Lung Registration Using Automatically Detected Landmarks

2014 ◽  
Vol 53 (04) ◽  
pp. 250-256 ◽  
Author(s):  
J. Rühaak ◽  
R. Werner ◽  
H. Handels ◽  
J. Modersitzki ◽  
T. Polzin

SummaryObjectives: Accurate registration of lung CT images is inevitable for numerous clinical applications. Usually, nonlinear intensity-based methods are used. Their accuracy is typically evaluated using corresponding anatomical points (landmarks; e.g. bifurcations of bronchial and vessel trees) annotated by medical experts in the images to register. As image registration can be interpreted as correspond ence finding problem, these corresponding landmarks can also be used in feature-based registration techniques. Recently, approaches for automated identification of such landmark correspondences in lung CT images have been presented. In this work, a novel combination of variational nonlinear intensity-based registration with an approach for automated landmark correspond ence detection in lung CT pairs is presented and evaluated.Methods: The main blocks of the proposed hybrid intensity- and feature-based registration scheme are a two-step landmark correspondence detection and the so-called CoLD (Combining Landmarks and Distance Measures) framework. The landmark correspondence identification starts with feature detection in one image followed by a blockmatching-based transfer of the features to the other image. The established correspond ences are used to compute a thin-plate spline (TPS) transformation. Within CoLD, the TPS transformation is improved by minimization of an objective function consisting of a Normalized Gradient Field distance measure and a curvature regularizer; the landmark correspondences are guaranteed to be preserved by optimization on the kernel of the discretized landmark constraints.Results: Based on ten publicly available end-inspiration/expiration CT scan pairs with anatomical landmark sets annotated by medical experts from the DIR-Lab database, it is shown that the hybrid registration approach is superior in terms of accuracy: The mean distance of expert landmarks is decreased from 8.46 mm before to 1.15 mm after registration, outperforming both the TPS transformation (1.68 mm) and a nonlinear registration without usage of automatically detected landmarks (2.44 mm). The improvement is statistically significant in eight of ten datasets in comparison to TPS and in nine of ten datasets in comparison to the intensity-based registration. Furthermore, CoLD globally estimates the breathing-induced lung volume change well and results in smooth and physiologically plausible motion fields of the lungs.Conclusions: We demonstrated that our novel landmark-based registration pipeline outperforms both TPS and the underlying nonlinear intensity-based registration without landmark usage. This highlights the potential of automatic landmark correspondence detection for improvement of lung CT registration accuracy.

2019 ◽  
Vol 25 (2) ◽  
pp. 127-130
Author(s):  
K.A. Shaheer Abubacker ◽  
J. Sutha ◽  
K.A. Shahul Hameed

Abstract This paper describes a method of retrieving stereoscopic medical images from the database that consists of feature extraction, similarity measure, and re-ranking of retrieved images. This method retrieves similar images of the query image from the database and re-ranks them according to the disparity map. The performance is evaluated using the metrics namely average retrieval precision (APR) and average retrieval rate (ARR). According to the performance outcomes, the multi-feature based image retrieval using Mahalanobis distance measure has produced better result compared to other distance measures namely Euclidean, Minkowski, the sum of absolute difference (SAD) and the sum of squared absolute difference (SSAD). Therefore, the stereo image retrieval systems presented has high potential in biomedical image storage and retrieval systems.


2011 ◽  
Vol 32 (3) ◽  
pp. 237-244
Author(s):  
Hyun-Joon Lee ◽  
Young-Taek Hong ◽  
Hack-Joon Shim ◽  
Dong-Jin Kwon ◽  
Il-Dong Yun ◽  
...  

2004 ◽  
Vol 43 (04) ◽  
pp. 327-330 ◽  
Author(s):  
J. Modersitzki ◽  
B. Fischer

Summary Objectives: In this paper, we propose a novel registration technique, which combines the concepts of landmark and automatic, non-rigid intensity-based approaches. A general framework, which might be used for many different registration problems is presented. The novel approach enables the incorporation of different distance measures as well as different smoothers. Methods: The proposed scheme minimizes a regular-ized distance measure subject to some interpolation constraints. The desired deformation is computed iteratively using an Euler-scheme for the first variation of the chosen objective functional. Results: A fast and robust numerical scheme for the computation of the wanted minimizer is developed, implemented, and applied to various registration tasks. This includes the registration of pre- and post-intervention images of the human eye. Conclusions: A novel framework for a parameter-free, non-rigid registration scheme which allows for the additional incorporation of user-defined landmarks is proposed. It enhances the reliability of conventional approaches considerably and thereby their acceptability by practitioners in a clinical environment.


Symmetry ◽  
2021 ◽  
Vol 13 (3) ◽  
pp. 436
Author(s):  
Ruirui Zhao ◽  
Minxia Luo ◽  
Shenggang Li

Picture fuzzy sets, which are the extension of intuitionistic fuzzy sets, can deal with inconsistent information better in practical applications. A distance measure is an important mathematical tool to calculate the difference degree between picture fuzzy sets. Although some distance measures of picture fuzzy sets have been constructed, there are some unreasonable and counterintuitive cases. The main reason is that the existing distance measures do not or seldom consider the refusal degree of picture fuzzy sets. In order to solve these unreasonable and counterintuitive cases, in this paper, we propose a dynamic distance measure of picture fuzzy sets based on a picture fuzzy point operator. Through a numerical comparison and multi-criteria decision-making problems, we show that the proposed distance measure is reasonable and effective.


2018 ◽  
Vol 4 (1) ◽  
pp. 555-558 ◽  
Author(s):  
Fang Chen ◽  
Jan Müller ◽  
Jens Müller ◽  
Ronald Tetzlaff

AbstractIn this contribution we propose a feature-based method for motion estimation and correction in intraoperative thermal imaging during brain surgery. The motion is estimated from co-registered white-light images in order to perform a robust motion correction on the thermographic data. To ensure real-time performance of an intraoperative application, we optimise the processing time which essentially depends on the number of key points found by our algorithm. For this purpose we evaluate the effect of applying an non-maximum suppression (NMS) to improve the feature detection efficiency. Furthermore we propose an adaptive method to determine the size of the suppression area, resulting in a trade-off between accuracy and processing time.


Sensors ◽  
2021 ◽  
Vol 21 (1) ◽  
pp. 268
Author(s):  
Yeganeh Jalali ◽  
Mansoor Fateh ◽  
Mohsen Rezvani ◽  
Vahid Abolghasemi ◽  
Mohammad Hossein Anisi

Lung CT image segmentation is a key process in many applications such as lung cancer detection. It is considered a challenging problem due to existing similar image densities in the pulmonary structures, different types of scanners, and scanning protocols. Most of the current semi-automatic segmentation methods rely on human factors therefore it might suffer from lack of accuracy. Another shortcoming of these methods is their high false-positive rate. In recent years, several approaches, based on a deep learning framework, have been effectively applied in medical image segmentation. Among existing deep neural networks, the U-Net has provided great success in this field. In this paper, we propose a deep neural network architecture to perform an automatic lung CT image segmentation process. In the proposed method, several extensive preprocessing techniques are applied to raw CT images. Then, ground truths corresponding to these images are extracted via some morphological operations and manual reforms. Finally, all the prepared images with the corresponding ground truth are fed into a modified U-Net in which the encoder is replaced with a pre-trained ResNet-34 network (referred to as Res BCDU-Net). In the architecture, we employ BConvLSTM (Bidirectional Convolutional Long Short-term Memory)as an advanced integrator module instead of simple traditional concatenators. This is to merge the extracted feature maps of the corresponding contracting path into the previous expansion of the up-convolutional layer. Finally, a densely connected convolutional layer is utilized for the contracting path. The results of our extensive experiments on lung CT images (LIDC-IDRI database) confirm the effectiveness of the proposed method where a dice coefficient index of 97.31% is achieved.


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