scholarly journals Mechanistic Morphogenesis of Organo-Sedimentary Structures Growing Under Geochemically Stressed Conditions: Keystone to Proving the Biogenicity of Some Archaean Stromatolites?

Geosciences ◽  
2019 ◽  
Vol 9 (8) ◽  
pp. 359 ◽  
Author(s):  
Keyron Hickman-Lewis ◽  
Pascale Gautret ◽  
Laurent Arbaret ◽  
Stéphanie Sorieul ◽  
Rutger De Wit ◽  
...  

Morphologically diverse organo-sedimentary structures (including microbial mats and stromatolites) provide a palaeobiological record through more than three billion years of Earth history. Since understanding much of the Archaean fossil record is contingent upon proving the biogenicity of such structures, mechanistic interpretations of well-preserved fossil microbialites can reinforce our understanding of their biogeochemistry and distinguish unambiguous biological characteristics in these structures, which represent some of the earliest records of life. Mechanistic morphogenetic understanding relies upon the analysis of geomicrobiological experiments. Herein, we report morphological-biogeochemical comparisons between micromorphologies observed in growth experiments using photosynthetic mats built by the cyanobacterium Coleofasciculus chthonoplastes (formerly Microcoleus) and green anoxygenic phototrophic Chloroflexus spp. (i.e., Coleofasciculus–Chloroflexus mats), and Precambrian organo-sedimentary structures, demonstrating parallels between them. In elevated ambient concentrations of Cu (toxic to Coleofasciculus), Coleofasciculus–Chloroflexus mats respond by forming centimetre-scale pinnacle-like structures (supra-lamina complexities) associated with large quantities of EPS at their surfaces. µPIXE mapping shows that Cu and other metals become concentrated within surficial sheath-EPS-Chloroflexus-rich layers, producing density-differential micromorphologies with distinct fabric orientations that are detectable using X-ray computed micro-tomography (X-ray µCT). Similar micromorphologies are also detectable in stromatolites from the 3.481 Ga Dresser Formation (Pilbara, Western Australia). The cause and response link between the presence of toxic elements (geochemical stress) and the development of multi-layered topographical complexities in organo-sedimentary structures may thus be considered an indicator of biogenicity, being an indisputably biological and predictable morphogenetic response reflecting, in this case, the differential responses of Coleofasciculus and Chloroflexus to Cu. Growth models for microbialite morphogenesis rely upon linking morphology to intrinsic (biological) and extrinsic (environmental) influences. Since the pinnacles of Coleofasciculus–Chloroflexus mats have an unambiguously biological origin linked to extrinsic geochemistry, we suggest that similar micromorphologies observed in ancient organo-sedimentary structures are indicative of biogenesis. An identical Coleofasciculus–Chloroflexus community subjected to salinity stress also produced supra-lamina complexities (tufts) but did not produce identifiable micromorphologies in three dimensions since salinity seems not to negatively impact either organism, and therefore cannot be used as a morphogenetic tool for the interpretation of density-homogeneous micro-tufted mats—for example, those of the 3.472 Ga Middle Marker horizon. Thus, although correlative microscopy is the keystone to confirming the biogenicity of certain Precambrian stromatolites, it remains crucial to separately interrogate each putative trace of ancient life, ideally using three-dimensional analyses, to determine, where possible, palaeoenvironmental influences on morphologies. Widespread volcanism and hydrothermal effusion into the early oceans likely concentrated toxic elements in early biomes. Morphological diversity in fossil microbialites could, therefore, reflect either (or both of) differential exposure to ambient fluids enriched in toxic elements and/or changing ecosystem structure and tolerance to elements through evolutionary time—for example, after incorporation into enzymes. Proof of biogenicity by deducing morphogenesis (i.e., a process preserved in the fossil record) overcomes many of the shortcomings inherent to the proof of biogenicity by descriptions of morphology alone.

2020 ◽  
pp. 1-21
Author(s):  
Rached Lakhdar ◽  
Mohamed Soussi ◽  
Rachida Talbi

Abstract On the southeastern Tunisian coastline, very diverse living microbial mats colonize the lower supratidal and intertidal zones, and locally may extend into the upper infratidal zone. The interaction between the benthic cyanobacteria and their siliciclastic substratum leads to the development of several types of microbially induced sedimentary structures (MISS). The mapping of the microbial mats has allowed the identification of the types of MISS that characterize the different segments of the coastal environment. The modern microbial mats have been compared with those recorded at the top of the Holocene deposits, which are composed of biodegraded microbial black mats alternating with white laminae made of clastic and evaporitic sediments, indicative of very high frequency cycles of flood and drought. A hypothetic profile showing their occurrences along the different areas bordering the coastline is proposed as a guide for the reconstruction of the ancient depositional environment. The roles of tidal dynamics, storms, and climate in controlling their genesis and spatial distribution, are discussed and highlighted. The modern MISS of southeastern Tunisia are compared with their equivalents that are well documented through the different geological eras.


2021 ◽  
Vol 4 (1) ◽  
pp. 001-014
Author(s):  
MATHIAS JASCHHOF

Twenty-four fossil gall midges (Cecidomyiidae) described from 1917–2020 from Mesozoic deposits, mostly ambers, are reviewed. Information from the original publications is used as the basis for reinterpretation, when such is regarded as appropriate here. As a result, the fossil record of cecidomyiids from the Mesozoic comprises representatives of the following subfamilies and tribes, all mycophagous (numbers in parentheses refer to species described): Catotrichinae (1); Micromyinae: Catochini (2), Amediini (1), Campylomyzini (1), Micromyini (2) and Aprionini (1); Winnertziinae: Heteropezini (2), Diallactiini (4) and Winnertziini (1); Porricondylinae: Dicerurini (1). Other Winnertziinae (3) and Micromyinae (5) cannot be classified to tribe because information on critical morphological structures is unavailable; they are thus considered incertae sedis. Members of the Lestremiinae sensu stricto are unrecorded from the Mesozoic, as are any Cecidomyiinae (the only subfamily containing phytophages and predators). Commonly occurring reasons for misinterpretation of amber fossils are the non-recognition of artefacts and the unfamiliarity with group-specific literature regarding prevailing taxonomic concepts and the morphological diversity found in Cecidomyiidae. These causes as well as obvious differences between neontological and paleontological taxonomic practices are discussed. Amediini trib. nov. Jaschhof, 2021 is introduced as a new tribe of the Micromyinae, to absorb the genera Amedia Jaschhof, 1997 (extant, North America, type genus), Amediella Jaschhof, 2003 (extant, New Zealand) and Eltxo Arillo & Nel, 2000 (extinct, Alava amber). A diagnosis of the new tribe is given. Krassiloviolini Fedotova & Perkovsky, 2017 is a new junior synonym of Heteropezini Schiner, 1868. Amediini Plakidas, 2017 and Zarqacecidomyius singularis Kaddumi, 2007 are nomina nuda.


2019 ◽  
Vol 336 ◽  
pp. 169-173 ◽  
Author(s):  
Amélie Rochet ◽  
Ana Flávia Suzana ◽  
Aline R. Passos ◽  
Tiago Kalile ◽  
Felisa Berenguer ◽  
...  

1999 ◽  
Vol 17 (2) ◽  
pp. 217-224 ◽  
Author(s):  
T.R. DITTRICH ◽  
S.W. HAAN ◽  
M.M. MARINAK ◽  
D.E. HINKEL ◽  
S.M. POLLAINE ◽  
...  

Several choices exist in the design and production of capsules intended to ignite and propagate fusion burn of the deuterium–tritium (D–T) fuel when imploded by indirect drive at the National Ignition Facility (NIF). These choices include ablator material, ablator dopant concentration and distribution, capsule dimensions, and X-ray drive profile (shock timings and strengths). The choice of ablator material must also include fabrication and material characteristics, such as attainable surface finishes, permeability, strength, transparency to radio frequency and infrared radiation, thermal conductivity, and material homogeneity. Understanding the advantages and/or limitations of these choices is an ongoing effort for LLNL and LANL designers. At this time, simulations in one-, two-, and three-dimensions show that capsules with either a copper-doped beryllium or a polyimide (C22H10N2O4) ablator material have both the least sensitivity to initial surface roughnesses and favorable fabrication qualities. Simulations also indicate the existence of capsule designs based on these ablator materials which ignite and burn when imploded by less than nominal laser performance (900-kJ energy, 250-TW power, producing 250-eV peak radiation temperature). We will describe and compare these reduced-scale capsules, in addition to several designs which use the expected 300-eV peak X-ray drive obtained from operating the NIF laser at 1.3 MJ and 500 TW.


Minerals ◽  
2020 ◽  
Vol 10 (9) ◽  
pp. 819
Author(s):  
Pura Alfonso ◽  
Oriol Tomasa ◽  
Luis Miguel Domenech ◽  
Maite Garcia-Valles ◽  
Salvador Martinez ◽  
...  

Tailings from the Osor fluorite mines release large amounts of potentially toxic elements into the environment. This work is a proposal to remove these waste materials and use them as a raw material in the manufacture of glass. The chemical composition of the tailings was determined by X-ray fluorescence and the mineralogy by X-ray diffraction. Waste materials have SiO2, Al2O3 and CaO contents suitable for a glass production, but Na as NaCO3 has to be added. Two glass formulations, with 80–90% of the residue and 10–20% Na2CO3, have been produced. The crystallization temperatures, obtained by differential thermal analysis, were 875 and 901 °C, and the melting temperatures were 1220 and 1215 °C for the G80-20 and G90-10 glasses, respectively. The transition temperatures of glass were 637 and 628 °C. The crystalline phases formed in the thermal treatment to produce devitrification were nepheline, plagioclase and diopside in the G80-20 glass, and plagioclase and akermanite-gehlenite in the G90-10 glass. The temperatures for the fixed viscosity points, the working temperatures and the coefficient of expansion were obtained. The chemical stability of the glass was tested and results indicate that the potentially toxic elements of the tailings were incorporated into the glass structure.


2010 ◽  
Vol 43 (4) ◽  
pp. 929-936 ◽  
Author(s):  
David Babonneau

A software package for performing modelling and analysis of GISAXS (grazing-incidence small-angle X-ray scattering) data within the distorted-wave Born approximation has been developed using the IGOR Pro scripting language (http://www.wavemetrics.com). The tool suite uses a slab-model approach with the Abélès matrix method to calculate X-ray reflectivity curves, electric field intensity distributions and GISAXS intensities from supported or buried scatterers arranged in two or three dimensions in a stratified medium. Models are included to calculate the scattered intensity for monodisperse, polydisperse and interacting particles with various size distributions, form factors and structure factors. The source code for the entire package is freely available, allowing anyone to develop additional tools.


2016 ◽  
Vol 72 (2) ◽  
pp. 215-221 ◽  
Author(s):  
Aike Ruhlandt ◽  
Tim Salditt

This paper presents an extension of phase retrieval algorithms for near-field X-ray (propagation) imaging to three dimensions, enhancing the quality of the reconstruction by exploiting previously unused three-dimensional consistency constraints. The approach is based on a novel three-dimensional propagator and is derived for the case of optically weak objects. It can be easily implemented in current phase retrieval architectures, is computationally efficient and reduces the need for restrictive prior assumptions, resulting in superior reconstruction quality.


2011 ◽  
Vol 44 (3) ◽  
pp. 526-531 ◽  
Author(s):  
David Allen ◽  
Jochen Wittge ◽  
Jennifer Stopford ◽  
Andreas Danilewsky ◽  
Patrick McNally

In the semiconductor industry, wafer handling introduces micro-cracks at the wafer edge and the causal relationship of these cracks to wafer breakage is a difficult task. By way of understanding the wafer breakage process, a series of nano-indents were introduced both into 20 × 20 mm (100) wafer pieces and into whole wafers as a means of introducing controlled strain. Visualization of the three-dimensional structure of crystal defects has been demonstrated. The silicon samples were then treated by various thermal anneal processes to initiate the formation of dislocation loops around the indents. This article reports the three-dimensional X-ray diffraction imaging and visualization of the structure of these dislocations. A series of X-ray section topographs of both the indents and the dislocation loops were taken at the ANKA Synchrotron, Karlsruhe, Germany. The topographs were recorded on a CCD system combined with a high-resolution scintillator crystal and were measured by repeated cycles of exposure and sample translation along a direction perpendicular to the beam. The resulting images were then rendered into three dimensions utilizing open-source three-dimensional medical tomography algorithms that show the dislocation loops formed. Furthermore this technique allows for the production of a video (avi) file showing the rotation of the rendered topographs around any defined axis. The software also has the capability of splitting the image along a segmentation line and viewing the internal structure of the strain fields.


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