scholarly journals Molecular identification and mapping of a novel stripe rust resistance gene in wheat resistance line CH5389

2018 ◽  
Vol 48 (5) ◽  
Author(s):  
Haixian Zhan ◽  
Huijuan Guo ◽  
Linyi Qiao ◽  
Liping Mao ◽  
Shuosheng Zhang
Keyword(s):  
Resistance Gene ◽  
Stripe Rust ◽  
Rust Resistance ◽  
Puccinia Striiformis ◽  
Dominant Gene ◽  
Genomic Analysis ◽  
Resistance Breeding ◽  
Genetic Distances ◽  
Stripe Rust Resistance ◽  
Comparative Genomic

ABSTRACT: Stripe rust, caused by Puccinia striiformis is one of the most destructive diseases of wheat worldwide. CH5389 is a wheat-Thinopyrum intermedium derived line conferring stripe rust resistance. Genetic analyses of seedlings of F2 populations and F2:3 families developed by crossing CH5389 and susceptible common wheat revealed that stripe rust resistance in CH5389 was controlled by a single dominant gene that was designated YrCH5389. Eight SSR and EST-PCR polymorphic markers on chromosome 3AL were identified in F2 population of CH5389/Taichung29. The YrCH5389 was flanked by EST marker BE405348 and SSR marker Xwmc388 on chromosome 3AL with genetic distances of 2.2 and 4.6 cM, respectively. Comparative genomic analysis demonstrated that the orthologous genomic region of YrCH5389 covered 990 kb in rice, 640 kb in Brachypodium, and 890 kb in sorghum. Based on the locations of the markers, the resistance gene was located to chromosome deletion bin 3AL-0.85-1.00. Because there are no officially named stripe rust resistance genes on the 3AL chromosome, the YrCH5389 should be designated as a new resistance gene. These linkage markers could be useful for marker-assisted selection in wheat resistance breeding.

Molecular mapping of stripe rust resistance gene YrH922 in a derivative of wheat (Triticum aestivum)–Psathyrostachys huashanica

2019 ◽  
Vol 70 (11) ◽  
pp. 939
Author(s):  
Zhengwu Fang ◽  
Cai Sun ◽  
Tao Lu ◽  
Zhi Xu ◽  
Wendi Huang ◽  
...  
Keyword(s):  
Triticum Aestivum ◽  
Resistance Gene ◽  
Stripe Rust ◽  
Rust Resistance ◽  
Puccinia Striiformis ◽  
Dominant Gene ◽  
Rust Resistance Gene ◽  
Stripe Rust Resistance ◽  
Psathyrostachys Huashanica ◽  
Stripe Rust Resistance Gene

Wheat stripe rust, caused by Puccinia striiformis f. sp. tritici Erikss (Pst), is one of the most damaging diseases in common wheat (Triticum aestivum L.) globally. Breeding for genetic resistance is the most effective, economical and ecologically sustainable method to control the disease. The wheat line H922-9-12, developed from a cross between Psathyrostachys huashanica Keng and T. aestivum, was highly resistant to nine Pst races in tests at the seedling stage. To characterise and map the stripe rust resistance gene(s) in H922-9-12, segregating populations were developed by crossing H922-9-12 with the susceptible cultivar Mingxian 169. When tested with Pst race CYR34, the stripe rust resistance in H922-9-12 was shown to be controlled by a single dominant gene, provisionally designated YrH922. A linkage map was constructed with five simple sequence repeat, six expressed sequence tag (EST) and two sequence-related amplified polymorphism markers. YrH922 was located on chromosome 3BL and was 2.7 and 3.4 cM proximal to EST-STS (sequence-tagged site) markers BE517923 and BE471045, respectively. The flanking marker BE517923 in marker-assisted selection for the gene can be used to improve stripe rust resistance on breeding programs.

scholarly journals Molecular Mapping of the Stripe Rust Resistance Gene Yr69 on Wheat Chromosome 2AS

Plant Disease ◽  
2016 ◽  
Vol 100 (8) ◽  
pp. 1717-1724 ◽  
Author(s):  
Liyuan Hou ◽  
Juqing Jia ◽  
Xiaojun Zhang ◽  
Xin Li ◽  
Zujun Yang ◽  
...  
Keyword(s):  
Resistance Gene ◽  
Stripe Rust ◽  
Rust Resistance ◽  
Expressed Sequence Tag ◽  
Molecular Mapping ◽  
Puccinia Striiformis ◽  
Dominant Gene ◽  
Introgression Line ◽  
Stripe Rust Resistance ◽  
Resistance Specificity

Wheat is one of the major food crops in the world. Stripe rust, caused by Puccinia striiformis f. sp. tritici, is an economically important disease that affects wheat worldwide. The discovery of novel resistance genes and the deployment of effectively resistant cultivars are important for the ongoing control of wheat stripe rust and the maintenance of the agricultural productivity of wheat. CH7086, a new stripe rust-resistant wheat introgression line, was selected by crossing susceptible cultivars with the resistant Thinopyrum ponticum-derived partial amphiploid Xiaoyan 7430. The resistance of CH7086 is effective against all current Chinese P. striiformis f. sp. tritici races. CH7086 was crossed with the stripe rust-susceptible cultivars to develop F1, F2, F3, and BC1 populations for genetic analysis. Segregation in the F2 and BC1 populations and F2:3 lines were tested for resistance against the P. striiformis f. sp. tritici race CYR32. This test showed that CH7086 carries a single dominant gene for stripe rust resistance, which was temporarily designated YrCH86. The closest of the eight simple sequence repeat (SSR) and expressed sequence tag-SSR markers flanking the locus were X2AS33, which is 1.9 cM distal, and Xmag3807, which is 3.1 cM proximal. The resistance gene and its polymorphic markers were placed in deletion bin 2AS-0.78-1.00 using the ‘Chinese Spring’ nullisomic-tetrasomic, ditelosomic, and deletion lines. The tests of both allelism and resistance specificity suggested that the resistance gene found in CH7086 was not Yr17, which was the only current formally named Yr gene on chromosome 2AS. Thus, YrCH86 appeared to be a new locus and was permanently designated Yr69.

scholarly journals Molecular Mapping of a Stripe Rust Resistance Gene in Spring Wheat Cultivar Zak

2009 ◽  
Vol 99 (10) ◽  
pp. 1209-1215 ◽  
Author(s):  
X. X. Sui ◽  
M. N. Wang ◽  
X. M. Chen
Keyword(s):  
Resistance Gene ◽  
Stripe Rust ◽  
Spring Wheat ◽  
Rust Resistance ◽  
Molecular Mapping ◽  
Puccinia Striiformis ◽  
Yellow Rust ◽  
Dominant Gene ◽  
The United States ◽  
Stripe Rust Resistance

Stripe rust (yellow rust), caused by Puccinia striiformis f. sp. tritici, is one of the most devastating foliar diseases of wheat (Triticum aestivum) worldwide. Growing resistant cultivars is the best approach for control of the disease. Although the stripe rust resistance in spring wheat cv. Zak has been circumvented by a group of races of the pathogen predominant in the United States since 2000, the resistance genes in Zak were unknown. To identify and map the genes for resistance to stripe rust, Zak was crossed with susceptible wheat genotype ‘Avocet Susceptible’. Seedlings of the parents and F1, F2, and F3 progeny were tested with P. striiformis f. sp. tritici races PST-43 and PST-45 under controlled greenhouse conditions. Genetic analysis determined that Zak has a single dominant gene, designated as YrZak, conferring race-specific all-stage resistance. Resistance gene analog polymorphism (RGAP), simple sequence repeat (SSR), and sequence-tagged site (STS) techniques were used to identify molecular markers linked to YrZak. A linkage group of three RGAP, three SSR, and three STS markers was constructed for YrZak using 205 F3 lines. Amplification of the complete set of Chinese Spring nulli-tetrasomic lines with RGAP marker Xwgp102 indicated that YrZak is present on chromosome 2B. The three SSR markers further mapped YrZak to the long arm of chromosome 2B. Amplification of chromosome 2B deletion lines with SSR marker Xgwm501 further confirmed that YrZak is on chromosome 2BL. To determine the genetic distance between YrZak and Yr5, which also is present on chromosome 2BL, 300 F2 plants from cross Zak/Yr5 were tested with PST-43. Six susceptible plants were identified from the F2 population, indicating that YrZak and Yr5 are ≈42 centimorgans apart. The results of race reactions and chromosomal locations indicated that YrZak is different from previously identified genes for resistance to stripe rust. This gene should be useful in monitoring virulence changes in the pathogen population and in studying host–pathogen interactions.

scholarly journals Genetic and Molecular Mapping of Stripe Rust Resistance Gene in Wheat–Psathyrostachys huashanica Translocation Line H9020-1-6-8-3

Plant Disease ◽  
2012 ◽  
Vol 96 (10) ◽  
pp. 1482-1487 ◽  
Author(s):  
Qiang Li ◽  
Jing Huang ◽  
Lu Hou ◽  
Pei Liu ◽  
Jinxue Jing ◽  
...  
Keyword(s):  
Resistance Gene ◽  
Stripe Rust ◽  
Rust Resistance ◽  
Puccinia Striiformis ◽  
Durable Resistance ◽  
Rust Resistance Gene ◽  
Stripe Rust Resistance ◽  
Translocation Line ◽  
Psathyrostachys Huashanica ◽  
Stripe Rust Resistance Gene

Stripe rust, caused by Puccinia striiformis f. sp. tritici, is one of the most important diseases of wheat worldwide. The best strategy to control stripe rust is to grow resistant cultivars, but only a few effective genes are available. The wheat accession H9020-1-6-8-3 is a translocation line previously developed from interspecific hybridization between wheat genotype 7182 and Psathyrostachys huashanica, and is resistant to most Chinese Puccinia striiformis f. sp. tritici races. To identify the resistance genes in the translocation line, H9020-1-6-8-3 was crossed with susceptible genotype Mingxian 169, and seedlings of parents and F1, F2, and F3 progenies were tested with prevalent Chinese P. striiformis f. sp. tritici races CYR32 and CYR33 under controlled greenhouse conditions. The genetic results indicated that two single dominant genes in H9020-1-6-8-3 confer resistance to CYR32 and CYR33, respectively. The gene for resistance to CYR33 was temporarily designated as YrH9020. Six simple-sequence repeat markers were used to map the resistance gene to the short arm of wheat chromosome 2D, using 329 F2 plants tested with CYR33 in the greenhouse. The genetic distances of the two closest flanking markers, Xgwm261 and Xgwm455, were 4.4 and 5.8 centimorgans, respectively. Disease assessments and polymorphic tests of the flanking markers among the Psathyrostachys huashanica line and wheat lines 7182, H9020-1-6-8-3, and Mingxian169 suggested that the resistance gene YrH9020 in H9020-1-6-8-3 was originally from P. huashanica. The exotic stripe rust resistance gene and linked molecular markers should be useful for pyramiding with other genes to develop wheat cultivars with high-level and durable resistance to stripe rust.

scholarly journals Genome-wide Mapping for Stripe Rust Resistance Loci in Common Wheat Cultivar Qinnong 142

Plant Disease ◽  
2019 ◽  
Vol 103 (3) ◽  
pp. 439-447 ◽  
Author(s):  
Qingdong Zeng ◽  
Jianhui Wu ◽  
Shengjie Liu ◽  
Xianming Chen ◽  
Fengping Yuan ◽  
...  
Keyword(s):  
Resistance Gene ◽  
Stripe Rust ◽  
Rust Resistance ◽  
Puccinia Striiformis ◽  
Wheat Cultivar ◽  
Infection Type ◽  
Snp Markers ◽  
Stripe Rust Resistance ◽  
Adult Plant ◽  
Wheat Cultivars

Stripe rust caused by Puccinia striiformis f. sp. tritici threatens worldwide wheat production. Growing resistant cultivars is the best way to control this disease. Chinese wheat cultivar Qinnong 142 (QN142) has a high level of adult-plant resistance to stripe rust. To identify quantitative trait loci (QTLs) related to stripe rust resistance, we developed a recombinant inbred line (RIL) population from a cross between QN142 and susceptible cultivar Avocet S. The parents and 165 F6 RILs were evaluated in terms of their stripe rust infection type and disease severity in replicated field tests with six site-year environments. The parents and RILs were genotyped with single-nucleotide polymorphism (SNP) markers. Four stable QTLs were identified in QN142 and mapped to chromosome arms 1BL, 2AL, 2BL, and 6BS. The 1BL QTL was probably the known resistance gene Yr29, the 2BL QTL was in a resistance gene-rich region, and the 2AL and 6BS QTLs might be new. Kompetitive allele specific polymerase chain reaction markers developed from the SNP markers flanking these QTLs were highly polymorphic in a panel of 150 wheat cultivars and breeding lines. These markers could be used in marker-assisted selection for incorporating the stripe rust resistance QTL into new wheat cultivars.

Genetics of stripe rust resistance in 'Karamu' wheat (Triticum aestivum L.)

2005 ◽  
Vol 56 (6) ◽  
pp. 619 ◽  
Author(s):  
M. Imtiaz ◽  
M. G. Cromey ◽  
J. G. Hampton ◽  
F. C. Ogbonnaya
Keyword(s):  
Resistance Gene ◽  
Stripe Rust ◽  
Rust Resistance ◽  
Adult Plant Resistance ◽  
Puccinia Striiformis ◽  
Triticum Aestivum L ◽  
Stripe Rust Resistance ◽  
Adult Plant ◽  
Dh Lines ◽  
Disease Pressure

The New Zealand wheat (Triticum aestivum L.) cv. Karamu (same parentage as the US cv. Anza) was originally believed to carry gene Yr18, which provides adult plant resistance to stripe rust (Puccinia striiformis f. sp. tritici), in addition to the seedling resistance gene YrA. Following the detection of virulence to the stripe rust resistance gene YrA in 1995, much of the resistance of Karamu was eroded and the cultivar suffered from occasional severe stripe rust outbreaks. This meant that either one or more new races of Puccinia striiformis f. sp. tritici with virulence to Yr18 had developed, or that Yr18 conferred inadequate resistance under high disease pressure. Karamu was crossed with cv. Otane, which carries Yr18, and 140 double haploid (DH) lines obtained from the F1 progeny were evaluated for seedling and adult plant resistance under greenhouse and field conditions. Evaluation of F1 plants against stripe rust pathotype 106E139A+ revealed that the resistance was recessive and that none of the resistance genes present was effective at the seedling stage. Segregation in the DH lines at the adult plant stage indicated that the resistance measured through infection type in both the greenhouse and the field was based on 3 genes, 1 from Karamu and 2 from Otane. However, the resistance gene from Karamu did not contribute towards resistance measured through final disease severity, but acted additively with genes from Otane in providing slow-rusting resistance as expressed by lower values for area under the disease progress curve. It was concluded that Karamu does not have gene Yr18, but rather possesses a recessive minor gene, which explains its adult plant susceptibility under high disease pressure. However, this Karamu gene did interact with Otane resistance genes to provide increased resistance.

Genetics of stripe rust resistance in two barley (Hordeum vulgare L.) genotypes

2019 ◽  
Vol 79 (02) ◽  
Author(s):  
Vishnu Kumar ◽  
S. C. Bhardwaj ◽  
A. S. Kharub ◽  
G. P. Singh
Keyword(s):  
Stripe Rust ◽  
Rust Resistance ◽  
Puccinia Striiformis ◽  
Dominant Gene ◽  
Malting Quality ◽  
Stripe Rust Resistance ◽  
Yield Reduction ◽  
Adult Plant ◽  
Hordeum Vulgare L ◽  
F2 Population

Stripe rust inflicted by the pathogen Puccinia striiformis Westend. f. sp. hordei Eriks can cause marked grain yield reduction and deterioration of the malting quality in barley. Two barley genotypes, DWRB137 (DWR28/DWRUB64) and DWRB143 (DWRB73/DWR83) were identified as resistant (R) for three stripe rust races viz., 57 (0S0), M (1S0) and Q (5S0) at seedling and adult plant stages. These genotypes were crossed with two stripe rust susceptible (S) barley cultivars, RD2035 and Lakhan to study mode of inheritance of stripe rust resistance. All the F1 plants showed resistance against stripe rust race, 57 (0S0) indicating that the resistance (R) is dominant. The F2 generations derived from the crosses namely, Lakhan/DWRB137, Lakhan/DWRB143, RD2035/DWRB137 and RD2035/DWRB143 were tested with inoculum of race, 57 (0S0) under artificially inoculated conditions. The observed frequency of segregants in each F2 generation fit well in a theoretical ratio of 3(R):1(S) (χ 2(T) less than 0.01) indicating that the resistance against the tested race is controlled by a single dominant gene in the genotypes, DWRB137 and DWRB143. To validate the F2 hypothesis, the F3 progenies were also tested under above described conditions and followed discrete segregation of 1 (R): 2 (Segregating): 1(S) ratio in all the four crosses. Test of allelism was also conducted to establish the identity of resistance gene(s) present in the resistant genotypes. The F2 population derived from DWRB137/DWRB143 (R × R) cross fit to 15(R):1(S) ratio showing that the two genotypes had different resistance genes.

scholarly journals Genetic Relationship of Stripe Rust Resistance Genes Yr34 and Yr48 in Wheat and Identification of Linked KASP Markers

Plant Disease ◽  
2018 ◽  
Vol 102 (2) ◽  
pp. 413-420 ◽  
Author(s):  
N. Qureshi ◽  
H. S. Bariana ◽  
P. Zhang ◽  
R. McIntosh ◽  
U. K. Bansal ◽  
...  
Keyword(s):  
Resistance Gene ◽  
Stripe Rust ◽  
Rust Resistance ◽  
Puccinia Striiformis ◽  
Rust Resistance Gene ◽  
Stripe Rust Resistance ◽  
Adult Plant ◽  
Wheat Genotypes ◽  
Stripe Rust Resistance Gene ◽  
Australian Continent

The Australian continent was free from wheat stripe rust caused by Puccinia striiformis f. sp. tritici until exotic incursions occurred in 1979 and 2002. The 2002 incursion enabled the identification of a new stripe rust resistance gene (Yr34) in the advanced breeding line WAWHT2046. In this study, we developed and validated markers closely linked with Yr34, which is located in the distal region in the long arm of chromosome 5A. Four kompetitive allele-specific polymerase chain reaction (KASP) and three sequence-tagged site (STS) markers derived from the International Wheat Genome Sequencing Consortium RefSeq v1.0 scaffold-77836 cosegregated with Yr34. Markers sun711, sun712, sun725, sunKASP_109, and sunKASP_112 were shown to be suitable for marker-assisted selection in a validation panel of 71 Australian spring wheat genotypes, with the exception of cultivar Orion that carried the Yr34-linked alleles for sunKASP_109 and sunKASP_112. Markers previously reported to be linked with adult plant stripe rust resistance gene Yr48 also cosegregated with Yr34. Wheat genotypes carrying Yr34 and Yr48 produced identical haplotypes for the Yr34-linked markers identified in this study and those previously reported to be linked with Yr48. Phenotypic testing of genotypes carrying Yr34 and Yr48 showed that both genes conferred similar seedling responses to pre-2002 and post-2002 P. striiformis f. sp. tritici pathotypes. Further testing of 600 F2 plants from a cross between WAWHT2046 and RIL143 (Yr48) with P. striiformis f. sp. tritici pathotype 134 E16A+Yr17+Yr27+ failed to reveal any susceptible segregants. Our results strongly suggest that Yr34 and Yr48 are the same gene, and that Yr48 should be considered a synonym of Yr34.

Identification of wheat-Thinopyrum intermedium alien disomic addition lines conferring resistance to stripe rust

2009 ◽  
Vol 89 (3) ◽  
pp. 569-574 ◽  
Author(s):  
F. Lin ◽  
Q. Sun ◽  
S. Xu ◽  
X. Chen ◽  
L. Zhang ◽  
...  
Keyword(s):  
Chromosome Number ◽  
Stripe Rust ◽  
Rust Resistance ◽  
Puccinia Striiformis ◽  
Dominant Gene ◽  
Stripe Rust Resistance ◽  
Root Tip ◽  
Addition Lines ◽  
Thinopyrum Intermedium ◽  
Disomic Addition Lines

Thinopyrum intermedium carries many useful traits for wheat genetic improvement. To identify genes conferring resistance to stripe rust caused by Puccinia striiformis f. sp. tritici in Zhong4, one of the Zhong series of partial amphiploids from the hybrids of common wheat × Th. intermedium, a cross was made between Zhong4 and a Chinese Spring ph1b mutant (CS-ph1b). The parents, F1, F2 plants and F5 lines of the cross were tested with Chinese predominant race CYR31 of P. striiformis f. sp. tritici in the seedling stage under controlled greenhouse conditions. Of 201 F2 seedlings tested with race CYR31, 149 were resistant and 52 were susceptible. The segregation fit a 3 resistant:1 susceptible ratio, indicating that a single dominant gene conferred resistance to the race CYR31. This result was further confirmed by the segregation of F5 lines into 1:1 ratio (P = 0.77). Using the Schiff dyeing method, the chromosome number in the root-tip cells of 10 F5 resistant lines (total 42 plants) was determined. Two alien addition lines (5-1-2-1-1-5, 5-1-2-1-1-6) with the smallest chromosome number (2n = 42 + II) were identified. A total of 105 pollen mother cells were examined at metaphase 1 (PMCs MI) for meiotic chromosome pairing. The lines 5-1-2-1-1-5 and 5-1-2-1-1-6 showed regular meiosis, exhibiting 22 ring or rod bivalents (2n = 22 II). The GISH results indicated that lines 5-1-2-1-1-5 and 5-1-2-1-1-6 were wheat-Th. intermedium alien disomic addition lines with 21 pairs of wheat chromosomes and one pair of Th. intermedium chromosomes. These two lines were all resistant to stripe rust, suggesting that they can be used as donors of stripe rust resistance genes and have great potential to play important roles in wheat stripe rust resistance breeding programs in China and the world.Key words: Wheat-Thinopyrum intermedium, stripe rust, GISH, cytological identification

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