation of water to molecular oxygen is catalyzed by the oxygen-evolving complex (OEC) in Photosystem II (PS II). This multi-electron, multi-proton catalysis requires the transport of two water molecules to and four protons from the OEC. A high-resolution 1.89 Å structure obtained by averaging all the S states and refining the data of various time points during the S2 to S3 transition has provided better visualization of the potential pathways for substrate water insertion and proton release. Our results indicate that the O1 channel is the likely water intake pathway, and the Cl1 channel is the likely proton release pathway based on the structural rearrangements of water molecules and amino acid side chains along these channels. In particular in the Cl1 channel, we suggest that residue D1-E65 serves as a gate for proton transport by minimizing the back reaction. The results show that the water oxidation reaction at the OEC is well coordinated with the amino acid side chains and the H-bonding network over the entire length of the channels, which is essential in shuttling substrate waters and protons.

scholarly journals Low-temperature photochemistry in photosystem II from Thermosynechococcus elongatus induced by visible and near-infrared light

2007 ◽  
Vol 363 (1494) ◽  
pp. 1203-1210 ◽  
Author(s):  
Alain Boussac ◽  
Miwa Sugiura ◽  
Thanh-Lan Lai ◽  
A. William Rutherford
Keyword(s):  
Photosystem Ii ◽  
Water Oxidation ◽  
Near Infrared ◽  
Infrared Light ◽  
Tyrosyl Radical ◽  
Paramagnetic Resonance ◽  
Near Infrared Light ◽  
Redox Active ◽  
Electron Paramagnetic ◽  
Haem Iron

The active site for water oxidation in photosystem II (PSII) consists of a Mn 4 Ca cluster close to a redox-active tyrosine residue (TyrZ). The enzyme cycles through five sequential oxidation states (S 0 to S 4 ) in the water oxidation process. Earlier electron paramagnetic resonance (EPR) work showed that metalloradical states, probably arising from the Mn 4 cluster interacting with TyrZ, can be trapped by illumination of the S 0 , S 1 and S 2 states at cryogenic temperatures. The EPR signals reported were attributed to S 0 TyrZ, S 1 TyrZ and S 2 TyrZ, respectively. The equivalent states were examined here by EPR in PSII isolated from Thermosynechococcus elongatus with either Sr or Ca associated with the Mn 4 cluster. In order to avoid spectral contributions from the second tyrosyl radical, TyrD, PSII was used in which Tyr160 of D2 was replaced by phenylalanine. We report that the metalloradical signals attributed to TyrZ interacting with the Mn cluster in S 0 , S 1 , S 2 and also probably the S 3 states are all affected by the presence of Sr. Ca/Sr exchange also affects the non-haem iron which is situated approximately 44 Å units away from the Ca site. This could relate to the earlier reported modulation of the potential of Q A by the occupancy of the Ca site. It is also shown that in the S 3 state both visible and near-infrared light are able to induce a similar Mn photochemistry.

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