scholarly journals THE POTENCY OF ANGLE MEASUREMENT AND COMPARISON OF VEIN LENGTHS IN DISTINGUISHING BACTROCERA SPECIES COMPLEXES

2020 ◽  
Vol 20 (2) ◽  
pp. 92-99
Author(s):  
Gesang Pratyadhiraksana ◽  
Tri Murniningtyas Puji Lestari ◽  
Rudi Hari Murti ◽  
Suputa Suputa
Keyword(s):  
Phylogenetic Analysis ◽  
Angle Measurement ◽  
Conclusive Evidence ◽  
Bactrocera Dorsalis ◽  
Coi Gene ◽  
Separate Species ◽  
Species Complexes ◽  
Wing Patterns ◽  
Important Pest ◽  
Quarantine Species

The potency of angle measurement and comparison of vein lengths in distinguishing Bactrocera species complexes. One of the most conspicuous features of Bactrocera fruit flies is their wing, which can be elaborated for identification. The distinctive wing patterns are used to separate species and classify species complexes. The wing shape can be used as a potential discriminator between closely related taxa. To develop wing applications in taxonomy, in this study, the degree measure of angles and the comparisons of vein lengths were investigated quantitatively to distinguish among important pest quarantine species of the Bactrocera dorsalis complex: B. dorsalis and B. carambolae; the B. frauenfeldi complex: B. frauenfeldi and B. albistrigata; and a species belonging to subgenus Zeugodacus, B. cucurbitae. The result showed that species complexes were clustered into significantly different groups based on the degree measure of cell br and the comparison between r-m and dm-cu cross-vein length. This conclusive evidence was supported by phylogenetic analysis using COI gene. This present result indicated that the cell br angle measure and the comparison between r-m and dm-cu vein length could be applied to distinguish species complexes in genus Bactrocera.

scholarly journals Morphological and Phylogenetic Analysis of Eustrongylides sp. and Gnathostoma spinigerum Parasitizing the Asian Swamp Eel Monopterusalbus in China

Pathogens ◽  
2021 ◽  
Vol 10 (6) ◽  
pp. 711
Author(s):  
Sixin Zhang ◽  
Guangping Huang ◽  
Liang Li ◽  
Xianyong Liu ◽  
Xiaoli Tang ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Coi Gene ◽  
Molecular Characteristics ◽  
Mean Intensity ◽  
Gnathostoma Spinigerum ◽  
Zoonotic Parasite ◽  
Third Stage ◽  
Parasite Infections ◽  
Asian Swamp Eel ◽  
Swamp Eel

Nematode infections transmitted to humans by the consumption of wild or cultured eels are increasingly being reported. In the present study, 120 Asian swamp eel, Monopterus albus (Zuiew), individuals collected from China were examined for parasite infections, and 78 larval nematodes were isolated. Morphological and molecular characteristics, including sequence and phylogenetic analysis of the internal transcribed spacer (ITS) and cytochrome c oxidase subunit I (COI) gene regions, were employed to identify these nematodes at the lowest taxonomic level possible. Asian swamp eel was infected with two zoonotic parasite taxa: Gnathostoma spinigerum advanced third-stage larvae, with 6.67% prevalence and mean intensity = 1.25, and Eustrongylides sp. fourth-stage larvae, with 26.67% prevalence and mean intensity = 2.13. These findings evidence the need to enhance public hygiene and food safety awareness toward eel consumption

scholarly journals Case of Human Infestation with Dermanyssus gallinae (Poultry Red Mite) from Swallows (Hirundinidae)

Pathogens ◽  
2021 ◽  
Vol 10 (3) ◽  
pp. 299
Author(s):  
Georgios Sioutas ◽  
Styliani Minoudi ◽  
Katerina Tiligada ◽  
Caterina Chliva ◽  
Alexandros Triantafyllidis ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Cytochrome C ◽  
Cytochrome C Oxidase ◽  
Clinical Symptoms ◽  
Skin Lesions ◽  
Coi Gene ◽  
Dermanyssus Gallinae ◽  
Poultry Red Mite ◽  
Human Form ◽  
Bayesian Phylogenetic Analysis

Dermanyssus gallinae (the poultry red mite, PRM) is an important ectoparasite in the laying hen industry. PRM can also infest humans, causing gamasoidosis, which is manifested as skin lesions characterized by rash and itching. Recently, there has been an increase in the reported number of human infestation cases with D. gallinae, mostly associated with the proliferation of pigeons in cities where they build their nests. The human form of the disease has not been linked to swallows (Hirundinidae) before. In this report, we describe an incident of human gamasoidosis linked to a nest of swallows built on the window ledge of an apartment in the island of Kefalonia, Greece. Mites were identified as D. gallinae using morphological keys and amplifying the Cytochrome C oxidase subunit I (COI) gene by PCR. Bayesian phylogenetic analysis and median-joining network supported the identification of three PRM haplogroups and the haplotype isolated from swallows was identical to three PRM sequences isolated from hens in Portugal. The patient was treated with topical corticosteroids, while the house was sprayed with deltamethrin. After one week, the mites disappeared and clinical symptoms subsided. The current study is the first report of human gamasoidosis from PRM found in swallows’ nest.

A very deep Provanna (Gastropoda: Abyssochrysoidea) discovered from the Shinkai Seep Field, Southern Mariana Forearc

2016 ◽  
Vol 98 (3) ◽  
pp. 439-447 ◽  
Author(s):  
Chong Chen ◽  
Hiromi Kayama Watanabe ◽  
Yasuhiko Ohara
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Shell Height ◽  
Coi Gene ◽  
Undescribed Species ◽  
Bathymetric Range ◽  
Large Size ◽  
C Subunit ◽  
Mariana Forearc ◽  
Chemosynthetic Ecosystems

The ‘Shinkai Seep Field’ is a serpentinite-hosted chemosynthetic ecosystem in the Southern Mariana Forearc. In June 2015 the site was revisited and a number of rissoiform gastropods were collected. Taxonomic investigations revealed that these specimens represent a hitherto undescribed species of Provanna (Gastropoda: Abyssochrysoidea), described herein as Provanna cingulata n. sp. This new species is characterized by numerous spiral keels, lack of significant axial sculpture, rounded and inflated whorls, and large size for the genus. With the shell height exceeding 16.5 mm (may reach 20 mm), it is the largest Provanna species known thus far. Phylogenetic analysis using 411 bp of the cytochrome oxidase c subunit I (COI) gene confirmed its systematic placement within the genus Provanna. This is the only gastropod from a family endemic to chemosynthetic ecosystems thus far known from the ‘Shinkai Seep Field’. Furthermore, with a collection depth of 5687 m, it represents the deepest known bathymetric range for the superfamily Abyssochrysoidea as a whole.

scholarly journals Influences of oceanic islands and the Pleistocene on the biogeography and evolution of two groups of Australasian parrots (Aves: Psittaciformes: Eclectus roratus, Trichoglossus haematodus complex). Rapid evolution and implications for taxonomy and conservation

2016 ◽  
Vol 3 (2) ◽  
pp. 47-66
Author(s):  
Michael P. Braun ◽  
Matthias Reinschmidt ◽  
Thomas Datzmann ◽  
David Waugh ◽  
Rafael Zamora ◽  
...  
Keyword(s):  
Species Complex ◽  
Rapid Evolution ◽  
New Guinea ◽  
Distinct Species ◽  
Genetic Evidence ◽  
Valid Species ◽  
Separate Species ◽  
Species Complexes ◽  
Mitochondrial Cytochrome B ◽  
Avian Diversification

AbstractThe Australasian region is a centre of biodiversity and endemism, mainly based on the tropical climate in combination with the large amount of islands. During the Pleistocene, islands of the Sahul Shelf (Australia, New Guinea, Aru Islands) had been part of the same land mass, while islands within the Wallacea (Lesser Sunda Islands, Moluccas, Sulawesi etc.) remained isolated. We investigated biogeographical avian diversification patterns of two species complexes across the Wallacea and the Sahul Shelf: the Eclectus Parrot Eclectus roratus Wagler, 1832, and the Rainbow Lorikeet Trichoglossus haematodus Linnaeus, 1771. Both species are represented by a large number of described geographical subspecies. We used mitochondrial cytochrome b (cyt b) sequences for phylogenetic and network analysis to detect biogeographic roles of islands and avian diversification patterns. The number of threatened taxa in this region is increasing rapidly and there is an urgent need for (sub-)species conservation in this region. Our study provides first genetic evidence for treating several island taxa as distinct species. In both species complexes similar genetic patterns were detected. Genetic diversification was higher across the islands of the Wallacea than across the islands of the Sahul Shelf. Divergence in E. roratus can be dated back about 1.38 million years ago, whereas in the younger T. haematodus it was 0.80 million years ago. Long distance dispersal was the most likely event for distribution patterns across the Wallacea and Sahul Shelf. The geographic origin of the species-complex Eclectus roratus spp. is supposed to be Wallacean, but for the species-complex Trichoglossus haematodus spp. it is supposed to be non-Wallacean. Trichoglossus euteles, so far considered a distinct species, clearly belongs to the Trichoglossus-haematodus-complex. The only case of sympatry in the complex is the distribution of T. (h.) euteles and T. h. capistratus on Timor, which means a rapid evolution from one ancestor into two distinct species within only 800,000 years. For all other taxa a Checkerboard distribution pattern is present. In this complex, 8 taxa are already treated as separate species (del Hoyo et al. 2014). Based on genetic evidence, the following populations are supported to represent phylogenetic units: (1) N New Guinea (haematodus) incl. Biak (rosenbergii), Bismarck Archipelago (massena), and New Caledonia (deplanchii); (2) Flores (weberi); (3) E Australia (moluccanus) incl. Aru Islands (nigrogularis) and S New Guinea (caeruleiceps); (4) N Australia (rubritorquis); (5) Timor 1st lineage (capistratus) incl. Sumba (fortis); (6) Bali and Lombok (mitchellii); (7) Sumbawa (forsteni); (8) Timor 2nd lineage (euteles). Those 8 phylogenetic units are not identical to the 8 species listed by del Hoyo et al. (2014). Several populations on smaller islands are under decline, a separate species status may lead to a higher conservation status in both species complexes, which are currently listed as “Least Concern”. Eclectus roratus is currently treated as monospecific. Based on genetic evidence, the following populations are suggested being treated as valid species: (1) Sumba (Eclectus cornelia), (2) Tanimbar Islands (E. riedeli), (3) Moluccas (E. roratus), and (4) New Guinea (E. polychloros incl. Aru Islands (E. aruensis), and Solomon Island (E. solomonensis).

A redefinition of the genus Troglocharinus Reitter, 1908, with description of new species (Coleoptera, Leiodidae, Cholevinae, Leptodirini)

Zootaxa ◽  
2021 ◽  
Vol 4926 (2) ◽  
pp. 151-188
Author(s):  
JAVIER FRESNEDA ◽  
VALERIA RIZZO ◽  
JORDI COMAS ◽  
IGNACIO RIBERA
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Phylogenetic Analyses ◽  
Molecular Data ◽  
Valid Species ◽  
Distribution Area ◽  
Undescribed Species ◽  
Separate Species ◽  
Male And Female ◽  
New Material

We redefine the genus Troglocharinus Reitter, 1908 based on a phylogenetic analysis with a combination of mitochondrial and molecular data. We recovered the current Speonomites mengeli (Jeannel, 1910) and S. mercedesi (Zariquiey, 1922) as valid, separate species within the Troglocharinus clade, not directly related to Speonomites Jeannel, 1910, a finding corroborated by a detailed study of the male and female genitalia. In consequence, we reinstate Speonomus mercedesi Zariquiey, 1922 stat. nov. as a valid species, transfer both of them to the genus Troglocharinus, T. mengeli (Jeannel, 1910) comb. nov. and T. mercedesi (Zariquiey, 1922) comb. nov., and redescribe the genus. The study of new material from the distribution area of the former S. mengeli revealed the presence of two undescribed species, T. sendrai sp. nov. and T. fadriquei sp. nov., which we describe herein. We designate the lectotype of Speonomus vinyasi Escolà, 1971 to fix its identity, as among its syntypes there are two different species. In agreement with the results of the phylogenetic analyses we establish the synonymy between the genus Speonomites and Pallaresiella Fresneda, 1998 syn. nv. 

Morphological and molecular characters reveal the status of Pedesta rubella (Devyatkin, 1996) stat. n. and P. similissima (Devyatkin, 2002) syn. n. (Lepidoptera, Hesperiidae)

Zootaxa ◽  
2020 ◽  
Vol 4743 (2) ◽  
pp. 217-231
Author(s):  
MENG LI ◽  
ALEXANDER L. MONASTYRKII ◽  
KIRILL A. KOLESNICHENKO ◽  
ZIHAO LIU ◽  
GUOXI XUE ◽  
...  
Keyword(s):  
Neighbor Joining ◽  
Distribution Map ◽  
Separate Species ◽  
Outgroup Species ◽  
Wing Patterns ◽  
The Status ◽  
Nj Tree ◽  
The Mean ◽  
Coi Sequences ◽  
Molecular Characters

To clarify the relationships of Pedesta submacula (Leech, 1890), P. submacula rubella (Devyatkin, 1996) and P. similissima (Devyatkin, 2002), specimens from various localities in China and Vietnam, including the type materials of P. submacula rubella and P. similissima were examined. A neighbor-joining (NJ) tree was also reconstructed based upon partial COI sequences of 24 ingroup specimens and 4 outgroup species. The result shows that P. similissima is a synonym of P. submacula, and P. submacula rubella belongs to a separate species. The mean Kimura-2-Parameter genetic distance between P. submacula and P. rubella stat. n. is 4.4%. Wing patterns and genitalic structures of these taxa are illustrated and compared. A distribution map of both species is provided. 

DNA barcoding and phylogenetic analysis of bagrid catfish in China based on mitochondrial COI gene

2020 ◽  
Vol 31 (2) ◽  
pp. 73-80
Author(s):  
Rui Zou ◽  
Cong Liang ◽  
Mengmeng Dai ◽  
Xiaodong Wang ◽  
Xiuyue Zhang ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Dna Barcoding ◽  
Coi Gene ◽  
Mitochondrial Coi ◽  
Mitochondrial Coi Gene

Mitochondrial DNA sequence evidence supporting the recognition of a new North Atlantic Pseudostichopus species (Echinodermata: Holothuroidea)

2004 ◽  
Vol 84 (5) ◽  
pp. 1077-1084 ◽  
Author(s):  
Francisco A. Solís-Marín ◽  
David S.M. Billett ◽  
Joanne Preston ◽  
Alex D. Rogers
Keyword(s):  
Dna Sequences ◽  
Mitochondrial Gene ◽  
Distinct Species ◽  
Molecular Study ◽  
Morphological Characters ◽  
Coi Gene ◽  
Species Status ◽  
Separate Species ◽  
The Family ◽  
A New Species

A new species of the synallactid sea cucumber genus Pseudostichopus is described, P. aemulatus sp. nov., based on genetic (DNA sequences of the mitochondrial gene Cytochrome Oxidase I [COI] gene) and morphological characters. A comparative molecular study with two other species of the same genus (P. villosus and P. mollis) and from a different family (Isostichopus fuscus) was carried out in order to clarify its taxonomic identity. The nucleotide distance between P. aemulatus sp. nov. and P. villosus and P. mollis is sufficient to support distinct species status. The estimated difference in the number of amino acids, coded for by a partially sequenced COI gene, within the species of the family Synallactidae ranged from 4 to 18. The phylogenetic analysis clearly supports separate species status of these sympatric morphotypes, as indicated by the morphological analysis.

Systematics and phylogeny of a new cryptic species of Diloma Philippi (Mollusca: Gastropoda: Trochidae) from a novel habitat, the bull kelp holdfast communities of southern New Zealand

2009 ◽  
Vol 23 (1) ◽  
pp. 19 ◽  
Author(s):  
Hamish G. Spencer ◽  
Bruce A. Marshall ◽  
Jonathan M. Waters
Keyword(s):  
Phylogenetic Analysis ◽  
New Zealand ◽  
Cryptic Species ◽  
Coi Gene ◽  
Mitochondrial Cytochrome ◽  
Cytochrome C Oxidase I ◽  
Durvillaea Antarctica ◽  
Novel Habitat ◽  
Kelp Holdfast ◽  
Intertidal Habitats

The seven currently recognised New Zealand species in the gastropod genus Diloma Philippi, 1845 are an important component of New Zealand’s littoral biodiversity across a range of intertidal habitats. A new cryptic species in this genus (Diloma durvillaea, sp. nov.) is described largely on molecular grounds from exposed coasts of the South Island of New Zealand from Lyttelton south, as well as the Auckland Islands. The shell is very similar to D. arida (Finlay, 1926), differing subtly in having stronger spiral ribs and less extensive or no yellow spotting. Phylogenetic analysis of the mitochondrial cytochrome c oxidase I (COI) gene shows these two species are sister-taxa and are more distinct from each other (genetic distance 11.5%) than are the morphologically divergent sister-species D. subrostrata (Gray, 1835) and D. aethiops (Gmelin, 1791) (8.2%), also from New Zealand. The new species is found in a novel habitat for the genus, in the holdfasts and on the blades of the bull kelp, Durvillaea antarctica (Cham.) Har. (Phaeophyta), at the low-tide mark on exposed coasts, whereas D. arida occurs higher up on the shore, as well as in more sheltered situations.

Sign in / Sign up

Export Citation Format

Share Document