Population Structure and Breeding Patterns of 145 U.S. Rice Cultivars Based on SSR Marker Analysis

Crop Science ◽  
2005 ◽  
Vol 45 (1) ◽  
pp. cropsci2005.0066 ◽  
Author(s):  
Hong Lu ◽  
Marc A. Redus ◽  
Jason R. Coburn ◽  
J. Neil Rutger ◽  
Susan R. McCouch ◽  
...  
Keyword(s):  
Population Structure ◽  
Ssr Marker ◽  
Rice Cultivars ◽  
Marker Analysis

Discovery and Utilization of EST-SSR Marker Resource for Genetic Diversity and Population Structure Analyses of a Subtropical Bamboo, Dendrocalamus hamiltonii

2019 ◽  
Vol 57 (5) ◽  
pp. 652-672 ◽  
Author(s):  
Abhishek Bhandawat ◽  
Vikas Sharma ◽  
Pradeep Singh ◽  
Romit Seth ◽  
Akshay Nag ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Population Structure ◽  
Ssr Marker ◽  
Dendrocalamus Hamiltonii

Genetic diversity and structure among Iranian tall fescue populations based on genomic-SSR and EST-SSR marker analysis

2009 ◽  
Vol 282 (1-2) ◽  
pp. 57-70 ◽  
Author(s):  
Majid Sharifi Tehrani ◽  
Mohsen Mardi ◽  
Jamal Sahebi ◽  
Pilar Catalán ◽  
Antonio Díaz-Pérez
Keyword(s):  
Genetic Diversity ◽  
Tall Fescue ◽  
Ssr Marker ◽  
Marker Analysis ◽  
Genetic Diversity And Structure ◽  
Genomic Ssr

SSR marker analysis of cultivated and wild sweet cherry genotypes from the Carpathian Basin

2017 ◽  
pp. 145-150
Author(s):  
Zs. Békefi ◽  
M. Papp ◽  
G. Simon ◽  
B. Timon
Keyword(s):  
Ssr Marker ◽  
Sweet Cherry ◽  
Carpathian Basin ◽  
Marker Analysis

The origin and dissemination of the cultivated almond as determined by nuclear and chloroplast SSR marker analysis

2010 ◽  
Vol 125 (4) ◽  
pp. 593-601 ◽  
Author(s):  
M. Zeinalabedini ◽  
M. Khayam-Nekoui ◽  
V. Grigorian ◽  
T.M. Gradziel ◽  
P. Martínez-Gómez
Keyword(s):  
Ssr Marker ◽  
Marker Analysis ◽  
Chloroplast Ssr

AFLP and SSR marker analysis of grape rootstocks in Indian grape germplasm

2007 ◽  
Vol 112 (2) ◽  
pp. 176-183 ◽  
Author(s):  
Anuradha Upadhyay ◽  
Mamtha D. Saboji ◽  
Suvarna Reddy ◽  
Kiran Deokar ◽  
G.S. Karibasappa
Keyword(s):  
Ssr Marker ◽  
Marker Analysis

Genetic diversity and structure of the zombi pea (Vigna vexillata (L.) A. Rich) gene pool based on SSR marker analysis

Genetica ◽  
2017 ◽  
Vol 145 (2) ◽  
pp. 189-200 ◽  
Author(s):  
Sujinna Dachapak ◽  
Prakit Somta ◽  
Supalak Poonchaivilaisak ◽  
Tarika Yimram ◽  
Peerasak Srinives
Keyword(s):  
Genetic Diversity ◽  
Gene Pool ◽  
Ssr Marker ◽  
Vigna Vexillata ◽  
Marker Analysis ◽  
Genetic Diversity And Structure

scholarly journals Indigenous rice of Northeast India harbor rich genetic diversity as measured by SSR markers and Zn/Fe content

2019 ◽  
Author(s):  
Vanlalsanga No Surname ◽  
Sagolshem Priyokumar Singh ◽  
Yengkhom Tunginba Singh
Keyword(s):  
Genetic Diversity ◽  
Population Structure ◽  
Microsatellite Markers ◽  
Oryza Sativa L ◽  
Northeast India ◽  
Rice Cultivars ◽  
High Genetic Diversity ◽  
Fe Content ◽  
Ne India ◽  
Improvement Programs

Abstract Background Rice (Oryza sativa L.) is one of the most important crops of the world and a major staple food for half of the World’s human population. The Northeastern (NE) region of India lies in the Indo-Burma biodiversity hotspot and about 45% of the total flora of the country is found in the region. Local rice cultivars from different states of NE India were analyzed for genetic diversity and population structure using microsatellite markers, and their zinc and iron content. Results A total of 149 bands were detected using twenty-two microsatellite markers comprising both random and trait-linked markers, showing 100% polymorphism and high value of expected heterozygosity (0.6311) and the polymorphism information content (0.5895). Nali Dhan cultivar of Arunachal Pradesh possessed the highest genetic diversity (0.3545) among studied populations while Moirangphou Khonganbi of Manipur exhibited the lowest genetic diversity (0.0343). The model-based population structure revealed that all the studied 65 rice cultivars were grouped into two clusters. Cluster I was represented by 36 cultivars and cluster II by 29 cultivars. Badalsali cultivar of Assam possessed the highest Zn content (75.8 μg/g) and Kapongla from Manipur possessed the lowest (17.98 μg/g). The highest and the lowest Fe content was found in Fazu (215.62 μg/g) and Idaw (11.42 μg/g) of Mizoram. Conclusion The result suggested rice cultivars of NE India possessing high genetic diversity (Nali Dhan), high Zn (Badalsali) and Fe (Fazu) content can be useful as a source of germplasm for future rice improvement programs.

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