scholarly journals Pseudocochlodinium profundisulcus Resting Cysts Detected in the Ballast Tank Sediment of Ships Arriving in the Ports of China and North America and the Implications in the Species’ Geographic Distribution and Possible Invasion

Author(s):  
Lixia Shang ◽  
Xinyu Zhai ◽  
Wen Tian ◽  
Yuyang Liu ◽  
Yangchun Han ◽  
...  

Over the past several decades, much attention has been focused on the dispersal of aquatic nonindigenous species via ballast tanks of shipping vessels worldwide. The recently reclassified dinoflagellate Pseudocochlodinium profundisulcus (previously identified as Cochlodinium sp., Cochlodinium geminatum, or Polykrikos geminatus) was not reported in China until 2006. However, algal blooming events caused by this organism have been reported almost every year since then in the Pearl River Estuary and its adjacent areas in China. Whether P. profundisulcus is an indigenous or an invasive species has thus become an ecological question of great scientific and practical significance. In this study, we collected the sediments from ballast tanks of ships arriving in the ports of China and North America and characterized dinoflagellate resting cysts via a combined approach. We germinated two dark brownish cysts from the tank of an international ship (Vessel A) arriving at the Jiangyin Port (China) into vegetative cells and identified them as P. profundisulcus by light and scanning electron microscopy and phylogenetic analyses for partial LSU rDNA sequences. We also identified P. profundisulcus cyst from the ballast tank sediment of a ship (Vessel B) arriving in the port of North America via single-cyst PCR and cloning sequencing, which indicated that this species could be transported as resting cyst via ship. Since phylogenetic analyses based on partial LSU rDNA sequences could not differentiate all sequences among our cysts from those deposited in the NCBI database into sub-groups, all populations from China, Australia, Japan, and the original sources from which the cysts in the two vessels arrived in China and North America were carried over appeared to share a very recent common ancestor, and the species may have experienced a worldwide expansion recently. These results indicate that P. profundisulcus cysts may have been extensively transferred to many regions of the world via ships’ ballast tank sediments. While our work provides an exemplary case for both the feasibility and complexity (in tracking the source) of the bio-invasion risk via the transport of live resting cysts by ship’s ballast tanks, it also points out an orientation for future investigation.

Nematology ◽  
2019 ◽  
Vol 21 (1) ◽  
pp. 45-56 ◽  
Author(s):  
Farzad Aliramaji ◽  
Esmaeil Miraeiz ◽  
Ebrahim Pourjam ◽  
Ramin Heydari

Summary Cryptaphelenchus baujardi n. sp. is described and illustrated based on two populations from Golestan province, northern Iran. The new species is characterised by female and male body length of 224 (190-261) and 215 (195-229) μm, respectively, offset cephalic region with a shallow constriction, delicate stylet 6.6 (6.0-7.0) μm long, four incisures in the lateral field, presence of a rudimentary post-uterine sac in the female gonoduct, elongate-conoid female tail ending in an acute to finely rounded terminus, male tail conical, male with seven caudal papillae and delicate spicules. The new species shows a strong resemblance to C. varicaudatus and C. iranicus, but has a sclerotised mass near the tip of the spicule and an indistinct spermatheca. Phylogenetic analyses based on both partial SSU and LSU rDNA sequences confirm its status as a new taxon.


Parasitology ◽  
2008 ◽  
Vol 135 (14) ◽  
pp. 1667-1678 ◽  
Author(s):  
J. WOLINSKA ◽  
K. C. KING ◽  
F. VIGNEUX ◽  
C. M. LIVELY

SUMMARYWe describe the infectivity, virulence, cultivating conditions, and phylogenetic positions of naturally occurring oomycete parasites of Daphnia, invertebrates which play a major role in aquatic food webs. Daphnia pulex individuals were found dead and covered by oomycete mycelia when exposed to pond sediments. We were able to extract 4 oomycete isolates from dead Daphnia and successfully cultivate them. Using the ITS and LSU rDNA sequences, we further showed these isolates to be distinct species. The isolates were experimentally demonstrated to be parasitic and not saprobic. After exposure to the parasites, Daphnia mortality was much higher than that reported for Daphnia infected with other known parasite species. Therefore, it is likely that oomycete parasites are important selective pressures in natural Daphnia populations. Moreover, their close phylogenetic relationship to parasites of fish and algae suggests that the stability of aquatic food webs (i.e. fish–Daphnia–algae) might be influenced by the shared parasite communities.


2020 ◽  
Vol 21 (3) ◽  
pp. 759
Author(s):  
JASNA ARAPOV ◽  
MIA BUŽANČIĆ ◽  
ANTONELLA PENNA ◽  
SILVIA CASABIANCA ◽  
SAMUELA CAPELLACCI ◽  
...  

The aim of the present study isto characterise the diatom Pseudo-nitzschia community during a bloom period together with environmental conditions. High proliferation of Pseudo-nitzschia spp. was observed in September 2017 at the shellfish breeding area in the Krka River estuary (Central eastern Adriatic Sea). The peak of abundance (1.8 x 106 cells L-1) was recorded at 7 m depth, and the increased abundance persisted for four weeks.Morphological analyses of field samples based on scanning electron microscopy (SEM) revealed that Pseudo-nitzschia cf. arenysensis was prevailing (94%) in the Pseudo-nitzschia assemblage. Several strains were successfully isolated from net samples in order to better define morphological features and phylogenetic characterisation. The isolated Pseudo-nitzschia strains corresponded morphologically to the P. cf. arenysensis from the field samples, based on our SEM observations. Phylogenetic analysis demonstrated that the Croatian strains grouped with P. arenysensis using the ITS and LSU rDNA sequences. Spearman rank correlation showed that salinity was an important environmental factor affecting the vertical distribution of Pseudo-nitzschia spp. in this highly variable area. Availability of increased concentration of orthophosphates and ammonium and low Si: TIN ratio may have promoted the bloom of P. cf. arenysensis in the estuary.


Parasitology ◽  
2010 ◽  
Vol 137 (13) ◽  
pp. 1885-1898 ◽  
Author(s):  
R. J. GLEESON ◽  
M. B. BENNETT ◽  
R. D. ADLARD

SUMMARYMyxosporean parasites are significant parasites of fishes not only for their apparent high diversity but also for their potential impact on fish health and/or marketability. Regardless, our knowledge of most myxosporeans, especially those found in elasmobranch hosts, is superficial. A study of multivalvulidan diversity in a range of elasmobranchs from Queensland, Western Australia and the Northern Territory (Australia) was conducted to address this knowledge gap. Specimens were collected from a total of 3 orders, 9 families and 31 species of elasmobranchs. Myxosporean infections referable to the genus Kudoa were discovered in host muscle and characterized morphologically and genetically. Both small subunit (SSU) and large subunit (LSU) rDNA sequences were used in molecular phylogenetic analyses. Kudoa spp. infected 27 of the 31 species of elasmobranchs examined, representing new records of this parasite genus in 26, of the 27, host species. Kudoids were observed in all 3 orders, and 7 out of the 9 families of elasmobranchs investigated. This paper reports the first 2 multivalvulidan species to be formally described from elasmobranchs, Kudoa hemiscylli n.sp. characterized from Hemiscyllium ocellatum (and 8 other host species) and Kudoa carcharhini n. sp. characterized from Carcharhinus cautus (and 2 other host species). Phylogenetic analyses revealed that kudoids from elasmobranchs form a separate lineage to those of teleosts, but are anchored within the overall kudoid clade.


Phytotaxa ◽  
2014 ◽  
Vol 176 (1) ◽  
pp. 156 ◽  
Author(s):  
NALIN N. WIJAYAWARDENE ◽  
KEVIN D. HYDE ◽  
ERIO CAMPORESI ◽  
D. JAYARAMA BHAT ◽  
YU SONG ◽  
...  

A new species Homortomyces tamaricis is introduced from Cervia, Italy. It is distinct from H. combreti, the type species of this monotypic genus, in having smaller conidia, smaller paraphyses and shorter supporting cells. Morphologically Homortomyces is similar to Stilbospora, which groups in Diaporthales incertae sedis in maximum-likelihood analysis of LSU rDNA sequences. Maximum-likelihood analysis of the combined data set of LSU and ITS rDNA sequences indicates that Homortomyces species cluster with Tubeufiaceae with 77% bootstrap support, but group as a distinct clade with high bootstrap value (100%). These two genera show convergent evolution since both share very similar morphological characters, but have distinct phylogenetic lineages. Further phylogenetic analyses are needed, when more strains of Homortomyces and related genera are available, to resolve the genus familial placement. We maintain the genus in Dothideomycetes incertae sedis. No sexual state has yet been reported for this genus.


2021 ◽  
Vol 7 (7) ◽  
pp. 513
Author(s):  
Thuong T.T. Nguyen ◽  
Kerstin Voigt ◽  
André Luiz Cabral Monteiro de Azevedo Santiago ◽  
Paul M. Kirk ◽  
Hyang-Burm Lee

Three novel fungal species, Backusella chlamydospora sp. nov., B. koreana sp. nov., and B. thermophila sp. nov., as well as two new records, B. oblongielliptica and B. oblongispora, were found in Cheongyang, Korea, during an investigation of fungal species from invertebrates and toads. All species are described here using morphological characters and sequence data from internal transcribed spacer sequences of ribosomal DNA and large subunit of the ribosomal DNA. Backusella chlamydospora is different from other Backusella species by producing chlamydospores. Backusella koreana can be distinguished from other Backusella species by producing abundant yeast-like cells. Backusella thermophila is characterized by a variable (subglobose to oblong, applanate to oval, conical and ellipsoidal to pyriform) columellae and grows well at 37 °C. Multigene phylogenetic analyses of the combined ITS and LSU rDNA sequences data generated from maximum likelihood and MrBayes analyses indicate that B. chlamydospora, B. koreana, and B. thermophila form distinct lineages in the family Backusellaceae. Detailed descriptions, illustrations, phylogenetic tree, and taxonomic key to the Backusella species present in Korea are provided.


Phytotaxa ◽  
2017 ◽  
Vol 311 (2) ◽  
pp. 155 ◽  
Author(s):  
NATALY GÓMEZ-MONTOYA ◽  
ELISANDRO RICARDO DRECHSLER-SANTOS ◽  
VALÉRIA FERREIRA-LOPES ◽  
MICHAL TOMŠOVSKÝ ◽  
CARLOS URCELAY ◽  
...  

Based on molecular evidence and morphological analyses, a new species in the genus Trametopsis is revealed. Trametopsis aborigena sp. nov. is proposed and described from South America. Molecular phylogenetic analyses of ITS and LSU rDNA sequences suggest that Trametopsis cervina seems to encompass more than one species and confirm previous results showing that Antrodiella brasiliensis groups with Trametopsis. The morphological analyses of type specimens of A. brasiliensis and A. luteocontexta revealed a shared morphological pattern with Trametopsis and their combinations in Trametopsis are proposed. The circumscription of Trametopsis is discussed since all the studied specimens revealed a previously overlooked arrangement of characters, i.e., cylindrical and slightly curved to allantoid basidiospores and a metachromatic hyphal system monomitic in the context and dimitic in the tubes.


2020 ◽  
Author(s):  
Rui Wang ◽  
Yang Bai ◽  
Tao Hu ◽  
Dapeng Xu ◽  
Toshikazu Suzuki ◽  
...  

Abstract Background: The taxonomic classification of the suborder Tintinnina Kofoid & Campbell, 1929, a species-rich group of planktonic ciliated protozoans with characteristic lorica, is very ambiguous for a long time largely due to the lack of cytological and molecular data for most species. Among the group, Tintinnopsis is the largest, most widespread, and most taxonomically complex genus with about 170 species occurring in nearshore waters. The highly polyphyletic status of this speciose genus has also been revealed by previous researches.Results: We here first documented the live morphology, infraciliature, and molecular data, as well habitat characteristics of three poorly known tintinnine species, viz. Tintinnopsis karajacensis Brandt, 1896, Tintinnopsis gracilis Kofoid & Campbell, 1929, and Tintinnopsis tocantinensis Kofoid & Campbell, 1929, isolated from the coastal waters of China. Based on revelation of the unique cytological feature (the elongated ciliary tuft with densely arranged kinetids in it) in the former two species, which is apparently different from all other Tintinnopsis forms, Antetintinnopsis gen. nov. is thus erected with T. karajacensis designated as the type species. Moreover, these two species are placed in a highly supported clade, which branches away from other Tintinnopsis (including type species, T. beroidea) clades, in the phylogenetic analyses based on SSU rDNA and LSU rDNA sequences, which thus justifies the establishment of the new genus. Meanwhile, two other new combinations were made for Tintinnopsis hemispiralis and T. subacuta.Conclusions: The molecular data adopted here resulted in a well-resolved phylogenetic inference that provided strong evidence that the cytological characters are of valuable taxonomic delimitation for Tintinnina. This study also contributes to the broadening of our understanding of the tintinnine biodiversity and evolution.


Nematology ◽  
2018 ◽  
Vol 20 (1) ◽  
pp. 81-95 ◽  
Author(s):  
Daniel Leduc ◽  
Frederic Sinniger

Because of their relatively simple body plan, the number of morphological characters used to differentiate between closely related nematode genera is often limited. In addition, boundaries among genera sometimes become blurred due to the appearance of new trait combinations as more new species are described. Molecular phylogenetic analyses can address the shortcomings of morphological taxonomy by clarifying relationships among closely related species and genera and can help identify which morphological characters are taxonomically informative. Here, we describeLaxus sakihariiaesp. n. from shallow subtidal sands on Sesoko Island in the Okinawa prefecture, investigate phylogenetic relationships with other stilbonematine species and genera based on SSU rDNA sequences, and provide the first LSU rDNA sequence for the subfamily. The new species can be easily distinguished from all other species of the genus by the presence in the male of subventral and ventral rows of stout and spine-like setae in the pre- and postcloacal regions. This feature suggests affinities with the closely related genusLeptonemella, although the SSU consensus tree clearly shows that the new species forms a monophyletic clade together with the otherLaxusspecies for which sequences are available. The structure of the cephalic capsule inL. sakihariiaesp. n., which consists of a block layer between the median and basal zones of the cephalic cuticle, is consistent with the placement of this species. This trait is not currently used as a diagnostic feature, but our finding suggests that the structure of the cephalic capsule may be taxonomically useful for differentiating between some stilbonematine genera.


Phytotaxa ◽  
2016 ◽  
Vol 260 (1) ◽  
pp. 66 ◽  
Author(s):  
MOHAMED A. ABDEL-WAHAB ◽  
ALI H. BAHKALI ◽  
E. B. GARETH JONES ◽  
ABDALLAH M. ELGORBAN ◽  
FATEN A. ABDEL-AZIZ ◽  
...  

During an ongoing study of marine fungi in Saudi Arabia, two undescribed Kallichroma species were recorded from decayed intertidal wood of Avicennia marina from two mangrove stands along the Red Sea coast and the Arabian Gulf coast in Saudi Arabia. Kallichroma asperum sp. nov. is characterized by rough ascospores cell walls surrounded by a granular sheath. Kallichroma ellipsoideum sp. nov. is characterized by its small sized hyaline ascomata, asci and ascospores. Both new species have 3 or 8-spored asci and perithecoid or confluent ascomata with large, globose papillae. Phylogenetic analyses of the combined SSU and LSU rDNA sequences placed the two new species in the family Bionectriaceae.


Sign in / Sign up

Export Citation Format

Share Document