scholarly journals Circular RNA, microRNA and Protein Profiles of the Longissimus Dorsi of Germany ZIKA and Sichuan White Rabbits

2021 ◽  
Vol 12 ◽  
Author(s):  
Xiangyu Zhang ◽  
Cuixia Zhang ◽  
Chao Yang ◽  
Liangde Kuang ◽  
Jie Zheng ◽  
...  
Keyword(s):  
Meat Quality ◽  
Muscle Fiber ◽  
Noncoding Rna ◽  
Muscle Development ◽  
Fiber Type ◽  
Muscle Fiber Type ◽  
Circular Rnas ◽  
Longissimus Dorsi ◽  
Protein Profiles

Due to the dietetic properties and remarkable nutritive value of rabbit meat, its industry is increasing rapidly. However, the association between circular RNAs, microRNAs, and proteins and muscle fiber type, and meat quality of rabbit is still unknown. Here, using deep sequencing and iTRAQ proteomics technologies we first identified 3159 circRNAs, 356 miRNAs, and 755 proteins in the longissimus dorsi tissues from Sichuan white (SCWrabs) and Germany great line ZIKA rabbits (ZIKArabs). Next, we identified 267 circRNAs, 3 miRNAs, and 29 proteins differentially expressed in the muscle tissues of SCWrabs and ZIKArabs. Interaction network analysis revealed some key regulation relationships between noncoding RNAs and proteins that might be associated with the muscle fiber type and meat quality of rabbit. Further, miRNA isoforms and gene variants identified in SCWrabs and ZIKArabs revealed some pathways and biological processes related to the muscle development. This is the first study of noncoding RNA and protein profiles for the two rabbit breeds. It provides a valuable resource for future studies in rabbits and will improve our understanding of the molecular regulation mechanisms in the muscle development of livestock. More importantly, the output of our study will benefit the researchers and producers in the rabbit breeding program.

scholarly journals Influence of Maternal Corn Supplementation of Beef Cattle on Muscle Fiber Type and Meat Quality of their Offspring

2019 ◽  
Vol 3 (2) ◽  
pp. 158-159
Author(s):  
D. Maharjan ◽  
A. Rodas-González ◽  
A. R. Tanner ◽  
V. C. Kennedy ◽  
J. D. Kirsch ◽  
...  
Keyword(s):  
Beef Cattle ◽  
Meat Quality ◽  
Muscle Fiber ◽  
Fiber Type ◽  
Muscle Fiber Type

Muscle fiber type, postmortem metabolism, and meat quality of Nellore cattle with different post-weaning growth potential

2020 ◽  
pp. 104348
Author(s):  
Mariane Beline ◽  
Juan Fernando Morales Gómez ◽  
Daniel Silva Antonelo ◽  
Juliana Silva ◽  
Vicente Luiz Macedo Buarque ◽  
...  
Keyword(s):  
Meat Quality ◽  
Muscle Fiber ◽  
Fiber Type ◽  
Growth Potential ◽  
Muscle Fiber Type ◽  
Nellore Cattle

scholarly journals Identification and Characterization of Circular RNAs in Longissimus Dorsi Muscle Tissue from Two Goat Breeds using RNA-Seq

2021 ◽  
Author(s):  
Jiyuan Shen ◽  
Huimin Zhen ◽  
Lu Li ◽  
Yuting Zhang ◽  
Jiqing Wang ◽  
...  
Keyword(s):  
Skeletal Muscle ◽  
Muscle Fiber ◽  
Muscle Development ◽  
Production Performance ◽  
Differentially Expressed ◽  
Circular Rnas ◽  
Longissimus Dorsi ◽  
Rna Seq ◽  
Skeletal Muscle Development ◽  
Fiber Size

Abstract Background: Circular RNAs (circRNAs) are a class of non-coding RNA that play crucial roles in the development of skeletal muscle. However, little is known about the role of circRNAs in caprine skeletal muscle. In this study, the muscle fiber size and expression profiles of circRNAs were compared in Longissimus dorsi muscle of Liaoning cashmere (LC) goats and Ziwuling black (ZB) goats with significant phenotypic differences in meat production performance, using hematoxylin and eosin staining and RNA-Seq, respectively.Results: The muscle fiber size in LC goats were larger than those in ZB goats (P < 0.05). A total of 10,875 circRNAs were identified and 214 of these were differentially expressed between the two caprine breeds. The authentication and expression levels of 20 circRNAs were confirmed using reverse transcriptase-polymerase chain reaction (RT-PCR) and DNA sequencing. The parent genes of differentially expressed circRNAs were mainly enriched in connective tissue development, Rap1, cGMP-PKG, cAMP and Ras signaling pathway. Some miRNAs reportedly associated with skeletal muscle development and intramuscular fat deposition would be targeted by several differentially expressed circRNAs and the most highly expressed circRNA (circ_001086).Conclusion: These results provide an improved understanding of the functions of circRNAs in skeletal muscle development of goats.

scholarly journals The long noncoding RNA MyHC IIA/X-AS contributes to skeletal muscle myogenesis and maintains the fast fiber phenotype

2020 ◽  
Vol 295 (15) ◽  
pp. 4937-4949 ◽  
Author(s):  
Mingle Dou ◽  
Ying Yao ◽  
Lu Ma ◽  
Xiaoyu Wang ◽  
Xin'e Shi ◽  
...  
Keyword(s):  
Skeletal Muscle ◽  
Muscle Fiber ◽  
Long Noncoding Rna ◽  
Noncoding Rna ◽  
Skeletal Muscles ◽  
Fiber Type ◽  
Muscle Fiber Type ◽  
Fast Fiber ◽  
Slow Type ◽  
Myhc Expression

Mammalian skeletal muscles comprise different types of muscle fibers, and this muscle fiber heterogeneity is generally characterized by the expression of myosin heavy chain (MyHC) isoforms. A switch in MyHC expression leads to muscle fiber–type transition under various physiological and pathological conditions, but the underlying regulator coordinating the switch of MyHC expression remains largely unknown. Experiments reported in this study revealed the presence of a skeletal muscle–specific antisense transcript generated from the intergenic region between porcine MyHC IIa and IIx and is referred to here as MyHC IIA/X-AS. We found that MyHC IIA/X-AS is identified as a long noncoding RNA (lncRNA) that is strictly expressed in skeletal muscles and is predominantly distributed in the cytoplasm. Genetic analysis disclosed that MyHC IIA/X-AS stimulates cell cycle exit of skeletal satellite cells and their fusion into myotubes. Moreover, we observed that MyHC IIA/X-AS is more enriched in fast-twitch muscle and represses slow-type gene expression and thereby maintains the fast phenotype. Furthermore, we found that MyHC IIA/X-AS acts as a competing endogenous RNA that sponges microRNA-130b (miR-130b) and thereby maintains MyHC IIx expression and the fast fiber type. We also noted that miR-130b was proved to down-regulate MyHC IIx by directly targeting its 3′-UTR. Together, the results of our study uncovered a novel pathway, which revealed that lncRNA derived from the skeletal MyHC cluster could modulate local MyHC expression in trans, highlighting the role of lncRNAs in muscle fiber–type switching.

Muscle Fiber Types, Characteristics and Meat Quality

2013 ◽  
Vol 634-638 ◽  
pp. 1263-1267
Author(s):  
Lin Su ◽  
Hui Li ◽  
Xue Xin ◽  
Yan Duan ◽  
Xiao Qing Hua ◽  
...  
Keyword(s):  
Meat Quality ◽  
Muscle Fiber ◽  
Fiber Type ◽  
Influence Factors ◽  
Muscle Fiber Type ◽  
Basic Unit ◽  
Muscle Fiber Types ◽  
Fiber Types ◽  
Type Conversion ◽  
Fiber Type Distribution

Muscle fiber is the basic unit of muscle tissue, this paper summarized the types of muscle fiber of animals, the influence factors of muscle fiber type distribution and the muscle fiber type conversion in the process of growth constantly. Discuss the important effect of muscle fiber type on meat quality.

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