scholarly journals Taxonomy and phylogeny of the Leptographium olivaceum complex (Ophiostomatales, Ascomycota), including descriptions of six new species from China and Europe

MycoKeys ◽  
2019 ◽  
Vol 60 ◽  
pp. 93-123 ◽  
Author(s):  
Mingliang Yin ◽  
Michael J. Wingfield ◽  
Xudong Zhou ◽  
Riikka Linnakoski ◽  
Z. Wilhelm de Beer

The Leptographium olivacea complex encompasses species in the broadly defined genus Leptographium (Ophiostomatales, Ascomycota) that are generally characterized by synnematous conidiophores. Most species of the complex are associates of conifer-infesting bark beetles in Europe and North America. The aims of this study were to reconsider the delineation of known species, and to confirm the identity of several additional isolates resembling L. olivacea that have emerged from recent surveys in China, Finland, Poland, Russia, and Spain. Phylogenetic analyses of sequence data for five loci (ACT, TUB, CAL, ITS2-LSU, and TEF-1α) distinguished 14 species within the complex. These included eight known species (L. cucullatum, L. davidsonii, L. erubescens, L. francke-grosmanniae, L. olivaceum, L. olivaceapini, L. sagmatosporum, and L. vescum) and six new species (herein described as L. breviuscapum, L. conplurium, L. pseudoalbum, L. rhizoidum, L. sylvestris, and L. xiningense). New combinations are provided for L. cucullatum, L. davidsonii, L. erubescens, L. olivaceum, L. olivaceapini, L. sagmatosporum and L. vescum. New Typifications: Lectotypes are designated for L. olivaceum, L. erubescens and L. sagmatosporum. Epitypes were designated for L. olivaceapini and L. sagmatosporum. In addition to phylogenetic separation, the synnematous asexual states and ascomata with almost cylindrical necks and prominent ostiolar hyphae, distinguish the L. olivaceum complex from others in Leptographium.

MycoKeys ◽  
2018 ◽  
Vol 36 ◽  
pp. 83-105 ◽  
Author(s):  
Jing Yang ◽  
Jian-Kui Liu ◽  
Kevin D. Hyde ◽  
E.B. Gareth Jones ◽  
Zuo-Yi Liu

A survey of freshwater fungi on submerged wood in China and Thailand resulted in the collection of three species in Dictyocheirospora and four species in Dictyosporium including two new species in the latter genus. Morphological characters and phylogenetic analyses based on ITS, LSU and TEF1α sequence data support their placement in Dictyocheirospora and Dictyosporium (Dothideomycetes). An updated backbone tree is provided for the family Dothideomycetes. Descriptions and illustrations of the new taxa and re-collections are provided. Four new combinations are proposed for Dictyocheirospora.


MycoKeys ◽  
2019 ◽  
Vol 47 ◽  
pp. 97-137 ◽  
Author(s):  
Janett Riebesehl ◽  
Eugene Yurchenko ◽  
Karen K. Nakasone ◽  
Ewald Langer

Xylodon (Hymenochaetales, Basidiomycota) is the largest segregate genus of Hyphodontia s.l. Based on molecular and morphological data, 77 species are accepted in Xylodon to date. Phylogenetic analyses of ITS and 28S sequences, including 38 new ITS and 20 28S sequences of Xylodon species, revealed four species new to science. The new taxa X.exilis, X.filicinus, X.follis and X.pseudolanatus from Taiwan, Nepal, Réunion, Belize, and USA are described and illustrated. In addition, species concepts for Odontiavesiculosa from New Zealand and Xylodonlanatus from U.S.A. are revised and the new name X.vesiculosus is proposed. Phylogenetic analyses of the ITS region placed X.spathulatus, X.bubalinus and X.chinensis in a strongly supported clade and demonstrated that they are conspecific. Palifer and Odontiopsis are synonymised under Xylodon based on morphological and sequence data. The following new combinations are proposed: X.erikssonii, X.gamundiae, X.hjortstamii, X.hyphodontinus, X.septocystidiatus and X.verecundus. Line drawings of X.cystidiatus, X.hyphodontinus, X.lanatus and X.vesiculosus, as well as photographs of X.raduloides basidiomata, are provided. A key to X.lanatus and similar species is presented.


Botany ◽  
2014 ◽  
Vol 92 (1) ◽  
pp. 9-22 ◽  
Author(s):  
Christine C. Braaten ◽  
P. Brandon Matheny ◽  
Debra L. Viess ◽  
Michael G. Wood ◽  
Joseph H. Williams ◽  
...  

The secotioid form of fruit bodies of mushroom-forming fungi may be an intermediate evolutionary modification of epigeous agaricoid or pileate–stipitate forms (i.e., with pileus, spore-bearing tissues, and stipe) and typically hypogeous, gasteroid- or truffle-forming species, in which the fruit bodies have been reduced to enclosed structures containing modified spore-producing tissues. To date, only a single secotioid species (Auritella geoaustralis Matheny & Bougher ex Matheny & Bougher) has been described in the ectomycorrhizal family Inocybaceae, a hyperdiverse clade of ca. 500–700 species with a cosmopolitan distribution. Fieldwork in Australia and western North America, however, has revealed two novel secotioid forms of Inocybe (Fr.) Fr., the first to be formally described in the genus. In this investigation, we analyze their phylogenetic relationships using molecular sequence data from multiple unlinked loci to test whether these are environmental variants of agaricoid forms or represent independent lineages. Results of phylogenetic analyses suggest these fungi have converged to the secotioid form independently. However, the California secotioid taxon (Inocybe multifolia f. cryptophylla f. nov.) is a phenotypic variant of the newly described agaricoid taxon (Inocybe multifolia sp. nov.). Similarly, the Australian secotioid form (Inocybe bicornis f. secotioides f. nov.) is nested within a clade of otherwise agaricoid forms of a second novel species (Inocybe bicornis sp. nov.) described from southwest Western Australia. Overall, four species with sequestrate forms within Inocybaceae can now be recognized, three of which are distributed in Australia and one in western North America, in the genera Auritella and Inocybe.


2019 ◽  
Vol 44 (4) ◽  
pp. 930-942
Author(s):  
Geraldine A. Allen ◽  
Luc Brouillet ◽  
John C. Semple ◽  
Heidi J. Guest ◽  
Robert Underhill

Abstract—Doellingeria and Eucephalus form the earliest-diverging clade of the North American Astereae lineage. Phylogenetic analyses of both nuclear and plastid sequence data show that the Doellingeria-Eucephalus clade consists of two main subclades that differ from current circumscriptions of the two genera. Doellingeria is the sister group to E. elegans, and the Doellingeria + E. elegans subclade in turn is sister to the subclade containing all remaining species of Eucephalus. In the plastid phylogeny, the two subclades are deeply divergent, a pattern that is consistent with an ancient hybridization event involving ancestral species of the Doellingeria-Eucephalus clade and an ancestral taxon of a related North American or South American group. Divergence of the two Doellingeria-Eucephalus subclades may have occurred in association with northward migration from South American ancestors. We combine these two genera under the older of the two names, Doellingeria, and propose 12 new combinations (10 species and two varieties) for all species of Eucephalus.


1967 ◽  
Vol 45 (12) ◽  
pp. 2267-2327 ◽  
Author(s):  
J. A. Parmelee

Sixty-two taxa are recognized in this study of the species of Puccinia completing their life cycle on Heliantheae. Six new species are described: Puccinia guatemalensis Parmelee on Zexmenia spp. and Wedelia spp., P. ghiesbreghtii Parmelee on Wedelia ghiesbreghtii, P. abramsii Parmelee on Geraea viscida (= Encelia viscida), P. chloracae Parmelee on Viguiera spp., P. calanticariae Parmelee on Viguiera spp., and P. praetermissa Parmelee on Lagascea spp. Six new varieties are recognized: Puccinia electrae var. robusta Parmelee and P. electrae var. depressiporosa Parmelee on Zexmenia brevifolia, P. caleae var. cuernavacae Parmelee on Calea spp., P. cognata var. echinulata Parmelee on Verbesina spp., P. cognata var. fraseri Parmelee on Viguiera fraseri, and P. affinis var. triporosa Parmelee on Viguiera spp. Three taxa have been restored from synonomy under P. abrupta, viz. P. subglobosa, P. ximenesiae, and P. affinis, the last two parasitic on Verbesina spp., the first on Rhysolepis (= Viguiera). P. tithoniae, P. nanomitra, and P. ordinata, are reduced to synonomy with P. enceliae var. enceliae, P. iostephanes, and P. melampodii respectively. New combinations include: P. enceliae var. aemulans (Syd.) Parmelee and P. abrupta var. partheniicola (Jacks.) Parmelee. A key based on uredinial and telial characters, others based initially on the hosts, and a host index are provided. Each taxon is illustrated by a photomicrograph from type material. Distribution and host extensions, supplementary to those given in Arthur's Manual of the Rusts, are indicated.


Zootaxa ◽  
2017 ◽  
Vol 4254 (5) ◽  
pp. 537 ◽  
Author(s):  
CHIA-HSUAN WEI ◽  
SHEN-HORN YEN

The Epicopeiidae is a small geometroid family distributed in the East Palaearctic and Oriental regions. It exhibits high morphological diversity in body size and wing shape, while their wing patterns involve in various complex mimicry rings. In the present study, we attempted to describe a new genus, and a new species from Vietnam, with comments on two assumed congeneric novel species from China and India. To address its phylogenetic affinity, we reconstructed the phylogeny of the family by using sequence data of COI, EF-1α, and 28S gene regions obtained from seven genera of Epicopeiidae with Pseudobiston pinratanai as the outgroup. We also compared the morphology of the new taxon to other epicopeiid genera to affirm its taxonomic status. The results suggest that the undescribed taxon deserve a new genus, namely Mimaporia gen. n. The species from Vietnam, Mimaporia hmong sp. n., is described as new to science. Under different tree building strategies, the new genus is the sister group of either Chatamla Moore, 1881 or Parabraxas Leech, 1897. The morphological evidence, which was not included in phylogenetic analyses, however, suggests its potential affinity with Burmeia Minet, 2003. This study also provides the first, although preliminary, molecular phylogeny of the family on which the revised systematics and interpretation of character evolution can be based. 


PeerJ ◽  
2020 ◽  
Vol 8 ◽  
pp. e7803 ◽  
Author(s):  
Daniel J. Chure ◽  
Mark A. Loewen

Allosaurus is one of the best known theropod dinosaurs from the Jurassic and a crucial taxon in phylogenetic analyses. On the basis of an in-depth, firsthand study of the bulk of Allosaurus specimens housed in North American institutions, we describe here a new theropod dinosaur from the Upper Jurassic Morrison Formation of Western North America, Allosaurus jimmadseni sp. nov., based upon a remarkably complete articulated skeleton and skull and a second specimen with an articulated skull and associated skeleton. The present study also assigns several other specimens to this new species, Allosaurus jimmadseni, which is characterized by a number of autapomorphies present on the dermal skull roof and additional characters present in the postcrania. In particular, whereas the ventral margin of the jugal of Allosaurus fragilis has pronounced sigmoidal convexity, the ventral margin is virtually straight in Allosaurus jimmadseni. The paired nasals of Allosaurus jimmadseni possess bilateral, blade-like crests along the lateral margin, forming a pronounced nasolacrimal crest that is absent in Allosaurus fragilis.


Phytotaxa ◽  
2021 ◽  
Vol 498 (3) ◽  
pp. 177-185
Author(s):  
MILAN ŠPETÍK ◽  
AKILA BERRAF-TEBBAL ◽  
ROBERT POKLUDA ◽  
ALEŠ EICHMEIER

During the investigation of fungal microbiome associated with boxwood in the Czech Republic, samples from Buxus sempervirens L. (Buxaceae) plants were collected and used for isolation. Two fungal strains were proposed as a new species Pyrenochaetopsis kuksensis based on morphology as well as phylogenetic analyses of ITS, LSU, rpb2, and tub2 sequence data. Detailed descriptions and phylogenetic relationships of the new taxon are provided.


2021 ◽  
Author(s):  
Renato Lúcio Mendes Alvarenga ◽  
Tatiana Baptista Gibertoni

Abstract Dacrymycetes has four families and 13 genera, few of them with molecular data available and then usually polyphyletic in phylogenetic analyses. Dacrymyces Nees is one of the polyphyletic genera in Dacrymycetes and it was introduced to accommodate one species, D. stillatus Nees. The morphological features of the genus are a homogeneous composition of the intra-structure and an amphigenous or superior hymenium. In this study, we included Neotropical specimens in the phylogeny of the Dacrymycetes and Dacrymyces s.s. is emended to include species with resupinate basidiomata, unilateral hymenium and heterogeneous context. In this new delimitation, the new species Dacrymyces flavobrunneus is described using morphological and molecular data and three new combinations (D. ceraceus comb. nov., D. maxidorii comb. nov. and D. spathularia comb. nov.) are proposed based on DNA analyses.


Phytotaxa ◽  
2021 ◽  
Vol 480 (1) ◽  
pp. 45-56
Author(s):  
YI-LE WAN ◽  
DAN-FENG BAO ◽  
ZONG-LONG LUO ◽  
DARBHE-JAYARAMA BHAT ◽  
YUE-XIN XU ◽  
...  

During a survey on diversity of freshwater fungi along a north-south latitudinal gradient in Asia, three fresh specimens of Minimelanolocus were collected from submerged wood in streams in northwestern Yunnan Province, China. Based on their distinct morphological features and phylogenetic analyses of combined ITS, LSU and SSU sequence data, Minimelanolocus nujiangensis and M. clavatus are described as new species and M. submersus was recollected from Yunnan, China. Illustrations and descriptions with notes of the three species are provided. This study increases the known diversity of Minimelanolocus and enriches freshwater fungal resources.


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