Culture and genomic analysis of Symbiopectobacterium purcellii, gen.nov. sp. nov., isolated from the leafhopper Empoasca decipiens

Bacterial endosymbionts are found in multiple arthropod species, where they play crucial roles as nutritional symbionts, defensive symbionts or reproductive parasites. Recent work has highlighted a new clade of heritable microbes within the gammaproteobacteria that enter into both obligate and facultative symbioses, with an obligately required unculturable symbiont recently given the name Cand. Symbiopectobacterium. In this study, we describe a culturable rod shaped non-flagellated bacterial symbiont from this clade isolated from the leafhopper Empoasca decipiens. The symbiont is related to the transovarially-transmitted 'BEV' bacterium that was first isolated from the leafhopper Euscelidius variegatus by Alexander Purcell, and we therefore name the symbiont Symbiopectobacterium purcellii sp. nov. gen. nov. We further report the closed genome sequence for S. purcellii. The genome is atypical for a heritable microbe, being large in size, without profound AT bias and with little evidence of pseudogenization. The genome is predicted to encode Type II, III and VI secretion systems and associated effectors and a non-ribosomal peptide synthase array likely to produce bioactive small molecules. Predicted metabolism is more complete than for other symbionts in the Symbiopectobacterium clade, and the microbe is predicted to synthesize a range of B vitamins. However, Biolog plate analysis indicate metabolism is depauperate compared to the sister clade, represented by Pectobacterium carotovorum. A quorum-sensing pathway related to that of Pectobacterium spp. (containing an overlapping expI-expR1 pair in opposite directions and a "solo" expR2) is evidenced, and LC-MS/MS analysis reveals the presence of 3-hydroxy-C10-HSL as the sole N-acylhomoserine lactone (AHL) in our strain. This AHL profile is profoundly divergent from that of other Erwinia and Pectobacterium spp., which produce mostly 3-oxo-C6- and 3-oxo-C8-HSL and could aid group identification. Thus, this microbe denotes one that has lost certain pathways associated with a saprophytic lifestyle but represents an important baseline against which to compare other members of the genus Symbiopectobacterium that show more profound integration into host biology.

Local environmental context determines the colonisation of leaf shelters by arthropods: an experimental study

The magnitude of facilitation by shelter-building engineers on community structure is expected to be greater when they increase limited resources in the environment. We evaluated the influence of local environmental context on the colonisation of leaf shelters by arthropods in a Mexican evergreen tropical rainforest. We compared the species richness and abundance of arthropods (total and for different guilds) colonising artificially rolled leaves in habitats differing in understory heterogeneity (forest edge > old-growth forests > living fences). Arthropod abundance of the most representative arthropod taxa (i.e., Araneae, Blattodea, Collembola and Psocoptera) colonising the rolled leaves was greater at forest edge, a trend also observed for average arthropod abundance, and for detritivore and predator guilds. In addition, fewer arthropod species and individuals colonised the rolled leaves in the living fence habitat, a trend also observed for most arthropod guilds. As forest edge is expected to have a greater arthropod diversity and stronger density-dependent interactions, a greater limitation of refuges from competitors or predators may have determined the higher colonisation of the rolled leaves in this habitat. Our results demonstrate that local environment context is an important factor that affects the colonisation of arthropods in leaf shelters.

Insecticide, Acaricide, Repellent and Antimicrobial Development

The quick spread of invasive arthropod species worldwide, sometimes boosted by global warming and urbanization [...]

One Bat’s Waste is Another Man’s Treasure: A DNA Metabarcoding Approach for the Assessment of Biodiversity and Ecosystem Services Using Bat Faeces

Arthropod populations are constantly changing due to changes in climate and the globalisation of trade and travel. Effective and diverse monitoring techniques are required to understand these changes. DNA metabarcoding has facilitated the development of a broad monitoring method to sample arthropod diversity from environmental and faecal samples. In this study, we applied DNA metabarcoding to DNA extracted from bat faecal pellets of Rhinolophus hipposideros, the lesser horseshoe bat in Ireland, a highly protected bat species of conservation concern in Europe. From as few as 24 bat faecal pellets, we detected 161 arthropod species, spanning 11 orders, including 38 pest species of which five were determined to be priority pests, highlighting important ecosystem services. We also report the identification 14 species not previously reported in Ireland, but upon further investigation found that many of these are likely misidentified due to inadequacies in the genetic reference database. For the first time, we were able to use non-invasively collected bat samples to examine the role of sex in the diet of bats and found that the male and female diets did not differ significantly. However, sampling location did explain variation within the diet, highlighting how landscape features influence arthropod composition and diversity. We discuss the current limitations of the methodology in Ireland, how these can be overcome in future studies, and how this data can be used for biodiversity monitoring and informing conservation management of protected bat species.

Monitoring Arthropods in Azorean Agroecosystems: the project AGRO-ECOSERVICES

The data we present are part of the AGRO-ECOSERVICES project (Assessing ecosystem services and disservices provided by arthropod species in Azorean agroecosystems). The project aims to evaluate the relative importance of native and non-native organisms as ecosystem services (ES) and disservices (ED) providers, by combining novel, direct and quantitative tools for monitoring agro-biodiversity. Ecosystem services include evaluation of natural pest control by predation, seed predation on weed plants, pollination, decomposition and ecosystem disservices, herbivory and seed predation on crop plants. Active Aerial Searching (AAS) (only in maize-fields) and pitfall traps were used to sample the arthropod biodiversity (predatory spiders, true-bugs and beetles and main insect pests) on four agricultural habitats of Terceira Island, namely citrus orchards, low and high elevation maize fields and vineyards. We provided an inventory of all arthropods recorded in four Azorean agroecosystems (citrus orchards, low and high elevation maize fields and vineyards) from Terceira Island. A total of 50412 specimens were collected, belonging to four classes, 20 orders, 81 families and 200 identified species of arthropods. A total of 127 species are considered introduced (n = 22646) and 69 native non-endemic (n = 24117). Four endemic species were recorded with very few specimens (n = 14) and 3635 specimens belong to unidentified taxa recorded only at genus or family level. Five species are new records for Terceira Island, with Lagria hirta (Linnaeus, 1758) (Coleoptera, Tenebrionidae) being also a new record for the Azores. This publication contributes to a better knowledge of the arthropods communities present in agro-ecosystems of Terceira Island and will serve as a baseline for future monitoring schemes targeting the long-term change in arthropod diversity and abundance.

Trypsin Genes Are Regulated through the miRNA Bantam and Associated with Drug Sensitivity in the Sea Louse Caligus rogercresseyi

The role of trypsin genes in pharmacological sensitivity has been described in numerous arthropod species, including the sea louse Caligus rogercresseyi. This ectoparasite species is mainly controlled by xenobiotic drugs in Atlantic salmon farming. However, the post-transcriptional regulation of trypsin genes and the molecular components involved in drug response remain unclear. In particular, the miRNA bantam family has previously been associated with drug response in arthropods and is also found in C. rogercresseyi, showing a high diversity of isomiRs. This study aimed to uncover molecular interactions among trypsin genes and bantam miRNAs in the sea louse C. rogercresseyi in response to delousing drugs. Herein, putative mRNA/miRNA sequences were identified and localized in the C. rogercresseyi genome through genome mapping and blast analyses. Expression analyses were obtained from the mRNA transcriptome and small-RNA libraries from groups with differential sensitivity to three drugs used as anti-sea lice agents: azamethiphos, deltamethrin, and cypermethrin. The validation was conducted by qPCR analyses and luciferase assay of selected bantam and trypsin genes identified from in silico transcript prediction. A total of 60 trypsin genes were identified in the C. rogercresseyi genome, and 39 bantam miRNAs were differentially expressed in response to drug exposure. Notably, expression analyses and correlation among values obtained from trypsin and bantam revealed an opposite trend and potential binding sites with significant ΔG values. The luciferase assay showed a reduction of around 50% in the expression levels of the trypsin 2-like gene, which could imply that this gene is a potential target for bantam. The role of trypsin genes and bantam miRNAs in the pharmacological sensitivity of sea lice and the use of miRNAs as potential markers in these parasites are discussed in this study.

Molecular identification and diversity of adult arthropod carrion community collected from pig and sheep carcasses within the same locality during different stages of decomposition in the KwaZulu-Natal province of South Africa

The current study aimed at molecular identification and comparing the diversity of arthropods communities between pig and sheep carcasses during the cold and warm season in KwaZulu-Natal province of South Africa. Adult arthropods found on and around the carcasses were collected using either fly traps or forceps. Molecular analyses confirmed the identification of twelve arthropod species collected from both sheep and pig carcasses during the cold season. Results showed that 11 of 12 arthropod species were common in both sheep and pig carcasses, with exception to Onthophagus vacca (Coleoptera: Scarabaeidae) (Linnaeus, 1767) and Atherigona soccata (Diptera: Muscidae) (Rondani, 1871) species which were unique to sheep and pig carcasses respectively. However, during the warm season, the sheep carcass attracted more arthropod (n = 13) species as compared to the pig carcass. The difference in the obtained arthropod was due to the presence of O. vacca which was also unique to the sheep carcass during this season. Furthermore, there was an addition of a beetle species Hycleus lunatus (Coleoptera: Meloidae) (Pallas, 1782), which was collected from both sheep and pig carcasses but unique to the warm season. The pig carcass attracted more dipteran flies during both warm (n = 1,519) and cold season (n = 779) as compared to sheep carcass during the warm (n = 511) and cold season (n = 229). In contrast, coleopterans were more abundant on the sheep carcass during the warm season (n = 391) and cold season (n = 135) as compared to the pig carcass in both warm season (n = 261) and cold season (n = 114). In overall, more flies and beetles were collected on both sheep and pig carcasses during the warm season, and this further highlight that temperature influenced the observed difference in the abundance of collected arthropod between seasons.

Wolbachia reduces virus infection in a natural population of Drosophila

Wolbachia is a maternally transmitted bacterial symbiont that is estimated to infect approximately half of arthropod species. In the laboratory it can increase the resistance of insects to viral infection, but its effect on viruses in nature is unknown. Here we report that in a natural population of Drosophila melanogaster, individuals that are infected with Wolbachia are less likely to be infected by viruses. By characterising the virome by metagenomic sequencing and then testing individual flies for infection, we found the protective effect of Wolbachia was virus-specific, with the prevalence of infection being up to 15% greater in Wolbachia-free flies. The antiviral effects of Wolbachia may contribute to its extraordinary ecological success, and in nature the symbiont may be an important component of the antiviral defences of insects.

Gene Expression Response of the Non-target Gastropod Physella Acuta to Fenoxycarb, a Juvenile Hormone Analog Pesticide

Nowadays, pesticides are an environmental problem because they can act on non-target species. Therefore, the search for new pest control methods has focused on compounds with low or no toxic effects. Analogs of the juvenile hormone are one such group of pesticides since they work by interfering in the endocrine system of arthropods. However, the lack of effect on non-target species is frequently assumed, and it requires confirmation. This article analyzes the impact of Fenoxycarb, an analog of juvenile hormone, on Physella acuta, an aquatic gastropod. Animals exposed for one week to 0.01, 1, and 100 μg/L were used to obtain RNA and perform retrotranscription and real-time PCR. Forty genes related to the endocrine system, the DNA repair mechanisms, the different phases of detoxification, oxidative stress, the stress response, the nervous system, hypoxia, energy metabolism, the immune system, and apoptosis were analyzed. Three of the genes, AchE, Hsp17.9, and ApA, showed responses to the presence of Fenoxycarb at 1 μg/L, with no statistically significant responses in the rest of the genes and at the remaining concentrations. From the results it can be concluded that Fenoxycarb shows low toxicity in Physella acuta. However, the fact that a gene related to immunity was altered prevents any conclusions in relation to the putative long-term effects that this juvenile hormone analog could have. Therefore, additional research would be necessary to confirm the safety of Fenoxycarb in non-arthropod species.

Emotions triggered by live arthropods shed light on spider phobia

Spiders are mostly harmless, yet they often trigger high levels of both fear and disgust, and arachnophobia (the phobia of spiders) ranks among the most common specific animal phobias. To investigate this apparent paradox, we turned to the only close relatives of spiders that pose a real danger to humans: scorpions. We adopted a unique methodology in order to assess authentic emotions elicited by arthropods. Over 300 respondents were asked to rate live specimens of 62 arthropod species (including spiders, scorpions, cockroaches, and other insects) based on perceived fear, disgust, and beauty. We found that species’ scores on all three scales depended on the higher taxon as well as on body size. Spiders, scorpions, and other arachnids scored the highest in fear and disgust, while beetles and crabs scored the highest in beauty. Moreover, all chelicerates were perceived as one cohesive group, distinct from other arthropods, such as insects or crabs. Based on these results, we hypothesize that the fear of spiders might be triggered by a generalized fear of chelicerates, with scorpions being the original stimulus that signals danger.