scholarly journals Dispersion Corrected r2SCAN Based Global Hybrid Functionals: r2SCANh, r2SCAN0, and r2SCAN50

2021 ◽  
Author(s):  
Markus Bursch ◽  
Hagen Neugebauer ◽  
Sebastian Ehlert ◽  
Stefan Grimme
Keyword(s):  
Structural Parameters ◽  
Main Group ◽  
Basis Set ◽  
Generalized Gradient ◽  
Exchange Correlation ◽  
Hartree Fock ◽  
Exact Exchange ◽  
Hybrid Functionals ◽  
London Dispersion

The re-regularized semilocal meta generalized gradient approximation (meta-GGA) exchange-correlation functional r2SCAN [J. W. Furness, A. D. Kaplan, J. Ning, J. P. Perdew, and J. Sun, J. Phys. Chem. Lett. 11, 8208–8215 (2020)] is used to create the three global hybrid functionals with varying admixtures of Hartree–Fock exact exchange (HFX). The resulting exchange-correlation functionals r2SCANh (10% HFX), r2SCAN0 (25% HFX), and r2SCAN50 (50%HFX) are combined with the recent semi-classical D4 London dispersion correction. The new functionals are assessed for molecular geometries, general main-group, and metalorganic thermochemistry at 26 comprehensive benchmark sets including such as the large GMTKN55, ROST61, and IONPI19 sets. It is shown that a moderate admixture of HFX leads to overall mean percentual improvements of −11 (r2SCANh-D4), −16 (r2SCAN0-D4), and −1% (r2SCAN50-D4) regarding thermochemistry compared to the parental meta-GGA. For organometallic reaction energies and barriers, r2SCAN0-D4 even yields a mean improvement of −35%. The computation of structural parameters does not systematically profit from HFX admixture. Overall, the most promising combination r2SCAN0-D4 performs well for both main-group and organometallic thermochemistry. It yields deviations better or on par with other very well-performing global hybrid functionals such as PW6B95-D4 or PBE0-D4. Regarding systems prone to self-interaction errors (SIE4x4), r2SCAN0-D4 shows reasonable performance, reaching the quality of the range-separated ωB97X-V functional. Accordingly, r2SCAN0-D4 in combination with a sufficiently converged basis set (def2-QZVP(P)) represents a robust and reliable choice for general use in the calculation of thermochemical properties of both, main-group and organometallic chemistry.

Evaluating Transition Metal Barrier Heights with the Latest DFT Exchange–Correlation Functionals – the MOBH35 Benchmark Dataset

2019 ◽  
Author(s):  
Mark Iron ◽  
Trevor Janes
Keyword(s):  
Transition Metal ◽  
Density Functional ◽  
Computational Cost ◽  
Basis Set ◽  
Functional Theory ◽  
Exchange Correlation ◽  
Barrier Heights ◽  
Complete Basis Set ◽  
Complete Basis Set Limit ◽  
Hybrid Functionals

A new database of transition metal reaction barrier heights – MOBH35 – is presented. Benchmark energies (forward and reverse barriers and reaction energy) are calculated using DLPNO-CCSD(T) extrapolated to the complete basis set limit using a Weizmann1-like scheme. Using these benchmark energies, the performance of a wide selection of density functional theory (DFT) exchange–correlation functionals, including the latest from the Truhlar and Head-Gordon groups, is evaluated. It was found, using the def2-TZVPP basis set, that the ωB97M-V (MAD 1.8 kcal/mol), ωB97X-V (MAD 2.1 kcal/mol) and SCAN0 (MAD 2.1 kcal/mol) hybrid functionals are recommended. The double-hybrid functionals PWPB95 (MAD 1.6 kcal/mol) and B2K-PLYP (MAD 1.8 kcal/mol) did perform slightly better but this has to be balanced by their increased computational cost.

scholarly journals Optical Properties of Silver-Mediated DNA from Molecular Dynamics and Time Dependent Density Functional Theory

2018 ◽  
Vol 19 (8) ◽  
pp. 2346 ◽  
Author(s):  
Esko Makkonen ◽  
Patrick Rinke ◽  
Olga Lopez-Acevedo ◽  
Xi Chen
Keyword(s):  
Molecular Dynamics ◽  
Density Functional ◽  
Time Dependent ◽  
Basis Set ◽  
Dna Nanostructures ◽  
Exchange Correlation ◽  
Hartree Fock ◽  
Spurious Peak ◽  
20 Nm ◽  
Dependent Density

We report a combined quantum mechanics/molecular mechanics (QM/MM) molecular dynamics and time-dependent density functional (TDDFT) study of metal-mediated deoxyribonucleic acid (M-DNA) nanostructures. For the Ag + -mediated guanine tetramer, we found the maug-cc-pvdz basis set to be sufficient for calculating electronic circular dichroism (ECD) spectra. Our calculations further show that the B3LYP, CAM-B3LYP, B3LYP*, and PBE exchange-correlation functionals are all able to predict negative peaks in the measured ECD spectra within a 20 nm range. However, a spurious positive peak is present in the CAM-B3LYP ECD spectra. We trace the origins of this spurious peak and find that is likely due to the sensitivity of silver atoms to the amount of Hartree–Fock exchange in the exchange-correlation functional. Our presented approach provides guidance for future computational investigations of other Ag + -mediated DNA species.

Accuracy Assessment of the ROHF-CCSD(T) Calculationsof Dipole Moments of Small Radicals

1998 ◽  
Vol 63 (9) ◽  
pp. 1409-1430 ◽  
Author(s):  
Miroslav Urban ◽  
Pavel Neogrády ◽  
Juraj Raab ◽  
Geerd H. F. Diercksen
Keyword(s):  
Large Deviation ◽  
Theoretical Calculations ◽  
Dipole Moments ◽  
Accuracy Assessment ◽  
Open Shell ◽  
Basis Set ◽  
Coupled Cluster ◽  
Hartree Fock ◽  
Experimental Values

Dipole moments of a series of radicals, OH, NO, NS, SF, SO, PO, ClO, CN, LiO, NO2, and ClO2 were calculated by the Coupled Cluster CCSD(T) method with the single determinant restricted open shell Hartree-Fock (ROHF) reference. For all molecules theoretical dipole moments were carefully compared to experimental values. The size and the quality of the basis set were systematically improved. Spin adaptation in the ROHF-CCSD(T) method, largest single and double excitation amplitudes and the T1 diagnostics were considered as indicators in the quality assessment of calculated dipole moments. For most molecules the accuracy within 0.01-0.03 D was readily obtained. For ClO and CN the spin adaptation was necessary - its contribution was as large as 0.03-0.045 D. Large deviation from experiment is observed for OH in its A2Σ+ excited state (0.135 D) and especially for LiO in its 2Π ground state (0.22 D). No indication of the failure of theoretical calculations was found which leads to the conclusion that, even if there is still a space for the improvement of theoretical calculations, experimental values should be reconsidered.

A Density Functional Study of Structure and Stability of Ni8, Ni8 + and Ni8 − Cluster

2005 ◽  
Vol 1 (4) ◽  
pp. 172-182 ◽  
Author(s):  
Patrizia Calaminici ◽  
Marcela R. Beltrán
Keyword(s):  
Density Functional ◽  
Local Density ◽  
Structural Parameters ◽  
Binding Energies ◽  
Functional Study ◽  
Generalized Gradient ◽  
Exchange Correlation ◽  
Generalized Gradient Approximation ◽  
The Stability ◽  
Anionic Cluster

Density functional calculations of neutral, cationic and anionic nickel octamer are presented. The structure optimization and frequency analysis were performed on the local density approximation (LDA) level with the exchange correlation functional by Vosko,Wilk and Nusair (VWN). Improved calculations for the stability were based on the generalized gradient approximation (GGA) where the exchange correlation functional of Perdew and Wang (PW) was used. For neutral, cationic and anionic cluster several isomers and different spin multiplicities were investigated in order to find the lowest structures. Structural parameters, relative energies, binding energies, harmonic frequencies, adiabatic ionization potential and electron affinity will be presented. The calculated values are compared with available experimental data.

First-Principles Study of Hydrogen Storage in Fe-Ti System

2015 ◽  
Vol 365 ◽  
pp. 266-271
Author(s):  
Ahlem Khadraoui ◽  
Fatima Zohra Bentayeb
Keyword(s):  
Hydrogen Storage ◽  
First Principles ◽  
Real Space ◽  
Basis Set ◽  
Generalized Gradient ◽  
Exchange Correlation ◽  
Correlation Potential ◽  
Energy Cutoff ◽  
Bonding Properties ◽  
Pseudo Potential

In this study, a first-principles investigation of hydrogen storage in the FeTi intermetallic is carried out. The structural and electronic changes due to hydrogen insertion into the FeTi intermetallic are determined using DFT and pseudo-potential calculations through the code SIESTA (Spanish Initiative for Electronic Simulation of Thousand of Atoms). The pseudopotentials are constructed using Troullier and Martins parametrization which describes correctly the ion-electron interactions. To define the real-space grid, necessary for numerical calculations of the electron density, detailed tests were performed in order to choose the appropriate basis set, the energy cutoff and the k-grid cutoff. The exchange-correlation potential is treated with the generalized gradient approximation (GGA). Lattice data, bonding properties and the density of states provide an explanation for the role played by hydrogen in the chemical bond with the Ti and Fe constituents.

scholarly journals Structural and piezoelectric coefficients of AlP under pressure

2018 ◽  
Vol 6 (2) ◽  
pp. 53
Author(s):  
Salah Daoud ◽  
Rabie Mezouar ◽  
Abdelfateh Benmakhlouf
Keyword(s):  
Density Functional ◽  
Structural Parameters ◽  
Generalized Gradient ◽  
Aluminum Phosphide ◽  
Functional Theory ◽  
Exchange Correlation ◽  
Generalized Gradient Approximation ◽  
Zinc Blende ◽  
Density Functional Perturbation Theory ◽  
The Density Functional Theory

The present work aims to investigate the structural parameters and the piezoelectric coefficients of cubic zinc-blende Aluminum phosphide (AlP) under high pressure up to 21 GPa, using plane wave-pseudopotential (PW-PP) approach in the framework of the density functional theory (DFT) and the density functional perturbation theory (DFPT) with the generalized gradient approximation (GGA) for the exchange-correlation functional. The results obtained are analyzed and compared with other data of the literature. The structural parameters and the piezoelectric coefficients calculated here agree well with other data of the literature. We found also that both the direct and converse piezoelectric coefficients increase with increasing pressure up to 21 GPa. 

Evaluating Transition Metal Barrier Heights with the Latest DFT Exchange–Correlation Functionals – the MOBH35 Benchmark Dataset

2019 ◽  
Author(s):  
Mark Iron ◽  
Trevor Janes
Keyword(s):  
Transition Metal ◽  
Density Functional ◽  
Computational Cost ◽  
Basis Set ◽  
Functional Theory ◽  
Exchange Correlation ◽  
Barrier Heights ◽  
Complete Basis Set ◽  
Complete Basis Set Limit ◽  
Hybrid Functionals

A new database of transition metal reaction barrier heights – MOBH35 – is presented. Benchmark energies (forward and reverse barriers and reaction energy) are calculated using DLPNO-CCSD(T) extrapolated to the complete basis set limit using a Weizmann1-like scheme. Using these benchmark energies, the performance of a wide selection of density functional theory (DFT) exchange–correlation functionals, including the latest from the Truhlar and Head-Gordon groups, is evaluated. It was found, using the def2-TZVPP basis set, that the ωB97M-V (MAD 1.8 kcal/mol), ωB97X-V (MAD 2.1 kcal/mol) and SCAN0 (MAD 2.1 kcal/mol) hybrid functionals are recommended. The double-hybrid functionals PWPB95 (MAD 1.6 kcal/mol) and B2K-PLYP (MAD 1.8 kcal/mol) did perform slightly better but this has to be balanced by their increased computational cost.

scholarly journals Hydrogen storage on platinum decorated graphene: A first-principles study

BIBECHANA ◽  
2014 ◽  
Vol 11 ◽  
pp. 113-122 ◽  
Author(s):  
S Lamichhane ◽  
N Pantha ◽  
NP Adhikari
Keyword(s):  
Binding Energy ◽  
First Principles ◽  
Density Functional ◽  
Pristine Graphene ◽  
Generalized Gradient ◽  
Functional Theory ◽  
Exchange Correlation ◽  
London Dispersion ◽  
Quantum Espresso ◽  
London Dispersion Forces

Adsorption of gaseous/molecular hydrogen on platinum (Pt) decorated and pristine graphene have been studied systematically by using density functional theory (DFT) level of calculations implemented by Quantum ESPRESSO codes. The Perdew-Burke-Ernzerhof (PBE) type generalized gradient approximation (GGA) exchange-correlation functional and London dispersion forces have been incorporated in the DFT-D2 level of algorithm for short and long range electron-electron interactions, respectively. With reference to the binding energy of Pt on different symmetry sites of graphene supercells, the bridge (B) site has been predicted as the best adsorption site. In case of 3×3 supercell of graphene (used for detail calculations), the binding energy has been estimated as 2.02 eV. The band structure and density of states calculations of Pt adatom graphene predict changes in electronic/magnetic properties caused by the atom (Pt). The adatom (Pt) also enhances the binding energy per hydrogen molecule in Pt-graphene comparing to that in pristine graphene and records the values within the range of 1.84 eV to 0.13 eV for one to eight molecules, respectively. DOI: http://dx.doi.org/10.3126/bibechana.v11i0.10389 BIBECHANA 11(1) (2014) 113-122

Calculations of Atomic and Electronic Structure for (100) Surfaces of SrTiO3 Perovskite

2002 ◽  
Vol 718 ◽  
Author(s):  
R. I. Eglitis ◽  
E. Heifets ◽  
E. A. Kotomin ◽  
G. Borstel
Keyword(s):  
Density Functional Theory ◽  
Ab Initio ◽  
Density Functional ◽  
Computer Code ◽  
Basis Set ◽  
Surface Relaxation ◽  
Functional Theory ◽  
Exchange Correlation ◽  
Hartree Fock ◽  
Atomic And Electronic Structure

AbstractWe present and discuss main results of the calculations for the surface relaxation and rumpling of SrTiO3 surfaces with TiO2 and SrO terminations using a wide variety of methods of modern computational physics and chemistry, including the shell model (SM) and ab initio methods based on Hartree-Fock (HF) and Density Functional Theory (DFT). The HF and DFT formalisms with different exchange-correlation functionals are implemented into Crystal-98 computer code using a Gaussian-type basis set. We demonstrate that a hybrid B3PW formalism gives the best results for the bulk SrTiO3 properties. Results are compared with previous ab initio plane-wave LDA calculations and LEED experiments. Our calculations demonstrate an increase of the covalency effects between Ti and O atoms near the surface.

AN EVALUATION OF QUANTUM CHEMICAL CALCULATIONS OF REACTION ENERGIES FOR CATALYTIC ACTIVATION PROCESSES: THE ACTIVATION OF PROPANE BY A RHODIUM CATALYST REVISITED

2012 ◽  
Vol 11 (02) ◽  
pp. 297-312 ◽  
Author(s):  
WILLIAN R. ROCHA ◽  
ÉDER S. XAVIER ◽  
JÚLIO C. S. DA SILVA ◽  
ROBERTA P. DIAS ◽  
HÉLIO F. DOS SANTOS ◽  
...  
Keyword(s):  
Ab Initio ◽  
Density Functional ◽  
Structural Parameters ◽  
Relative Energy ◽  
Basis Set ◽  
Geometrical Parameters ◽  
Computationally Efficient ◽  
Hartree Fock ◽  
Rhodium Atom ◽  
Reaction Energies

In this paper we report the state of the art CCSD(T)//MP2 ab initio calculations for the activation of propane by cyclopentadienyl carbonyl rhodium, (Cp)Rh(CO) , using the effective core potential of Hay and Wadt (LANL2DZ) for rhodium atom and the correlated consistent polarized valence double-ξ basis set (cc-pVDZ) for C , H and O atoms. The CCSD(T) energy values are used as reference to assess the effect of electron correlation on the reaction energies, as well as the performance of density functional theory (DFT) energy values using various functionals. An investigation on the accuracy of DFT results is relevant since their use in calculations involving large molecular systems is a computationally efficient strategy that enables us to tackle important problems in organometallics field and supramolecular chemistry. Our results for the small model system show that all DFT functionals used here correctly predict the CCSD(T) energy pattern and also reproduce very satisfactorily the MP2 geometrical parameters. The BP86, PBE1PBE and PW91 functionals exhibited the best agreement with structural parameters and relative energy values as compared with ab initio post-Hartree–Fock results, showing a potential use in theoretical investigations on larger systems.

Sign in / Sign up

Export Citation Format

Share Document