scholarly journals Population Genetics of New Zealand Pagrus auratus and Genetic Variation of an Aquaculture Broodstock

2021 ◽  
Author(s):  
◽  
David T. Ashton
Keyword(s):  
Genetic Variation ◽  
New Zealand ◽  
Ratio Test ◽  
Wild Populations ◽  
Mitochondrial Dna Control Region ◽  
Pagrus Auratus ◽  
Historical Bottlenecks ◽  
Dna Genotyping ◽  
Selection Of ◽  
Recent Bottleneck

<p>Fisheries and aquaculture are major contributors of nutrition and animal protein worldwide. Understanding the genetic variation and differentiation within and between wild populations is important for both sustainable fisheries management and selection of aquaculture broodstock. This study determined the genetic variation and differentiation of New Zealand Pagrus auratus based on mitochondrial DNA control region sequencing and microsatellite DNA genotyping. Low but significant differentiation was measured between several sample sites, but otherwise the population was genetically panmictic. The M-ratio test and Fu’s Fs statistics indicate that there may have been historical bottlenecks at all sample sites and a more recent bottleneck in the Tasman Bay. Two South Island sites were identified that had not been through recent bottlenecks and were not significantly differentiated from the Tasman Bay, which may provide a source of gene flow to aid its genetic recovery. Comparison of the broodstock and wild genetic variation indicate that the broodstock represented most of the genetic variation found in high frequency in wild populations, but further wild-caught individuals may be needed, based on the criteria used in several previous studies. Simulations indicate that adding approximately 20 and 48 wild-caught individuals from multiple populations to the current broodstock was needed to represent all genetic variation above a target frequency of 0.05 in the Tasman Bay and all sample sites, respectively.</p>

scholarly journals Population Genetics of New Zealand Pagrus auratus and Genetic Variation of an Aquaculture Broodstock

2021 ◽  
Author(s):  
◽  
David T. Ashton
Keyword(s):  
Genetic Variation ◽  
New Zealand ◽  
Ratio Test ◽  
Wild Populations ◽  
Mitochondrial Dna Control Region ◽  
Pagrus Auratus ◽  
Historical Bottlenecks ◽  
Dna Genotyping ◽  
Selection Of ◽  
Recent Bottleneck

<p>Fisheries and aquaculture are major contributors of nutrition and animal protein worldwide. Understanding the genetic variation and differentiation within and between wild populations is important for both sustainable fisheries management and selection of aquaculture broodstock. This study determined the genetic variation and differentiation of New Zealand Pagrus auratus based on mitochondrial DNA control region sequencing and microsatellite DNA genotyping. Low but significant differentiation was measured between several sample sites, but otherwise the population was genetically panmictic. The M-ratio test and Fu’s Fs statistics indicate that there may have been historical bottlenecks at all sample sites and a more recent bottleneck in the Tasman Bay. Two South Island sites were identified that had not been through recent bottlenecks and were not significantly differentiated from the Tasman Bay, which may provide a source of gene flow to aid its genetic recovery. Comparison of the broodstock and wild genetic variation indicate that the broodstock represented most of the genetic variation found in high frequency in wild populations, but further wild-caught individuals may be needed, based on the criteria used in several previous studies. Simulations indicate that adding approximately 20 and 48 wild-caught individuals from multiple populations to the current broodstock was needed to represent all genetic variation above a target frequency of 0.05 in the Tasman Bay and all sample sites, respectively.</p>

scholarly journals Selection of optimal spawning pairs to maintain genetic variation among captive populations of Acipenseridae based on the polymorphism of microsatellite loci

2016 ◽  
Vol 24 (2) ◽  
pp. 77-84 ◽  
Author(s):  
Dariusz Kaczmarczyk
Keyword(s):  
Genetic Variation ◽  
Computer Program ◽  
Microsatellite Loci ◽  
Fish Farm ◽  
Actual Data ◽  
Wild Populations ◽  
Captive Populations ◽  
In Captivity ◽  
Theoretical Paper ◽  
Selection Of

Abstract The American paddlefish, Polyodon spathula (Walbaum), is an endangered acipenserid fish. Its wild populations are supplemented with stocking material that is obtained by conducting artificial spawning in aquaculture conditions. When fish are bred in captivity, it is important to select breeding pairs that will produce the most genetically diverse progeny, since this permits maintaining the fitness of wild populations. Breeding pairs of land animals are selected successfully based on the polymorphism of their microsatellite loci. This theoretical paper asks how to adapt this technique to fish so that American paddlefish spawners can be paired with the aim of producing restocking material in aquaculture that maintains genetic variation. To test our calculating techniques, we used actual data on the polymorphism of the microsatellites from paddlefish broodstock at the Pogorze fish farm (Poland). The data enabled us to do calculations that showed which spawner pairs would create the most genetically diverse offspring and how to assemble sets of spawning pairs that would be best for maintaining genetic variation. The method presented in this paper can be used for breeding fish in aquaculture to help conserve species. It could also be used in a computer program which would automate calculations and present them in easy-to-read tables and graphs.

THE PERFORMANCE OF S170 TALL FESCUE IN CANTERBURY

1974 ◽  
pp. 214-215
Author(s):  
B.R. Watkin
Keyword(s):  
New Zealand ◽  
White Clover ◽  
Tall Fescue ◽  
Trifolium Repens ◽  
Festuca Arundinacea ◽  
Sheep Grazing ◽  
Selection Of

AN Aberystwyth selection of tall fescue (Festuca arundinacea Schreb.), known as S170, was sown with certified New Zealand white clover (Trifolium repens) and re' clover (T. pratense) and compared under sheep grazing with other grass/clover pastures at the Grasslands Division Regional Station at Lincoln (Watkin, 1975) .

scholarly journals Estimated six per cent loss of genetic variation in wild populations since the industrial revolution

2019 ◽  
Vol 12 (8) ◽  
pp. 1505-1512 ◽  
Author(s):  
Deborah M. Leigh ◽  
Andrew P. Hendry ◽  
Ella Vázquez‐Domínguez ◽  
Vicki L. Friesen
Keyword(s):  
Genetic Variation ◽  
Industrial Revolution ◽  
Wild Populations

scholarly journals Do living ex situ collections capture the genetic variation of wild populations? A molecular analysis of two relict tree species, Zelkova abelica and Zelkova carpinifolia

2014 ◽  
Vol 23 (12) ◽  
pp. 2945-2959 ◽  
Author(s):  
Camille Christe ◽  
Gregor Kozlowski ◽  
David Frey ◽  
Laurence Fazan ◽  
Sébastien Bétrisey ◽  
...  
Keyword(s):  
Genetic Variation ◽  
Molecular Analysis ◽  
Tree Species ◽  
Ex Situ ◽  
Wild Populations ◽  
Ex Situ Collections

scholarly journals Genetic variation in the dietary sucrose modulation of enzyme activities in Drosophila melanogaster

1984 ◽  
Vol 43 (3) ◽  
pp. 307-321 ◽  
Author(s):  
Billy W. Geer ◽  
Cathy C. Laurie-Ahlberg
Keyword(s):  
Drosophila Melanogaster ◽  
Genetic Variation ◽  
Enzyme Activities ◽  
Glycogen Synthesis ◽  
Krebs Cycle ◽  
Natural Populations ◽  
Substitution Lines ◽  
Chromosome Substitution Lines ◽  
High Sucrose Diet ◽  
Selection Of

SUMMARYGenetic variation in the modulating effect of dietary sucrose was assessed in Drosophila melanogaster by examining 27 chromosome substitution lines coisogenic for the X and second chromosomes and possessing different third isogenic chromosomes derived from natural populations. An increase in the concentration of sucrose from 0·1% to 5% in modified Sang's medium C significantly altered the activities of 11 of 15 enzyme activities in third instar larvae, indicating that dietary sucrose modulates many, but not all, of the enzymes of D. melanogaster. A high sucrose diet promoted high activities of enzymes associated with lipid and glycogen synthesis and low activities of enzymes of the glycolytic and Krebs cycle pathways, reflecting the physiological requirements of the animal. Analyses of variance revealed significant genetic variation in the degrees to which sucrose modulated several enzyme activities. Analysis of correlations revealed some relationships between enzymes in the genetic effects on the modulation process. These observations suggest that adaptive evolutionary change may depend in part on the selection of enzyme activity modifiers that are distributed throughout the genome.

Genetic variation in an orchardgrass population promises successful direct or indirect selection of superior drought tolerant genotypes

2018 ◽  
Vol 137 (6) ◽  
pp. 928-935 ◽  
Author(s):  
Mozhgan Abtahi ◽  
Mohammad Mahdi Majidi ◽  
Behnam Hoseini ◽  
Aghafakhr Mirlohi ◽  
Bahram Araghi ◽  
...  
Keyword(s):  
Genetic Variation ◽  
Indirect Selection ◽  
Drought Tolerant ◽  
Selection Of

scholarly journals Evidence of between-population differences in natural selection on extra-floral nectaries of the shrub Anemopaegma album (Bignoniaceae)

Botany ◽  
2016 ◽  
Vol 94 (3) ◽  
pp. 201-213
Author(s):  
Anselmo Nogueira ◽  
Pedro J. Rey ◽  
Julio M. Alcántara ◽  
Lúcia G. Lohmann
Keyword(s):  
Genetic Variation ◽  
Natural Selection ◽  
Evolutionary Ecology ◽  
Common Garden ◽  
Phenotypic Selection ◽  
Population Differences ◽  
Wild Populations ◽  
Neotropical Savanna ◽  
Foliar Damage ◽  
Floral Nectaries

Extra-floral nectaries (EFNs) are thought to represent protective adaptations against herbivory, but studies on the evolutionary ecology of EFNs have seldom been conducted. Here we investigate the patterns of natural selection and genetic variation in EFN traits in two wild populations of Anemopaegma album Mart. ex DC. (Bignoniaceae) that have been previously described as contrasting EFN – ant adapted localities in the Neotropical savanna (Cristália and Grão Mogol). In each population, four EFN descriptors, foliar damage, and reproductive success variables were measured per plant (100–120 plants per population). To estimate the heritability of EFN traits, we crossed reproductive plants in the field, and grew offspring plants in a common garden. The results showed that ant assemblages differed between populations, as did the range of foliar herbivory. Genetic variation and positive phenotypic selection in EFN abundance were only detected in the Cristália population, in which plants with more EFNs were more likely to reproduce. An evaluation of putative causal links conducted by path analysis corroborated the existence of phenotypic selection on EFNs, which was mediated by the herbivory process in the Cristália population. While EFNs could be currently under selection in Cristália, it is possible that past selection may have driven EFN traits to become locally adapted to the local ant assemblage in the Grão Mogol population.

scholarly journals Evaluation of Genetic Variation Among Wild Populations and Local Varieties of Rice

Rice ◽  
2011 ◽  
Vol 4 (3-4) ◽  
pp. 170-177 ◽  
Author(s):  
Takashige Ishii ◽  
Takashi Hiraoka ◽  
Tomoyuki Kanzaki ◽  
Masahiro Akimoto ◽  
Rieko Shishido ◽  
...  
Keyword(s):  
Genetic Variation ◽  
Wild Populations ◽  
Local Varieties

scholarly journals Genetic variation in native and farmed populations of Tambaqui (Colossoma macropomum) in the Brazilian Amazon: regional discrepancies in farming systems

2013 ◽  
Vol 85 (4) ◽  
pp. 1439-1447 ◽  
Author(s):  
Jonas Aguiar ◽  
Horacio Schneider ◽  
Fatima Gomes ◽  
Jeferson Carneiro ◽  
Simoni Santos ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Genetic Variation ◽  
Dna Sequences ◽  
Amazon Basin ◽  
Farming Systems ◽  
Wild Populations ◽  
The West ◽  
Colossoma Macropomum ◽  
Breeding Stock ◽  
History Of

The tambaqui, Colossoma macropomum, is the most popular fish species used for aquaculture in Brazil but there is no study comparing genetic variation among native and farmed populations of this species. In the present study, we analyzed DNA sequences of the mitochondrial DNA to evaluate the genetic diversity among two wild populations, a fry-producing breeding stock, and a sample of fish farm stocks, all from the region of Santarém, in the west of the Brazilian state of Pará. Similar levels of genetic diversity were found in all the samples and surprisingly the breeding stock showed expressive representation of the genetic diversity registered on wild populations. These results contrast considerably with those of the previous study of farmed stocks in the states of Amapá, Pará, Piauí, and Rondônia, which recorded only two haplotypes, indicating a long history of endogamy in the breeding stocks used to produce fry. The results of the two studies show two distinct scenarios of tambaqui farming in the Amazon basin, which must be better evaluated in order to guarantee the successful expansion of this activity in the region, and the rest of Brazil, given that the tambaqui and its hybrids are now farmed throughout the country.

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