scholarly journals DNA Methylation in Rehmannia glutinosa Roots Suffering from Replanting Disease

2015 ◽  
Vol 18 (01) ◽  
pp. 160-167 ◽  
Author(s):  
Yanhui Yang ◽  
Mingjie Li
Plants ◽  
2020 ◽  
Vol 9 (5) ◽  
pp. 567 ◽  
Author(s):  
Yanhui Yang ◽  
Zhongyi Zhang ◽  
Ruifang Li ◽  
Yanjie Yi ◽  
Heng Yang ◽  
...  

Rehmannia glutinosa production is affected by replanting disease, in which autotoxic harm to plants is mediated by endogenous phenolic acids as allelopathic compounds found in root exudates. These phenolic acids are mostly phenylpropanoid products of plants’ secondary metabolisms. The molecular mechanism of their biosynthesis and release has not been explored in R. glutinosa. P-coumarate-3-hydroxylase (C3H) is the second hydroxylase gene involved in the phenolic acid/phenylpropanoid biosynthesis pathways. C3Hs have been functionally characterized in several plants. However, limited information is available on the C3H gene in R. glutinosa. Here, we identified a putative RgC3H gene and predicted its potential function by in silico analysis and subcellular localization. Overexpression or repression of RgC3H in the transgenic R. glutinosa roots indicated that the gene was involved in allelopathic phenolic biosynthesis. Moreover, we found that these phenolic acid release amount of the transgenic R. glutinosa roots were altered, implying that RgC3H positively promotes their release via the molecular networks of the activated phenolic acid/phenylpropanoid pathways. This study revealed that RgC3H plays roles in the biosynthesis and release of allelopathic phenolic acids in R. glutinosa roots, laying a basis for further clarifying the molecular mechanism of the replanting disease development.


2014 ◽  
Vol 42 (5) ◽  
pp. 881-892 ◽  
Author(s):  
Yan Hui Yang ◽  
Ming Jie Li ◽  
Xin Yu Li ◽  
Xin Jian Chen ◽  
Wen Xiong Lin ◽  
...  

2021 ◽  
Vol 26 (02) ◽  
pp. 337-348
Author(s):  
Fajie Feng

The perennial herbaceous plant, Rehmannia glutinosa Libosch, is one of traditional Chinese medicines with a long history of cultivation and medicinal use. However, in production of R. glutinosa, replanting disease severely affected its yield and medicinal quality. Replanting disease is the special stress including biotic and abiotic factors. The membrane proteins system plays the important role in process of plants responding to stress factors. In this study, the differentially expressed root tissue membrane proteins between first planted and replanted R. glutinosa were identified through the isobaric tag for relative and absolute quantitation (iTRAQ). As a result, the membrane protein extraction kit could highly effectively extract the membrane proteins from R. glutinosa root tissue. A total of 698 differential membrane proteins between first planted and replanted R. glutinosa were obtained. Functional analysis revealed that the differential membrane proteins were involved in various metabolic pathways, including transport and breakdown, signal transduction, membrane trafficking and environmental response. Two important molecular events that occurred in cellular membrane of replanted R. glutinosa including the imbalance of ROS (Reactive Oxygen Species) metabolism and immune response were identified in this study. When replanted R. glutinosa plants faced the complex environment factors in rhizosphere, the proteins located in cellular membrane were often first activated to response to stress stimulus, resulted in the upregulated expression of a large number of LRR-RLKs (Leucine-rich repeat receptor-like kinases) receptor proteins. Meanwhile, the Ca2+ signal proteins and related receptor proteins transmitted and responded to the replanting stress, which induced severe oxidative stress response in the cell membrane of R. glutinosa, membrane peroxidation, intracellular signal disorder, and eventually produce replanting disease. Our findings provided the theoretical and data foundation for elucidating the key mechanisms associated with replanting stress. © 2021 Friends Science Publishers


2014 ◽  
Vol 34 (3) ◽  
pp. 905-915 ◽  
Author(s):  
Yan Hui Yang ◽  
Ming Jie Li ◽  
Xin Jian Chen ◽  
Peng Fei Wang ◽  
Feng Qing Wang ◽  
...  

2021 ◽  
Vol 257 ◽  
pp. 153339
Author(s):  
Yan Hui Yang ◽  
Chao Jie Wang ◽  
Rui Fang Li ◽  
Zhong Yi Zhang ◽  
Heng Yang ◽  
...  

2019 ◽  
Vol 63 (6) ◽  
pp. 757-771 ◽  
Author(s):  
Claire Francastel ◽  
Frédérique Magdinier

Abstract Despite the tremendous progress made in recent years in assembling the human genome, tandemly repeated DNA elements remain poorly characterized. These sequences account for the vast majority of methylated sites in the human genome and their methylated state is necessary for this repetitive DNA to function properly and to maintain genome integrity. Furthermore, recent advances highlight the emerging role of these sequences in regulating the functions of the human genome and its variability during evolution, among individuals, or in disease susceptibility. In addition, a number of inherited rare diseases are directly linked to the alteration of some of these repetitive DNA sequences, either through changes in the organization or size of the tandem repeat arrays or through mutations in genes encoding chromatin modifiers involved in the epigenetic regulation of these elements. Although largely overlooked so far in the functional annotation of the human genome, satellite elements play key roles in its architectural and topological organization. This includes functions as boundary elements delimitating functional domains or assembly of repressive nuclear compartments, with local or distal impact on gene expression. Thus, the consideration of satellite repeats organization and their associated epigenetic landmarks, including DNA methylation (DNAme), will become unavoidable in the near future to fully decipher human phenotypes and associated diseases.


2020 ◽  
Vol 158 (3) ◽  
pp. S50-S51
Author(s):  
Suresh Venkateswaran ◽  
Varun Kilaru ◽  
Hari Somineni ◽  
Jason Matthews ◽  
Jeffrey Hyams ◽  
...  

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