scholarly journals Overview of the Genetic Diversity of African Macrotermes (Termitidae: Macrotermitinae) and Implications for Taxonomy, Ecology and Food Science

Insects ◽  
2021 ◽  
Vol 12 (6) ◽  
pp. 518
Author(s):  
Bronwyn Egan ◽  
Zwannda Nethavhani ◽  
Barbara van Asch
Keyword(s):  
Negative Impact ◽  
Phylogenetic Reconstruction ◽  
Morphological Characters ◽  
Food Science ◽  
Cryptic Diversity ◽  
African Species ◽  
Genetic Groups ◽  
Wide Range ◽  
Coi Sequences ◽  
High Level

Macrotermes termites play important ecological roles and are consumed by many communities as a delicacy and dietary complement throughout Africa. However, lack of reliable morphological characters has hampered studies of Macrotermes diversity in a wide range of scientific fields including ecology, phylogenetics and food science. In order to place our preliminary assessment of the diversity of Macrotermes in South Africa in context, we analysed a comprehensive dataset of COI sequences for African species including new and publicly available data. Phylogenetic reconstruction and estimates of genetic divergence showed a high level of incongruity between species names and genetic groups, as well as several instances of cryptic diversity. We identified three main clades and 17 genetic groups in the dataset. We propose that this structure be used as a background for future surveys of Macrotermes diversity in Africa, thus mitigating the negative impact of the present taxonomic uncertainties in the genus. The new specimens collected in Limpopo fell into four distinct genetic groups, suggesting that the region harbours remarkable Macrotermes diversity relative to other African regions surveyed in previous studies. This work shows that African Macrotermes have been understudied across the continent, and that the genus contains cryptic diversity undetectable by classic taxonomy. Furthermore, these results may inform future taxonomic revisions in Macrotermes, thus contributing to advances in termitology.

scholarly journals Treatment patterns and appropriateness of antipsychotic prescriptions in patients with schizophrenia

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Verónica Gamón ◽  
Isabel Hurtado ◽  
José Salazar-Fraile ◽  
Gabriel Sanfélix-Gimeno
Keyword(s):  
Negative Impact ◽  
Current Treatment ◽  
Treatment Patterns ◽  
Mental Condition ◽  
Comorbid Condition ◽  
Concomitant Treatment ◽  
Antipsychotic Medications ◽  
Wide Range ◽  
Schizophrenic Patients ◽  
High Level

AbstractSchizophrenia is a chronic mental condition presenting a wide range of symptoms. Although it has a low prevalence compared to other mental conditions, it has a negative impact on social and occupational functions. This study aimed to assess the appropriateness of antipsychotic medications administered to schizophrenic patients and describe current treatment patterns for schizophrenia. A retrospective cohort study was conducted in all patients over the age of 15 with an active diagnosis of schizophrenia and treated with antipsychotics between 2008 and 2013 in the Valencia region. A total of 19,718 patients were eligible for inclusion. The main outcome assessed was inappropriateness of the pharmacotherapeutic management, including polypharmacy use. Altogether, 30.4% of patients received antipsychotic polypharmacy, and 6.8% were prescribed three or more antipsychotics. Overdosage affected 318 individuals (1.6%), and 21.5% used concomitant psychotropics without an associated psychiatric diagnosis. Women and people with a comorbid condition like anxiety or depression were less likely to receive antipsychotic polypharmacy. In contrast, increased polypharmacy was associated with concomitant treatment with other psychoactive drugs, and only in user on maintenance therapy, with more visits to the mental health hospital. Overall, we observed a high level of inappropriateness in antipsychotic prescriptions. Greater adherence to guidelines could maximize the benefits of antipsychotic medications while minimizing risk of adverse effects.

scholarly journals Systematic Evaluation of Landrace Tea Populations in Northern Sichuan, China, Based on Morphology, DNA Markers, and Biochemistry Analyses

HortScience ◽  
2018 ◽  
Vol 53 (8) ◽  
pp. 1095-1101
Author(s):  
Li-Qiang Tan ◽  
Xin-Yu Wang ◽  
Hui Li ◽  
Guan-Qun Liu ◽  
Yao Zou ◽  
...  
Keyword(s):  
Dna Markers ◽  
Gene Diversity ◽  
Germplasm Conservation ◽  
Dry Weight ◽  
Morphological Characters ◽  
Systematic Evaluation ◽  
Total Amino Acid ◽  
Wide Range ◽  
High Level ◽  
Selection Of

Landrace tea populations are important recourses for germplasm conservation and selection of elite tea clone cultivars. To understand their genetic diversity and use them effectively for breeding, two traditional landrace tea populations, Beichuan Taizicha (BCTZ) and Nanjiang Dayecha (NJDY), localized to northern Sichuan, were evaluated for morphological characters, simple sequence repeat (SSR)–based DNA markers and the contents of biochemical components. A wide range of morphological variation and a moderately high level of DNA polymorphism were observed from both BCTZ and NJDY. NJDY had on average, bigger leaves, larger flowers, higher total catechins (TCs), and greater gene diversity (GD) than BCTZ. Interestingly, samples from BCTZ had a wide range in the ratio of galloylated catechins to nongalloylated catechins (G/NG) (1.83–8.12, cv = 48.8%), whereas samples from NJDY were more variable in total amino acid (TAA) content (25.3–50.8 mg·g−1 dry weight) than those from BCTZ. We concluded that the two Camellia sinensis landrace populations are of great interest for both individual selection breeding and scientific studies.

Phylogeny and evolution of calcareous sponges

2006 ◽  
Vol 84 (2) ◽  
pp. 225-241 ◽  
Author(s):  
M Manuel
Keyword(s):  
Molecular Phylogeny ◽  
Phylogenetic Reconstruction ◽  
Cladistic Analysis ◽  
Morphological Characters ◽  
Calcareous Sponges ◽  
Rdna Sequences ◽  
Phylogenetic Hypotheses ◽  
Phylogeny And Evolution ◽  
High Level ◽  
The 19Th Century

The most recent advances concerning the phylogeny and evolution of calcareous sponges (Calcarea or Calcispongia) are reviewed here, in the light of the history of taxonomy of the group and conceptions about its evolution, starting from Haeckel's works at the end of the 19th century. Calcisponge phylogeny has recently started to be addressed using modern tools of phylogenetic reconstruction: cladistic analysis of morphological characters and molecular phylogeny (so far using 18S and 28S rDNA sequences). The monophyly of calcareous sponges is strongly supported in these works, as is their subdivision into two clades, Calcinea (whose proposed synapomorphy is the basal position of nuclei in choanocytes, with no relation to the flagella) and Calcaronea (whose possible synapomorphy is the formation of the amphiblastula larva through the original process of eversion of the stomoblastula). While the molecular phylogeny of Calcinea is still in its infancy because of insufficient taxonomic sampling, several lines are emerging for the phylogeny of Calcaronea, and these are in strong disagreement with the classification issued from the "traditional" morphological approach. Phylogenetic hypotheses also permit the reconstruction of morphological character evolution, which appears complex and subject to a high level of homoplasy.

scholarly journals Neogene paleogeography provides context for understanding the origin and spatial distribution of cryptic diversity in a widespread Balkan freshwater amphipod

2017 ◽  
Author(s):  
Michał Grabowski ◽  
Tomasz Mamos ◽  
Karolina Bącela-Spychalska ◽  
Tomasz Rewicz ◽  
Remi A Wattier
Keyword(s):  
Evolutionary History ◽  
28S Rdna ◽  
Cryptic Diversity ◽  
The Balkans ◽  
Operational Taxonomic Units ◽  
Freshwater Biota ◽  
History Of ◽  
Riverine Habitats ◽  
Coi Sequences ◽  
High Level

Background. The Balkans are a major biodiversity and endemism hotspot, worldwide. Among the freshwater biota, amphipods are known for their high cryptic diversity. However, little is known about the temporal and paleogeographic aspects of their evolutionary history. We used paleogeography as a framework for understanding the onset of diversification in Gammarus roeselii: 1) we hypothesised that, given the high number of isolated waterbodies in the Balkans, the species is characterised by high level of cryptic diversity, even on a local scale; 2) the long geological history of the region might promote pre-Pleistocene divergence between lineages; 3) given that G. roeselii thrives both in lakes and rivers, its evolutionary history could be linked to the Balkan Neogene paleolake system; 4) we inspected whether the Pleistocene decline of hydrological networks could have any impact on the diversification of G. roeselii. Material and Methods. DNA was extracted from 136 individuals collected from 26 sites all over Balkans. All individuals were amplified for ca. 650 bp long fragment of the mtDNA cytochrome oxidase subunit I (COI). After defining molecular operational taxonomic units (MOTU) based on COI, 50 individuals were amplified for ca. 900 bp long fragment of the nuclear 28S rDNA. Molecular diversity, divergence, differentiation and historical demography based on COI sequences were estimated for each MOTU. The relative frequency, geographic distribution and molecular divergence between COI haplotypes were presented as a median-joining network. COI was used also to reconstruct time-calibrated phylogeny with Bayesian inference. Probabilities of ancestors' occurrence in riverine or lacustrine habitats, as well their possible geographic locations, were estimated with the Bayesian method. A Neighbour Joining tree was constructed to illustrate the phylogenetic relationships between 28S rDNA haplotypes. Results. We revealed that G. roeselii includes at least 13 cryptic species or molecular operational taxonomic units (MOTUs), mostly of Miocene origin. A substantial Pleistocene diversification within-MOTUs was observed in several cases. We evidenced secondary contacts between very divergent MOTUs and introgression of nDNA. The Miocene ancestors could live in either lacustrine or riverine habitats yet their presumed geographic localisations overlapped with those of the Neogene lakes. Several extant riverine populations had Pleistocene lacustrine ancestors. Discussion. Neogene divergence of lineages resulting in substantial cryptic diversity may be a common phenomenon in extant freshwater benthic crustaceans occupying areas that were not glaciated during the Pleistocene. Evolution of G. roeselii could be associated with gradual deterioration of the paleolakes. The within-MOTU diversification might be driven by fragmentation of river systems during the Pleistocene. Extant ancient lakes could serve as local microrefugia during that time.

Molecular phylogeny of genus Musa determined by simple sequence repeat markers

2015 ◽  
Vol 14 (3) ◽  
pp. 192-199 ◽  
Author(s):  
Huimin Feng ◽  
You Chen ◽  
Bo Li ◽  
Yaoting Wu
Keyword(s):  
Simple Sequence Repeat ◽  
Polymorphic Information Content ◽  
Phylogenetic Analyses ◽  
Morphological Characters ◽  
Molecular Data ◽  
Sequence Repeat ◽  
Wide Range ◽  
Molecular Marker Analysis ◽  
High Level ◽  
Simple Sequence

Musa L. was previously separated into five sections (Eumusa, Rhodochlamys, Callimusa, Australimusa and Ingentimusa) based on basic chromosome numbers and morphological characters. However, several molecular analyses currently support restructuring of Musa species into two sections, Musa and Callimusa. The application of simple sequence repeat molecular marker analysis to Musa phylogeny provided valuable, supplemental information about the classification of, and relationships between, Musa species and subspecies. Totally, 28 accessions of Musa acuminata Colla subspecies and varieties and 25 accessions of other Musa species were evaluated; 12 primers produced 91 polymorphic bands, polymorphic information content ranged from 0.4473 to 0.8394 (average = 0.7226), indicating that the primers showed a high level of polymorphism. Our results generally agreed with previous phylogenetic analyses based on molecular data. One clade comprised species of sections Australimusa and Callimusa (X= 10/9); most species of sections Eumusa and Rhodochlamys (X= 11) formed the other clade. The relationships between most species were as expected; however, some species did not conform to findings of previous studies. A wide range of variability was observed in the M. acuminata complex. M. acuminata var. chinensis and M. acuminata subsp. 522 showed the most distant relationships to other subspecies: Musa laterita, Musa ornata and Musa velutina clustered with M. acuminata var. chinensis, suggesting that they may constitute a secondary gene pool for the improvement of cultivated bananas. Molecular data indicated that Musa tongbiguanensis Chen You & Yao-Ting Wu, which was observed and described by our research group in Yunnan, China, was a distinct, new species.

scholarly journals Treatment Patterns and Appropriateness of Antipsychotic Prescriptions in Patients with Schizophrenia

2021 ◽  
Author(s):  
Verónica Gamón ◽  
Isabel Hurtado ◽  
José Salazar-Fraile ◽  
Gabriel Sanfélix-Gimeno
Keyword(s):  
Antipsychotic Medication ◽  
Negative Impact ◽  
Mental Condition ◽  
Comorbid Condition ◽  
Concomitant Treatment ◽  
Maximum Benefit ◽  
Increased Risk ◽  
Wide Range ◽  
Schizophrenic Patients ◽  
High Level

Abstract Schizophrenia is a chronic mental condition presenting a wide range of symptoms. Although this mental disorder has a low prevalence in comparison to other mental conditions, it has a negative impact on social and occupational functioning. This study is aimed to assess the inappropriateness of antipsychotic medication among schizophrenic patients and describe current patterns in the treatment of schizophrenia. A retrospective cohort study was conducted including all patients over the age of 15 with an active diagnosis of schizophrenia and treated with antipsychotics between 2008 and 2013 in the Valencia region. 19,718 patients with a diagnosis of schizophrenia and treated with antipsychotic medication were identified. The main outcome was inappropriateness of the pharmacotherapeutic management, including polypharmacy use: 30.4% of patients received antipsychotic polypharmacy (6.8% were prescribed 3 or more antipsychotics); overdosage: a total of 318 individuals (1.6%) exceeded the maximum daily doses; and use of concomitant psychotropics without an associated diagnosis: 21.5% of patients received psychotropic drugs concomitantly without associated psychiatric diagnoses. Overall, females and those who had a comorbid condition, such as anxiety or depression, were less likely to receive antipsychotic polypharmacy. In contrast, concomitant treatment with other psychoactive drugs, such as antiparkinson drugs, anxiolytics and hypnotics and more visits to mental health hospital increased the risk of polypharmacy use. In conclusion, a high level of inappropriateness has been detected among antipsychotic prescriptions. Practitioners should follow guidelines recommendations whenever possible in order to obtain the maximum benefit of antipsychotic medications without an increased risk of adverse effects in patients.

scholarly journals New records and an updated checklist of snakes from Son La Province, Vietnam

2020 ◽  
Vol 8 ◽  
Author(s):  
Anh Pham ◽  
Thomas Ziegler ◽  
Truong Nguyen
Keyword(s):  
Morphological Characters ◽  
Iucn Red List ◽  
Large Area ◽  
Natural Habitats ◽  
Species Of Conservation Concern ◽  
Wide Range ◽  
Data Book ◽  
Conservation Concern ◽  
High Level ◽  
First Time

Son La Province is located in north-western Vietnam and the province contains a large area of 440,000 hectares of natural forest. A wide range of elevations and the complexity of landforms have given this province a great diversity of natural habitats and a high level of biodiversity potential. However, the snake fauna of Son La province is still poorly studied. Previous studies documented 56 species of snakes from this province. As a result of our field surveys in Phu Yen, Song Ma, Thuan Chau and Van Ho districts, we report five species of snakes for the first time from Son La Province, northern Vietnam, namely Boiga cyanea, B. guangxiensis, Lycodon meridionalis (Colubridae), Protobothrops cornutus and P. mucrosquamatus (Viperidae), with novel data about morphological characters. In addition, we provide an updated checklist of 61 snake species from Son La Province. The snake fauna of Son La Province also contains a number of species of conservation concern: 11 species listed in the Red Data Book of Vietnam (2007), four species listed in the IUCN Red List (2020) and four species listed in the Vietnam Governmental Decree No. 06 (2019).

scholarly journals Morphological and molecular studies of three species of Boerhavia L. from Ile-Ife, Nigeria

2020 ◽  
Vol 22 (2) ◽  
pp. 225-236
Author(s):  
S.O. Azeez ◽  
J.O. Matthew ◽  
E.A. Olaoluwa ◽  
G.B. Adegboyega ◽  
I.O. Akinyoola
Keyword(s):  
Cluster Analysis ◽  
Phylogenetic Relationship ◽  
Random Amplified Polymorphic Dna ◽  
Rapd Marker ◽  
Pollen Grains ◽  
Morphological Characters ◽  
Morphological Data ◽  
Group Method ◽  
Wide Range ◽  
High Level

A wide range of plasticity and polymorphism have been documented in the genus Boerhavia. More so, the possible presence of natural hybrids  among the species of the genus has made species identification more difficult. This study employed morphological characters, pollen parameters as well as Random Amplified Polymorphic DNA (RAPD) to identify and elucidate the phylogenetic relationship that exists among the three species of Boerhavia distributed in Ile-Ife, Nigeria. Qualitative and quantitative morphological characters were observed and measured respectively. The acetolysis of the pollen grains was carried out according to Erdtman method. Fresh and young leaves of the Boerhavia species studied were  collected for genomic DNA extraction using modified Dellarpota procedure. The quality and concentration of DNA was assessed by gel electrophoresis on 2% agarose with known concentrations of undigested lambda DNA. Subsequently, the DNA quantification was done according to standard measurement. The Principal Components Analysis of the morphological traits and the pollen grain studies indicated that the three Boerhavia species studied have a very high level of relationship. However, the Single Linkage Cluster Analysis of the morphological data and the unweighted pair group method with arithmetic mean (UPGMA) cluster analysis of RAPD data revealed that B. erecta is distantly related to B. coccinea and B. diffusa. Despite the fact that the three Boerhavia species studied possess high level of similarity, they can still be distinguished from each other. In conclusion, B. coccinea and B. diffusa are more closely related to each other than B. erecta. Key words: RAPD marker, Pollen grains, Phylogenetic relationship, Polymorphism

scholarly journals Neogene paleogeography provides context for understanding the origin and spatial distribution of cryptic diversity in a widespread Balkan freshwater amphipod

PeerJ ◽  
2017 ◽  
Vol 5 ◽  
pp. e3016 ◽  
Author(s):  
Michał Grabowski ◽  
Tomasz Mamos ◽  
Karolina Bącela-Spychalska ◽  
Tomasz Rewicz ◽  
Remi A. Wattier
Keyword(s):  
Evolutionary History ◽  
28S Rdna ◽  
Cryptic Diversity ◽  
The Balkans ◽  
Operational Taxonomic Units ◽  
Freshwater Biota ◽  
History Of ◽  
Riverine Habitats ◽  
Coi Sequences ◽  
High Level

BackgroundThe Balkans are a major biodiversity and endemism hotspot, worldwide. Among the freshwater biota, amphipods are known for their high cryptic diversity. However, little is known about the temporal and paleogeographic aspects of their evolutionary history. We used paleogeography as a framework for understanding the onset of diversification inGammarus roeselii: (1) we hypothesised that, given the high number of isolated waterbodies in the Balkans, the species is characterised by high level of cryptic diversity, even on a local scale; (2) the long geological history of the region might promote pre-Pleistocene divergence between lineages; (3) given thatG. roeseliithrives both in lakes and rivers, its evolutionary history could be linked to the Balkan Neogene paleolake system; (4) we inspected whether the Pleistocene decline of hydrological networks could have any impact on the diversification ofG. roeselii.Material and MethodsDNA was extracted from 177 individuals collected from 26 sites all over Balkans. All individuals were amplified for ca. 650 bp long fragment of the mtDNA cytochrome oxidase subunit I (COI). After defining molecular operational taxonomic units (MOTU) based on COI, 50 individuals were amplified for ca. 900 bp long fragment of the nuclear 28S rDNA. Molecular diversity, divergence, differentiation and historical demography based on COI sequences were estimated for each MOTU. The relative frequency, geographic distribution and molecular divergence between COI haplotypes were presented as a median-joining network. COI was used also to reconstruct time-calibrated phylogeny with Bayesian inference. Probabilities of ancestors’ occurrence in riverine or lacustrine habitats, as well their possible geographic locations, were estimated with the Bayesian method. A Neighbour Joining tree was constructed to illustrate the phylogenetic relationships between 28S rDNA haplotypes.ResultsWe revealed thatG. roeseliiincludes at least 13 cryptic species or molecular operational taxonomic units (MOTUs), mostly of Miocene origin. A substantial Pleistocene diversification within-MOTUs was observed in several cases. We evidenced secondary contacts between very divergent MOTUs and introgression of nDNA. The Miocene ancestors could live in either lacustrine or riverine habitats yet their presumed geographic localisations overlapped with those of the Neogene lakes. Several extant riverine populations had Pleistocene lacustrine ancestors.DiscussionNeogene divergence of lineages resulting in substantial cryptic diversity may be a common phenomenon in extant freshwater benthic crustaceans occupying areas that were not glaciated during the Pleistocene. Evolution ofG. roeseliicould be associated with gradual deterioration of the paleolakes. The within-MOTU diversification might be driven by fragmentation of river systems during the Pleistocene. Extant ancient lakes could serve as local microrefugia during that time.

scholarly journals Moral hazard in producer organizations - some experiences of an empirical survey

2016 ◽  
Vol 10 (4-5) ◽  
pp. 77-83
Author(s):  
Zoltán Kovács
Keyword(s):  
Moral Hazard ◽  
Direct Effect ◽  
Negative Impact ◽  
Trust Model ◽  
Path Model ◽  
Empirical Survey ◽  
Wide Range ◽  
Negative Effect ◽  
Jel Code ◽  
High Level

A wide range of empirical experiences shows that the performance of Hungarian producer organizations (aka TÉSZ) significantly falls behind the activity observed in the developed Western European countries. Regarding this issue, the present study examines how moral hazard - as one of the possible reasons - influences the producers’ activities in cooperative organizations. Information for the research was collected with the help of a questionnaire survey among the members of PaprikaKert TÉSZ Ltd. A statistical path model has been developed for the research, which assumed that - in addition to a direct effect - moral hazard also affects collaborative activity by eroding trust. The statistical model has been tested both in member-member and members-management relations. The experiences from the survey clearly show that moral hazard exists in the producer organization. According to my results, though its measure cannot be regarded numerically considerable, its negative effect on cooperative activity can be proved with statistical examinations. Its effect can be divided into two aspects: besides a direct effect, an indirect one can also be detected, which means that moral hazard is able to reduce producers’ willingness to cooperate by eroding trust. Moreover, our results have clearly pointed out that moral hazard has a negative impact on member-member and members-management relations to varying degrees and through different mechanisms. In addition to the above tests, the empirical testing of another model called Sholtes trust model has been carried out, too. The validating was successful, so the model - which attributes trust to the faith in the partner’s loyalty and capability - is basically acceptable. The argument says that high-level trust can be observed among partners only when faith both in loyalty and capability is strong enough. The research, however, revealed that the above-mentioned two factors determine it in a different way: regarding trust between members, the faith in capability is more important; while trust towards the management is more determined by faith in loyalty. JEL code: Q12, Q13

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