scholarly journals Feasibility Study of Odor Biosensor Using Dissociate Neuronal Culture with Gene Expression of Ionotropic Odorant Receptors

2011 ◽  
Vol 131 (1) ◽  
pp. 35-41 ◽  
Author(s):  
Norio Tanada ◽  
Takeshi Sakurai ◽  
Hidefumi Mitsuno ◽  
Douglas Bakkum ◽  
Ryohei Kanzaki ◽  
...  
2020 ◽  
Vol 40 ◽  
pp. S408-S409
Author(s):  
A. Lopachev ◽  
A.B. Volnova ◽  
Y.A. Timoshina ◽  
R.B. Kazanskaya ◽  
M.A. Lagarkova ◽  
...  

eNeuro ◽  
2019 ◽  
Vol 7 (1) ◽  
pp. ENEURO.0386-19.2019 ◽  
Author(s):  
Corey G. Duke ◽  
Katherine E. Savell ◽  
Jennifer J. Tuscher ◽  
Robert A. Phillips ◽  
Jeremy J. Day

2010 ◽  
Vol 68 ◽  
pp. e98
Author(s):  
Norio Tanada ◽  
Takeshi Sakurai ◽  
Hidefumi Mitsuno ◽  
Bakkum Douglas ◽  
Ryohei Kanzaki ◽  
...  

2007 ◽  
Vol 52 (6) ◽  
pp. 1350-1354 ◽  
Author(s):  
Aaron M. Tarone ◽  
Kimberley C. Jennings ◽  
David R. Foran

Author(s):  
Eileen E. Parkes ◽  
Kienan I. Savage ◽  
Tong Lioe ◽  
Clinton Boyd ◽  
Sophia Halliday ◽  
...  

Abstract Background The DNA-damage immune-response (DDIR) signature is an immune-driven gene expression signature retrospectively validated as predicting response to anthracycline-based therapy. This feasibility study prospectively evaluates the use of this assay to predict neoadjuvant chemotherapy response in early breast cancer. Methods This feasibility study assessed the integration of a novel biomarker into clinical workflows. Tumour samples were collected from patients receiving standard of care neoadjuvant chemotherapy (FEC + /−taxane and anti-HER2 therapy as appropriate) at baseline, mid- and post-chemotherapy. Baseline DDIR signature scores were correlated with pathological treatment response. RNA sequencing was used to assess chemotherapy/response-related changes in biologically linked gene signatures. Results DDIR signature reports were available within 14 days for 97.8% of 46 patients (13 TNBC, 16 HER2 + ve, 27 ER + HER2-ve). Positive scores predicted response to treatment (odds ratio 4.67 for RCB 0-1 disease (95% CI 1.13–15.09, P = 0.032)). DDIR positivity correlated with immune infiltration and upregulated immune-checkpoint gene expression. Conclusions This study validates the DDIR signature as predictive of response to neoadjuvant chemotherapy which can be integrated into clinical workflows, potentially identifying a subgroup with high sensitivity to anthracycline chemotherapy. Transcriptomic data suggest induction with anthracycline-containing regimens in immune restricted, “cold” tumours may be effective for immune priming. Trial registration Not applicable (non-interventional study). CRUK Internal Database Number 14232.


2019 ◽  
Author(s):  
Corey G. Duke ◽  
Katherine E. Savell ◽  
Robert A. Phillips ◽  
Jeremy J. Day

Blue waveform light is used as an optical actuator in numerous optogenetic technologies employed in neuronal systems. However, the potential side effects of blue waveform light in neurons has not been thoroughly explored, and recent reports suggest that neuronal exposure to blue light can induce transcriptional alterations in vitro and in vivo. Here, we examined the effects of blue waveform light in cultured primary rat cortical neurons. Exposure to blue light (470nm) resulted in upregulation of several immediate early genes (IEGs) traditionally used as markers of neuronal activity, including Fos and Fosb, but did not alter the expression of circadian clock genes Bmal1, Cry1, Cry2, Clock, or Per2. IEG expression was increased following 4 hours of 5% duty cycle light exposure, and IEG induction was not dependent on light pulse width. Elevated levels of blue light exposure induced a loss of cell viability in vitro, suggestive of overt phototoxicity. Changes in gene expression induced by blue waveform light were prevented when neurons were cultured in a photoinert media supplemented with a photostable neuronal supplement instead of commonly utilized neuronal culture media and supplements. Together, these findings suggest that light-induced gene expression alterations observed in vitro stem from a phototoxic interaction between commonly used media and neurons, and offer a solution to prevent this toxicity when using photoactivatable technology in vitro.


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