Visual Pigments and Photoreceptors

Author(s):  
Thomas W. Cronin ◽  
Sönke Johnsen ◽  
N. Justin Marshall ◽  
Eric J. Warrant

This chapter focuses on visual pigments and photoreceptors. In living things, photoreception inevitably begins with a photochemical event—a molecule intercepts a photon of light and is somehow changed. Various molecules, generally known as photopigments, perform this function in animals and plants. The molecules involved in vision are called visual pigments. In all animals, vision ultimately depends on a single family of proteins that all have descended from one common ancestor—these are the opsins. The chapter cites the hydrothermal vent crab as a good example of how changes of visual pigments appearing in various developmental states reflect ecological adaptation. The animal's life stages require visual systems sampling opposite ends of the visual spectrum.

1968 ◽  
Vol 51 (2) ◽  
pp. 125-156 ◽  
Author(s):  
George Wald

Extraction of two visual pigments from crayfish eyes prompted an electrophysiological examination of the role of visual pigments in the compound eyes of six arthropods. The intact animals were used; in crayfishes isolated eyestalks also. Thresholds were measured in terms of the absolute or relative numbers of photons per flash at various wavelengths needed to evoke a constant amplitude of electroretinogram, usually 50 µv. Two species of crayfish, as well as the green crab, possess blue- and red-sensitive receptors apparently arranged for color discrimination. In the northern crayfish, Orconectes virilis, the spectral sensitivity of the dark-adapted eye is maximal at about 550 mµ, and on adaptation to bright red or blue lights breaks into two functions with λmax respectively at about 435 and 565 mµ, apparently emanating from different receptors. The swamp crayfish, Procambarus clarkii, displays a maximum sensitivity when dark-adapted at about 570 mµ, that breaks on color adaptation into blue- and red-sensitive functions with λmax about 450 and 575 mµ, again involving different receptors. Similarly the green crab, Carcinides maenas, presents a dark-adapted sensitivity maximal at about 510 mµ that divides on color adaptation into sensitivity curves maximal near 425 and 565 mµ. Each of these organisms thus possesses an apparatus adequate for at least two-color vision, resembling that of human green-blinds (deuteranopes). The visual pigments of the red-sensitive systems have been extracted from the crayfish eyes. The horse-shoe crab, Limulus, and the lobster each possesses a single visual system, with λmax respectively at 520 and 525 mµ. Each of these is invariant with color adaptation. In each case the visual pigment had already been identified in extracts. The spider crab, Libinia emarginata, presents another variation. It possesses two visual systems apparently differentiated, not for color discrimination but for use in dim and bright light, like vertebrate rods and cones. The spectral sensitivity of the dark-adapted eye is maximal at about 490 mµ and on light adaptation, whether to blue, red, or white light, is displaced toward shorter wavelengths in what is essentially a reverse Purkinje shift. In all these animals dark adaptation appears to involve two phases: a rapid, hyperbolic fall of log threshold associated probably with visual pigment regeneration, followed by a slow, almost linear fall of log threshold that may be associated with pigment migration.


1993 ◽  
Vol 10 (4) ◽  
pp. 711-715 ◽  
Author(s):  
Ferenc I. Hárosi ◽  
Jochen Kleinschmidt

AbstractWe present microspectrophotometric evidence for the existence of two distinct visual pigments residing in two different morphological types of photoreceptor of the sea lamprey. In the upstream migrant Petromyzon marinus, the pigment found in short receptors has a wavelength of peak absorbance (λmax) of 525 nm, whereas the pigment located in long receptors has a λmax of 600 nm. Although the former appears to be pure porphyropsin, the latter is akin to visual pigments found in the red-absorbing cones of amphibian and teleost retinae. The kinship is more than superficial pertaining to λmax of the a–band absorbance to its native maximum value. The presence of an anion-sensitive and an anion-insensitive pigment in a retina implies the expression of two distinct opsin genes. We infer this from several examples of correlation between anion sensitivity and opsin sequence groupings. Moreover, the presence of two distinct opsin genes expressed throughout six vertebrate classes implies their existence in a common ancestor to all.


Author(s):  
M. L. Miroshnichenko ◽  
S. L'Haridon ◽  
P. Schumann ◽  
S. Spring ◽  
E. A. Bonch-Osmolovskaya ◽  
...  

A novel moderately thermophilic, microaerobic to anaerobic, chemolithoautotrophic bacterium, designated strain CRT, was isolated from a deep-sea hydrothermal vent site at 36°N on the Mid-Atlantic Ridge. Cells were Gram-negative, non-motile rods. The organism grew at 45–65 °C and pH 6·5–7·4, with optimum growth at 55 °C and pH 6·9–7·1. The NaCl range for growth was 5–50 g l−1 (optimum 30 g l−1). Strain CRT was an obligate chemolithoautotroph, growing with H2 as energy source, sulfur, nitrate or oxygen as electron acceptors and CO2 as carbon source. Hydrogen sulfide and ammonium were the respective products of sulfur and nitrate reduction. The G+C content of the genomic DNA was 32·1 mol%. Based on 16S rRNA gene sequence analysis, this organism was most closely related to Caminibacter hydrogeniphilus (94·9 % similarity). On the basis of phenotypic and phylogenetic data, it is proposed that the isolate represents a novel species, Caminibacter profundus sp. nov. The type strain is CRT (=DSM 15016T=JCM 11957T). The phylogenetic data also correlate well with the significant phenotypic differences between the lineage encompassing the genera Nautilia and Caminibacter and other members of the class ‘Epsilonproteobacteria’. The lineage encompassing the genera Nautilia and Caminibacter is therefore proposed as a new order, Nautiliales ord. nov., represented by a single family, Nautiliaceae fam. nov.


2018 ◽  
Author(s):  
Kazuko Hase ◽  
Masato S. Abe ◽  
Masakazu Shimada

AbstractFrom microorganism to vertebrates, living things often exhibit social aggregation. One of anuran larvae, dark-bodied toad tadpoles (genus Bufo) are known to aggregate against predators. When individuals share genes from a common ancestor for whom social aggregation was a functional trait, they are also likely to share common recognition cues regarding association preferences, while greater genetic distances make cohesive aggregation difficult. In this study, we conducted quantitative analyses to examine aggregation behavior among three lineages of toad tadpoles: Bufo japonicus japonicus, B. japonicus formosus, and B. gargarizans miyakonis. To determine whether there is a correlation between cohesiveness and genetic similarity among group members, we conducted an aggregation test using 42 cohorts consisting of combinations drawn from a laboratory-reared set belonging to distinct clutches. As genetic indices, we used mitochondrial DNA (mtDNA) and major histocompatibility complex (MHC) class II alleles. The results clearly indicated that aggregation behavior in toad tadpoles is directly influenced by genetic distances based on mtDNA sequences and not on MHC haplotypes. Cohesiveness among heterogeneous tadpoles is negatively correlated with the geographic dispersal of groups. Our findings suggest that social incompatibility among toad tadpoles reflects phylogenetic relationships.


2020 ◽  
Vol 117 (16) ◽  
pp. 8948-8957 ◽  
Author(s):  
Megan L. Porter ◽  
Hiroko Awata ◽  
Michael J. Bok ◽  
Thomas W. Cronin

Stomatopod crustaceans possess some of the most complex animal visual systems, including at least 16 spectrally distinct types of photoreceptive units (e.g., assemblages of photoreceptor cells). Here we fully characterize the set of opsin genes expressed in retinal tissues and determine expression patterns of each in the stomatopod Neogonodactylus oerstedii. Using a combination of transcriptome and RACE sequencing, we identified 33 opsin transcripts expressed in each N. oerstedii eye, which are predicted to form 20 long-wavelength–sensitive, 10 middle-wavelength–sensitive, and three UV-sensitive visual pigments. Observed expression patterns of these 33 transcripts were highly unusual in five respects: 1) All long-wavelength and short/middle-wavelength photoreceptive units expressed multiple opsins, while UV photoreceptor cells expressed single opsins; 2) most of the long-wavelength photoreceptive units expressed at least one middle-wavelength–sensitive opsin transcript; 3) the photoreceptors involved in spatial, motion, and polarization vision expressed more transcripts than those involved in color vision; 4) there is a unique opsin transcript that is expressed in all eight of the photoreceptive units devoted to color vision; and 5) expression patterns in the peripheral hemispheres of the eyes suggest visual specializations not previously recognized in stomatopods. Elucidating the expression patterns of all opsin transcripts expressed in the N. oerstedii retina reveals the potential for previously undocumented functional diversity in the already complex stomatopod eye and is a first step toward understanding the functional significance of the unusual abundance of opsins found in many arthropod species’ visual systems.


2021 ◽  
Vol 9 ◽  
Author(s):  
Dena Jane Clink

Tarsiers are nocturnal animals. They have eyes that are heavier than their brains. They eat only insects and other living things. Tarsiers are primates, just like humans. And some species of tarsiers sing! Tarsier songs and human language are different in many ways. But if we study the similarities, it may help us better understand human language. In our study, we recorded singing tarsiers on the Indonesian island of Sulawesi. With the help of computers, we found that we could tell individual tarsiers apart based on their songs. Being able to recognize who is singing from far away may be an important function of tarsier songs. We also found that if a female speeds up her song, then the male speeds up his song, too. The ability to modify vocal output based on what others are doing is a universal in human language. Our results show that tarsiers (like humans) can change their vocalizations based on what their partner is doing. The fact that tarsiers and humans are both able to do this indicates that their common ancestor probably had this ability. Our results add support to the idea that flexibility in vocal interactions evolved long before the appearance of modern humans.


2021 ◽  
Vol 30 (3) ◽  
pp. 305-316
Author(s):  
Zdravka Kostova ◽  

Analyzes the main positions and critiques of leading hypotheses about the biochemical origin of life as a result of new achievements in natural sciences and technologies. Compares their basic characteristics in respect to proposed geochemical conditions and argued consequences of biochemical processes. Gives description of the last common universal common ancestor of all living things – LUCA.


1992 ◽  
Vol 6 ◽  
pp. 300-300
Author(s):  
Peter J. Wagner

The Archaeogastropoda are one of the most abundant orders of the Paleozoic, but they have received surprizingly little systematic analysis. I have conducted a cladistic analysis of archaeogastropod species appearing during the initial radiation of the clade during the latest Cambrian through the Ordovician. The analysis included over 100 species. Most specimens were from North America, but some European and Asian material was included. The hypothesized phylogeny also includes an additional 40 Ordovician species from a previous cladistic work on a single family (the Lophospiridae), and only the stem members of this clade were included here.The analysis used 54 meristic and 12 morphometric traits encompassing 154 character states. This seemingly large number of character states for a group considered character-poor can be attributed to: 1) the breadth of morphologic diversity produced during the initial phases of the clade's radiation, resulting in nearly all conceivable morphologies being included here; and 2) the high number of character states for “types” of selenizones and sinuses, morphologies absent on most extant gastropods.The results of the analysis suggest the following:1. There were two large clades present by the Early Ordovician that most closely correspond to present definitions of the Murchisonoidea and Euomphaloidea. The clades shared an anisostrophically coiled common ancestor and thus were not derived separately from bellerophonts. However, the Macluritidae appear to have been derived separately from bellerophonts, corroborating a widely held hypothesis.2. Early Paleozoic species presently considered “pleurotomaroids” comprise a polyphyletic assemblage, with the major families independently derived from either the murchisonoid clade (the Eotomaridae, Lophospiridae and Phanerotrematidae) or from the euomphaloid clade (the Liospiridae, Luciellidae and post-Middle Ordovician members of the Raphistomatidae). It had been assumed previously that pleurotomaroids represent the least-derived anisostrophically coiled gastropods, as well-developed selenizones and sinuses were considered primitive traits. However, those features actually represent derived conditions of the Ordovician that appear to have been secondarily lost in later lineages; thus seemingly “modern” appearing early Paleozoic species often simply retained non-derived conditions. As the Mesozoic Pleurotomaria can not be linked with any Early Paleozoic clades, there is no basis for classifying early Paleozoic gastropods in the Pleurotomaroidea.3. The Subulitoidea and Loxonematoidea (which may be ancestral to the Caenogastropoda) evolved separately from murchisonoids. The origins of the Trochoidea are not clear. If the Holopeidae represent the stem members of the Trochoidea, then trochoids evolved from euomphaloids. However, the Platyceratidae also have been linked with trochoids. The earliest known members of that group possess many unique homologies and no obvious synapomorphies with any other archaeogastropods. The taxon can not be linked reliably with holopeids or any other taxon included in this study, and I do not discount the possibility that platyceratids were evolved separately from bellerophonts.4. Gross shell convergences abound, as turritelliform and planispiral-to-hyperstrophic shells both evolved at least four times. However, the combinations of character states used to achieve these gross morphologies differ among clades, allowing “homoplasies” of character complexes to be recognized.


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