scholarly journals The Durability of Quantitative Host Resistance and Variability in Pathogen Virulence in the Interaction Between European Grapevine Cultivars and Plasmopara viticola

2021 ◽  
Vol 3 ◽  
Author(s):  
Lisa Heyman ◽  
Rebecca Höfle ◽  
Anna Kicherer ◽  
Oliver Trapp ◽  
Essaid Ait Barka ◽  
...  
Keyword(s):  
Host Resistance ◽  
Quantitative Resistance ◽  
Plasmopara Viticola ◽  
Resistance Mechanisms ◽  
Evolutionary Potential ◽  
Basal Resistance ◽  
Hormonal Responses ◽  
Grapevine Downy Mildew ◽  
Pathogen Virulence ◽  
Important Challenge

European grapevine, Vitis vinifera, carries no major resistances against Plasmopara viticola, the causal agent of grapevine downy mildew. The introgression of quantitative trait loci conferring resistance to P. viticola (Rpv) from American and Asian donor species has resulted in a range of resistant cultivars. In light of the perennial nature of grapevine and the high evolutionary potential of P. viticola, the durability of this quantitative resistance is an important challenge. Durability of host resistance and variability in pathogen virulence may be evaluated by describing interactions between pathogen isolates and grapevine cultivars in terms of Rpv loci. A set of 16 cultivars carrying different combinations of Rpv loci, was challenged with five P. viticola isolates, obtained from susceptible or Rpv3.1+V. vinifera cultivars. Based on the severity of sporulation, different host and pathogen phenotypes might be distinguished, which could be related to the presence of different Rpv loci. The hormonal responses before and during some interactions were compared to assess the resistance mechanisms underlying Rpv3.1, Rpv10, and Rpv12 and the infection mechanisms of the different isolates. This paper reports on the strength of some of the commonly used Rpv loci, single or stacked. The isolates derived from Rpv3.1+ hosts, GREPv1 and GPHPv1, were able to sporulate intensely on cultivars carrying Rpv3.1, without triggering necrosis. Moreover, Rpv10 was not able to efficiently halt the development of the Rpv3.1-breaking isolate GPHPv1. Cultivars carrying Rpv12, however, were resistant to all five P. viticola isolates. Phytohormones might be implicated in the basal resistance against this pathogen, but during the early defense response, no significant hormonal responses to the isolates were observed. The isolate-specificity of the Rpv3- and Rpv10-mediated resistance suggests that these loci do not result in the most sustainable resistance. Furthermore, the isolate-specific behavior of the pathogen emphasizes the need for a characterization system for P. viticola. A standardized phenotyping assay may be used to determine P. viticola pathogen phenotypes or measure the durability, strength, and isolate-specificity of the host quantitative resistances. The characterization of both components of the pathosystem may lead to an increased understanding of the resistance mechanisms, beneficial for a durable deployment of resistance genes.

scholarly journals Draft Genome Sequence of Plasmopara viticola , the Grapevine Downy Mildew Pathogen

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Yann Dussert ◽  
Jérôme Gouzy ◽  
Sylvie Richart-Cervera ◽  
Isabelle D. Mazet ◽  
Laurent Delière ◽  
...  
Keyword(s):  
Downy Mildew ◽  
Genome Sequence ◽  
Genome Analysis ◽  
Plant Pathogen ◽  
Host Resistance ◽  
Draft Genome ◽  
Plasmopara Viticola ◽  
Host Specialization ◽  
Grapevine Downy Mildew ◽  
Plant Pathogen Interactions

Plasmopara viticola is a biotrophic pathogenic oomycete responsible for grapevine downy mildew. We present here the first draft of the P. viticola genome. Analysis of this sequence will help in understanding plant-pathogen interactions in oomycetes, especially pathogen host specialization and adaptation to host resistance.

scholarly journals A High-Quality Grapevine Downy Mildew Genome Assembly Reveals Rapidly Evolving and Lineage-Specific Putative Host Adaptation Genes

2019 ◽  
Vol 11 (3) ◽  
pp. 954-969 ◽  
Author(s):  
Yann Dussert ◽  
Isabelle D Mazet ◽  
Carole Couture ◽  
Jérôme Gouzy ◽  
Marie-Christine Piron ◽  
...  
Keyword(s):  
Downy Mildew ◽  
Genome Assembly ◽  
Population Genomics ◽  
Plasmopara Viticola ◽  
Plant Diseases ◽  
Host Specialization ◽  
Grapevine Downy Mildew ◽  
Downy Mildews ◽  
Genes Encoding ◽  
High Level

Abstract Downy mildews are obligate biotrophic oomycete pathogens that cause devastating plant diseases on economically important crops. Plasmopara viticola is the causal agent of grapevine downy mildew, a major disease in vineyards worldwide. We sequenced the genome of Pl. viticola with PacBio long reads and obtained a new 92.94 Mb assembly with high contiguity (359 scaffolds for a N50 of 706.5 kb) due to a better resolution of repeat regions. This assembly presented a high level of gene completeness, recovering 1,592 genes encoding secreted proteins involved in plant–pathogen interactions. Plasmopara viticola had a two-speed genome architecture, with secreted protein-encoding genes preferentially located in gene-sparse, repeat-rich regions and evolving rapidly, as indicated by pairwise dN/dS values. We also used short reads to assemble the genome of Plasmopara muralis, a closely related species infecting grape ivy (Parthenocissus tricuspidata). The lineage-specific proteins identified by comparative genomics analysis included a large proportion of RxLR cytoplasmic effectors and, more generally, genes with high dN/dS values. We identified 270 candidate genes under positive selection, including several genes encoding transporters and components of the RNA machinery potentially involved in host specialization. Finally, the Pl. viticola genome assembly generated here will allow the development of robust population genomics approaches for investigating the mechanisms involved in adaptation to biotic and abiotic selective pressures in this species.

scholarly journals First Insights into the Effect of Mycorrhizae on the Expression of Pathogen Effectors during the Infection of Grapevine with Plasmopara viticola

2021 ◽  
Vol 13 (3) ◽  
pp. 1226
Author(s):  
Ana Cruz-Silva ◽  
Andreia Figueiredo ◽  
Mónica Sebastiana
Keyword(s):  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizal ◽  
Plasmopara Viticola ◽  
Vitis Vinifera L ◽  
Wine Production ◽  
Grapevine Downy Mildew ◽  
Pathogen Effectors ◽  
Rxlr Effectors ◽  
Mycorrhizal Inoculation ◽  
And Control

Grapevine (Vitis vinifera L.), widely used for berry and wine production, is highly susceptible to the pathogenic oomycete Plasmopara viticola, the etiological agent of grapevine downy mildew disease. The method commonly used to prevent and control P. viticola infection relies on multiple applications of chemical fungicides. However, with European Union goals to lower the usage of such chemicals in viticulture there is a need to develop new and more sustainable strategies. The use of beneficial microorganisms with biocontrol capabilities, such as the arbuscular mycorrhizal fungi (AMF), has been pointed out as a viable alternative. With this study, we intended to investigate the effect of AMF colonization on the expression of P. viticola effectors during infection of grapevine. Grapevine plants were inoculated with the AMF Rhizophagus irregularis and, after mycorrhizae development, plants were infected with P. viticola. The expression of P. viticola RxLR effectors was analyzed by real-time PCR (qPCR) during the first hours of interaction. Results show that pre-mycorrhizal inoculation of grapevine alters the expression of several P. viticola effectors; namely, PvRxLR28, which presented decreased expression in mycorrhizal plants at the two time points post-infection tested. These results suggest that the pre-inoculation of grapevine with AMF could interfere with the pathogen’s ability to infect grapevine by modulation of pathogenicity effectors expression, supporting the hypothesis that AMF can be used to increase plant resistance to pathogens and promote more sustainable agriculture practices, particularly in viticulture.

scholarly journals Characterization of the First OXA-10 Natural Variant with Increased Carbapenemase Activity

2018 ◽  
Vol 63 (1) ◽  
Author(s):  
Stathis D. Kotsakis ◽  
Carl-Fredrik Flach ◽  
Mohammad Razavi ◽  
D. G. Joakim Larsson
Keyword(s):  
Carbapenem Resistance ◽  
Catalytic Efficiency ◽  
Resistance Mechanisms ◽  
Broad Host Range ◽  
Evolutionary Potential ◽  
Class D ◽  
Steady State Kinetic ◽  
Natural Variant ◽  
Hydrolyzing Enzymes ◽  
Catalytic Motif

ABSTRACTWhile carbapenem resistance in Gram-negative bacteria is mainly due to the production of efficient carbapenemases, β-lactamases with a narrower spectrum may also contribute to resistance when combined with additional mechanisms. OXA-10-type class D β-lactamases, previously shown to be weak carbapenemases, could represent such a case. In this study, two novel OXA-10 variants were identified as the sole carbapenem-hydrolyzing enzymes in meropenem-resistant enterobacteria isolated from hospital wastewater and found by next-generation sequencing to express additional β-lactam resistance mechanisms. The new variants, OXA-655 and OXA-656, were carried by two related IncQ1 broad-host-range plasmids. Compared to the sequence of OXA-10, they both harbored a Thr26Met substitution, with OXA-655 also bearing a leucine instead of a valine in position 117 of the SAV catalytic motif. Susceptibility profiling of laboratory strains replicating the naturalblaOXAplasmids and of recombinant clones expressing OXA-10 and the novel variants in an isogenic background indicated that OXA-655 is a more efficient carbapenemase. The carbapenemase activity of OXA-655 is due to the Val117Leu substitution, as shown by steady-state kinetic experiments, where thekcatof meropenem hydrolysis was increased 4-fold. In contrast, OXA-655 had no activity toward oxyimino-β-lactams, while its catalytic efficiency against oxacillin was significantly reduced. Moreover, the Val117Leu variant was more efficient against temocillin and cefoxitin. Molecular dynamics indicated that Val117Leu affects the position 117-Leu155 interaction, leading to structural shifts in the active site that may alter carbapenem alignment. The evolutionary potential of OXA-10 enzymes toward carbapenem hydrolysis combined with their spread by promiscuous plasmids indicates that they may pose a future clinical threat.

scholarly journals Isolation of Plasmopara viticola from Grapevine Leaves

Proceedings ◽  
2019 ◽  
Vol 29 (1) ◽  
pp. 34
Author(s):  
Camelia Ungureanu ◽  
Liliana Cristina Soare ◽  
Diana Vizitiu ◽  
Mirela Calinescu ◽  
Irina Fierascu ◽  
...  
Keyword(s):  
Downy Mildew ◽  
Plasmopara Viticola ◽  
Grapevine Downy Mildew ◽  
Grapevine Leaves ◽  
Downy Mildew Disease

In order to test some biofungicides, the isolation of Plasmopara viticola was carried out.Plasmopara viticola is a fungus that causes the grapevine downy mildew disease [...]

scholarly journals Synthetic Lethality Screening Identifies FDA-Approved Drugs that Overcome ATP7B-Mediated Tolerance of Tumor Cells to Cisplatin

Cancers ◽  
2020 ◽  
Vol 12 (3) ◽  
pp. 608 ◽  
Author(s):  
Marta Mariniello ◽  
Raffaella Petruzzelli ◽  
Luca G. Wanderlingh ◽  
Raffaele La Montagna ◽  
Annamaria Carissimo ◽  
...  
Keyword(s):  
Amphotericin B ◽  
Therapeutic Potential ◽  
Synthetic Lethality ◽  
Resistance Mechanisms ◽  
Ovarian Cancer Cells ◽  
Tumor Resistance ◽  
Development Of Resistance ◽  
Wide Range ◽  
Important Challenge ◽  
Approved Drugs

Tumor resistance to chemotherapy represents an important challenge in modern oncology. Although platinum (Pt)-based drugs have demonstrated excellent therapeutic potential, their effectiveness in a wide range of tumors is limited by the development of resistance mechanisms. One of these mechanisms includes increased cisplatin sequestration/efflux by the copper-transporting ATPase, ATP7B. However, targeting ATP7B to reduce Pt tolerance in tumors could represent a serious risk because suppression of ATP7B might compromise copper homeostasis, as happens in Wilson disease. To circumvent ATP7B-mediated Pt tolerance we employed a high-throughput screen (HTS) of an FDA/EMA-approved drug library to detect safe therapeutic molecules that promote cisplatin toxicity in the IGROV-CP20 ovarian carcinoma cells, whose resistance significantly relies on ATP7B. Using a synthetic lethality approach, we identified and validated three hits (Tranilast, Telmisartan, and Amphotericin B) that reduced cisplatin resistance. All three drugs induced Pt-mediated DNA damage and inhibited either expression or trafficking of ATP7B in a tumor-specific manner. Global transcriptome analyses showed that Tranilast and Amphotericin B affect expression of genes operating in several pathways that confer tolerance to cisplatin. In the case of Tranilast, these comprised key Pt-transporting proteins, including ATOX1, whose suppression affected ability of ATP7B to traffic in response to cisplatin. In summary, our findings reveal Tranilast, Telmisartan, and Amphotericin B as effective drugs that selectively promote cisplatin toxicity in Pt-resistant ovarian cancer cells and underscore the efficiency of HTS strategy for identification of biosafe compounds, which might be rapidly repurposed to overcome resistance of tumors to Pt-based chemotherapy.

scholarly journals Identification of the First Oomycete Mating-type Locus Sequence in the Grapevine Downy Mildew Pathogen, Plasmopara viticola

2020 ◽  
Vol 30 (20) ◽  
pp. 3897-3907.e4 ◽  
Author(s):  
Yann Dussert ◽  
Ludovic Legrand ◽  
Isabelle D. Mazet ◽  
Carole Couture ◽  
Marie-Christine Piron ◽  
...  
Keyword(s):  
Downy Mildew ◽  
Mating Type ◽  
Plasmopara Viticola ◽  
Type Locus ◽  
Grapevine Downy Mildew ◽  
Mating Type Locus

scholarly journals Wood Tannins - Isolation and Significance in Host Resistance to Verticillium Wilt Disease

1967 ◽  
Vol 20 (2) ◽  
pp. 475 ◽  
Author(s):  
TC Somers ◽  
AF Harrison
Keyword(s):  
Heart Disease ◽  
Disease Resistance ◽  
Verticillium Wilt ◽  
Host Resistance ◽  
Total Phenolics ◽  
Resistance Mechanisms ◽  
Wilt Disease ◽  
Fivefold Increase ◽  
Verticillium Albo Atrum

Apricot trees often recover from the "black heart" disease incited by the fungus Verticillium albo-atrum Reinke & Berthold, and a characteristic of such resistant trees is that the infected wood becomes dark brown to black in colour (Dufrenoy and Dufrenoy 1927). The fungus dies 1-6 months after it has colonized the wood (Taylor 1963). Analysis of total phenolics by the Folin-Denis assay showed an approximate fivefold increase (to about 60 mgjg wood) compared with that of uninfected wood of the same branch, and suggested their involvement in disease resistance mechanisms.

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