New and Previously Overlooked Records of Several Fish Species from the Marine Waters of New York

2016 ◽  
Vol 23 (1) ◽  
pp. 118-133
Author(s):  
Jeremy J. Wright ◽  
Robert E Schmidt ◽  
Bryan R. Weatherwax
Keyword(s):  
New York ◽  
2002 ◽  
Vol 9 (1) ◽  
pp. 47
Author(s):  
Philip T. Briggs ◽  
John R. Waldman

2018 ◽  
Vol 25 (1) ◽  
pp. N1-N3
Author(s):  
Robert E. Schmidt ◽  
Jeremy J. Wright

2018 ◽  
Author(s):  
Mark Y. Stoeckle ◽  
Mithun Das Mishu ◽  
Zachary Charlop-Powers

AbstractHere we describe GoFish, a streamlined environmental DNA (eDNA) presence/absence assay. The assay amplifies a 12S segment with broad-range vertebrate primers, followed by nested PCR with M13-tailed, species-specific primers. Sanger sequencing confirms positives detected by gel electrophoresis. We first obtained 12S sequences from 77 fish specimens representing 36 northwestern Atlantic taxa not well documented in GenBank. Using the newly obtained and published 12S records, we designed GoFish assays for 11 bony fish species common in the lower Hudson River estuary and tested seasonal abundance and habitat preference at two sites. Additional assays detected nine cartilaginous fish species and a marine mammal, bottlenose dolphin, in southern New York Bight. GoFish sensitivity was equivalent to Illumina MiSeq metabarcoding. Unlike quantitative PCR (qPCR), GoFish does not require tissues of target and related species for assay development and a basic thermal cycler is sufficient. Unlike Illumina metabarcoding, indexing and batching samples are unnecessary and advanced bioinformatics expertise is not needed. The assay can be carried out from water collection to result in three days. The main limitations so far are species with shared target sequences and inconsistent amplification of rarer eDNAs. We think this approach will be a useful addition to current eDNA methods when analyzing presence/absence of known species, when turnaround time is important, and in educational settings.


2016 ◽  
Vol 67 (8) ◽  
pp. 1128 ◽  
Author(s):  
Lauren J. Veale ◽  
Peter G. Coulson ◽  
Norman G. Hall ◽  
Ian C. Potter

The biological characteristics of a marine and macrophyte-associated species (Pelates octolineatus) in a large microtidal, eutrophic estuary in 2008–10 were determined. Comparisons are made with those of individuals remaining in coastal waters and during two earlier periods in the estuary when plant biomass differed markedly. P. octolineatus start entering the Peel–Harvey Estuary in mid-summer, soon after metamorphosis, with many remaining there until autumn when they are ~15 months old. These individuals, and older fish that re-entered the estuary in summer, then return to the sea where they spawn from late spring to early summer. Most P. octolineatus in the estuary were less than or equal to the length at maturity and all were <4 years old, whereas individuals up to 10 years old were caught in coastal embayments, emphasising that the estuary acts mainly as a nursery for this terapontid. Growth in the estuary was seasonal and peaked earlier and was greater than in marine waters. Abundance of P. octolineatus in the estuary was greater in 2008–10 and 1980–81 than in 1996–97, when macrophytes were less abundant. The results demonstrate how a marine estuarine-opportunist can benefit from using both estuaries and coastal waters as a nursery area and capitalise on variations in environmental conditions.


2018 ◽  
Vol 114 ◽  
pp. 219-230 ◽  
Author(s):  
A.R. Fernandes ◽  
D. Mortimer ◽  
M. Holmes ◽  
M. Rose ◽  
L. Zhihua ◽  
...  

Geo&Bio ◽  
2021 ◽  
Vol 2021 (20) ◽  
pp. 79-101
Author(s):  
Leonid Manilo ◽  

The paper is devoted to alien fish species that have appeared in coastal waters of the Black Sea near Crimea for the past 50 years. The fish fauna of the Black Sea mainly comprises species that represent the Ponto-Caspian and Atlantic-Mediterranean faunal complexes. According to the generalised literature data, 158 fish species of 107 genera of 60 families have been recorded in the Black Sea since the publication of K. F. Kessler’s work (Kessler 1877), all of them representing the Atlantic-Mediterranean complex. In waters of Crimea, 116 species of 86 genera of 51 families have been recorded for the same period. A full checklist of fishes of this complex is presented indicating 31 alien species that have appeared since the 1970s and which belong to 27 genera and 16 families. In waters of Crimea, alien fishes make up 26.5 % of all species, 31.0 % of all genera, and 31.4 % of all families of the Atlantic-Medirranean complex. According to the level of their occurrence in marine waters of Crimea, all recently introduced species are grouped into three categories: regular, sporadic, and casual. Their brief characterisics are given, including synonymy, representation in the fish collection of the NMNH NASU, brief description, distribution, and vector of introduction. It was found that benthic species predominate among introduced fishes that occur regularly in waters of Crimea (12 species, or 80.0 %), while bentho-pelagic and pelagic species are less represented (6.7 % and 13.3 %, respectively). Pelagic and bentho-pelagic species prevail (50.0 % and 37.5 %, respectively) among fishes that occur sporadically. Bentho-pelagic species predominate (57.1 %) among fishes that occur casually. It was discovered that among the 31 alien fishes recorded in the Black Sea waters of Crimea for the past 50 years predominate those that have appeared here due to the natural process of mediterranisation (22 species, 71.0 %). It was imposibble to determine the vector of introduction of 4 species (12.9 %). The appearance of 5 species, which represent 16.1 % of all alien species, is related to anthropogenic factors. It can be also concluded that benthic species predominate among the alien fishes (14 species, or 45.2 %), while bentho-pelagic (9 species) and pelagic (8 species) fishes make up 29.0 % and 25.8 %, respectively. Of the 31 introduced fishes, 10 (32.2 %) have naturalised and acclimatised in marine waters of Crimea and have founded independent breeding populations. Among them, representatives of the family Gobiidae notably prevail, followed by the taxonomically close family Oxudercidae, whereas one species belongs to the family Blenniidae. The so-iuy mullet, which is the only representative of the pelagic ecological group, was introduced intentionally.


Sign in / Sign up

Export Citation Format

Share Document