scholarly journals Soil Chemical Properties Barely Perturb the Abundance of Entomopathogenic Fusarium oxysporum: A Case Study Using a Generalized Linear Mixed Model for Microbial Pathogen Occurrence Count Data

Pathogens ◽  
2018 ◽  
Vol 7 (4) ◽  
pp. 89 ◽  
Author(s):  
Lav Sharma ◽  
Irene Oliveira ◽  
Fernando Raimundo ◽  
Laura Torres ◽  
Guilhermina Marques
Keyword(s):  
Fusarium Oxysporum ◽  
Count Data ◽  
Mixed Model ◽  
Linear Mixed Model ◽  
Organic Matter Content ◽  
Chemical Properties ◽  
Generalized Linear Mixed Model ◽  
Soil Chemical Properties ◽  
Available Phosphorus ◽  
Fungal Abundance

Fusarium oxysporum exhibits insect pathogenicity—however, generalized concerns of releasing phytopathogens within agroecosystems marred its entomopathogenicity-related investigations. In a previous study, soils were sampled from Douro vineyards and adjacent hedgerows. In this study, 80 of those soils were analyzed for their chemical properties and were subsequently co-related with the abundance of entomopathogenic F. oxysporum, after insect baiting of soils with Galleria mellonella and Tenebrio molitor larvae. The soil chemical properties studied were organic matter content; total organic carbon; total nitrogen; available potassium; available phosphorus; exchangeable cations, such as K+, Na+, Ca2+, and Mg2+; pH; total acidity; degree of base saturation; and effective cation exchange capacity. Entomopathogenic F. oxysporum was found in 48 soils, i.e., 60% ± 5.47%, of the total soil samples. Out of the 1280 insect larvae used, 93, i.e., 7.26% ± 0.72%, were found dead by entomopathogenic F. oxysporum. Stepwise deletion of non-significant variables using a generalized linear model was followed by a generalized linear mixed model (GLMM). A higher C:N (logarithmized) (p < 0.001) and lower exchangeable K+ (logarithmized) (p = 0.008) were found significant for higher fungal abundance. Overall, this study suggests that entomopathogenic F. oxysporum is robust with regard to agricultural changes, and GLMM is a useful statistical tool for count data in ecology.

Analyzing discontinuities in longitudinal count data: A multilevel generalized linear mixed model.

2020 ◽  
Author(s):  
James L. Peugh ◽  
Sarah J. Beal ◽  
Meghan E. McGrady ◽  
Michael D. Toland ◽  
Constance Mara
Keyword(s):  
Count Data ◽  
Mixed Model ◽  
Linear Mixed Model ◽  
Generalized Linear Mixed Model ◽  
Longitudinal Count Data

scholarly journals Characterization of soil chemical properties of strawberry fields using principal component analysis

2013 ◽  
Vol 37 (1) ◽  
pp. 168-176 ◽  
Author(s):  
Gláucia Oliveira Islabão ◽  
Marília Alves Brito Pinto ◽  
Lisiane Priscila Roldão Selau ◽  
Ledemar Carlos Vahl ◽  
Luís Carlos Timm
Keyword(s):  
Principal Component Analysis ◽  
Organic Matter ◽  
Soil Fertility ◽  
Organic Matter Content ◽  
Chemical Properties ◽  
Principal Component ◽  
Component Analysis ◽  
Soil Chemical Properties ◽  
Available Phosphorus ◽  
Very High

One of the largest strawberry-producing municipalities of Rio Grande do Sul (RS) is Turuçu, in the South of the State. The strawberry production system adopted by farmers is similar to that used in other regions in Brazil and in the world. The main difference is related to the soil management, which can change the soil chemical properties during the strawberry cycle. This study had the objective of assessing the spatial and temporal distribution of soil fertility parameters using principal component analysis (PCA). Soil sampling was based on topography, dividing the field in three thirds: upper, middle and lower. From each of these thirds, five soil samples were randomly collected in the 0-0.20 m layer, to form a composite sample for each third. Four samples were taken during the strawberry cycle and the following properties were determined: soil organic matter (OM), soil total nitrogen (N), available phosphorus (P) and potassium (K), exchangeable calcium (Ca) and magnesium (Mg), soil pH (pH), cation exchange capacity (CEC) at pH 7.0, soil base (V%) and soil aluminum saturation(m%). No spatial variation was observed for any of the studied soil fertility parameters in the strawberry fields and temporal variation was only detected for available K. Phosphorus and K contents were always high or very high from the beginning of the strawberry cycle, while pH values ranged from very low to very high. Principal component analysis allowed the clustering of all strawberry fields based on variables related to soil acidity and organic matter content.

scholarly journals Reducing Aggression by Developing Emotional and Inhibitory Control

2021 ◽  
Vol 18 (10) ◽  
pp. 5263
Author(s):  
Miriam Romero-López ◽  
María Carmen Pichardo ◽  
Ana Justicia-Arráez ◽  
Judit Bembibre-Serrano
Keyword(s):  
Psychosocial Development ◽  
Mixed Model ◽  
Linear Mixed Model ◽  
Generalized Linear Mixed Model ◽  
Emotional Control ◽  
Control Group ◽  
Post Intervention ◽  
Mixed Model Analysis ◽  
Intervention Measures ◽  
Experimental Group

The objective of this study is to measure the effectiveness of a program on improving inhibitory and emotional control among children. In addition, it is assessed whether the improvement of these skills has an effect on the reduction of aggressive behavior in pre-school children. The participants were 100 children, 50 belonging to the control group and 50 to the experimental group, aged between 5 and 6 years. Pre-intervention and post-intervention measures of inhibitory and emotional control (BRIEF-P) and aggression (BASC) were taken. A Generalized Linear Mixed Model analysis (GLMM) was performed and found that children in the experimental group scored higher on inhibitory and emotional control compared to their peers in the control group. In addition, these improvements have an effect on the decrease in aggressiveness. In conclusion, preventive research should have among its priorities the design of such program given their implications for psychosocial development.

scholarly journals Changes in Dairy Cow Behavior with and without Assistance at Calving

Agriculture ◽  
2021 ◽  
Vol 11 (8) ◽  
pp. 722
Author(s):  
Bethan Cavendish ◽  
John McDonagh ◽  
Georgios Tzimiropoulos ◽  
Kimberley R. Slinger ◽  
Zoë J. Huggett ◽  
...  
Keyword(s):  
Dairy Cows ◽  
Video Surveillance ◽  
Dairy Cow ◽  
Mixed Model ◽  
Linear Mixed Model ◽  
Generalized Linear Mixed Model ◽  
Behavioral Data ◽  
Behavioral Patterns ◽  
Holstein Friesian ◽  
Time Periods

The aim of this study was to characterize calving behavior of dairy cows and to compare the duration and frequency of behaviors for assisted and unassisted dairy cows at calving. Behavioral data from nine hours prior to calving were collected for 35 Holstein-Friesian dairy cows. Cows were continuously monitored under 24 h video surveillance. The behaviors of standing, lying, walking, shuffle, eating, drinking and contractions were recorded for each cow until birth. A generalized linear mixed model was used to assess differences in the duration and frequency of behaviors prior to calving for assisted and unassisted cows. The nine hours prior to calving was assessed in three-hour time periods. The study found that the cows spent a large proportion of their time either lying (0.49) or standing (0.35), with a higher frequency of standing (0.36) and shuffle (0.26) bouts than other behaviors during the study. There were no differences in behavior between assisted and unassisted cows. During the three-hours prior to calving, the duration and bouts of lying, including contractions, were higher than during other time periods. While changes in behavior failed to identify an association with calving assistance, the monitoring of behavioral patterns could be used as an alert to the progress of parturition.

scholarly journals Liming Effects of Sawdust Ash and Lime on Sunflower (Helianthus annuus L.) Yield in Acidic Soil of Southeastern Nigeria

2019 ◽  
pp. 1-11
Author(s):  
C. V. Ogbenna ◽  
V. E. Osodeke
Keyword(s):  
Soil Ph ◽  
Chemical Properties ◽  
Exchange Capacity ◽  
Acidic Soil ◽  
Soil Chemical Properties ◽  
Growth And Yield ◽  
Available Phosphorus ◽  
Yield Data ◽  
Southeastern Nigeria ◽  
Head Weight

Aim: A pot experiment was carried out to determine the effect of sawdust ash and lime (Ca(OH)2) on soil characteristics and yield of sunflower in acidic soil of southeastern Nigeria. Study Design: The experiment was laid out in split-plot design, using sawdust ash (0, 1, 2, 3, 4 t ha-1) as the sub plot and lime (0, 0.5, 1.0, 1.5 t ha-1) as the main plot. Place and Duration of Study: Study was conducted outdoors at Michael Okpara University of Agriculture Umudike, Nigeria, during the 2010 planting season. Materials and Methods: Treatment combinations were applied to the 60 buckets containing soil, mixed thoroughly and watered adequately. After 1 week of treatment application, two sunflower seeds were planted and later thinned to one seedling per bucket. Plant growth and yield data were collected. Pre planting and post-harvest soil samples were collected and analyzed for soil properties. Results: Results showed that with the exception of organic carbon there was significant effect of treatments on all soil chemical properties. Lime and sawdust ash (SDA) as single and combined treatments significantly increased total nitrogen (P=0.05), available phosphorus (P<0.010), and base saturation (P<0.012). The interaction between SDA and lime significantly (P=0.05) increased total exchangeable bases and effective cation exchange capacity, while soil pH was significantly increased (P=0.05) by single applications. The increases in soil chemical properties led to significant positive response of the sunflower. With the exception of number of leaves, other plant parameters (Plant height, stem diameter, head weight, 50 seed weight, head diameter) had significant increases for sawdust ash alone at P=0.05. Correlation studies showed positive significant relationship between soil pH and sunflower yield. Conclusion: The study showed that sunflower performed best at the combination of 3 tha-1 SDA and 1.5 t ha-1 lime producing a mean head weight of 45.4 g.

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