scholarly journals An updated checklist of the European Butterflies (Lepidoptera, Papilionoidea)

ZooKeys ◽  
2018 ◽  
Vol 811 ◽  
pp. 9-45 ◽  
Author(s):  
Martin Wiemers ◽  
Emilio Balletto ◽  
Vlad Dincă ◽  
Zdenek Faltynek Fric ◽  
Gerardo Lamas ◽  
...  
Keyword(s):  
European Country ◽  
Cryptic Species ◽  
Phylogenetic Relationships ◽  
The Other ◽  
Ural Mountains ◽  
Species Status ◽  
Asian Species ◽  
Senior Synonym ◽  
Eastern Border ◽  
New Evidence

This paper presents an updated checklist of the butterflies of Europe, together with their original name combinations, and their occurrence status in each European country. According to this checklist, 496 species of the superfamily Papilionoidea occur in Europe. Changes in comparison with the last version (2.6.2) of Fauna Europaea are discussed. Compared to that version, 16 species are new additions, either due to cryptic species most of which have been discovered by molecular methods (13 cases) or due to discoveries of Asian species on the eastern border of the European territory in the Ural mountains (three cases). On the other hand, nine species had to be removed from the list, because they either do not occur in Europe or lost their species status due to new evidence. In addition, three species names had to be changed and 30 species changed their combination due to new evidence on phylogenetic relationships. Furthermore, minor corrections were applied to some authors’ names and years of publication. Finally, the namePolyommatusottomanusLefèbvre, 1831, which is threatened by its senior synonymLycaenalegeriFreyer, 1830, is declared anomen protectum, thereby conserving its name in the current combinationLycaenaottomana.

scholarly journals An updated checklist of the European Butterflies (Lepidoptera, Papilionoidea)

ZooKeys ◽  
2018 ◽  
Vol 811 ◽  
pp. 9-45 ◽  
Author(s):  
Martin Wiemers ◽  
Emilio Balletto ◽  
Vlad Dincă ◽  
Zdenek Faltynek Fric ◽  
Gerardo Lamas ◽  
...  
Keyword(s):  
European Country ◽  
Cryptic Species ◽  
Phylogenetic Relationships ◽  
The Other ◽  
Ural Mountains ◽  
Species Status ◽  
Asian Species ◽  
Senior Synonym ◽  
Eastern Border ◽  
New Evidence

This paper presents an updated checklist of the butterflies of Europe, together with their original name combinations, and their occurrence status in each European country. According to this checklist, 496 species of the superfamily Papilionoidea occur in Europe. Changes in comparison with the last version (2.6.2) of Fauna Europaea are discussed. Compared to that version, 16 species are new additions, either due to cryptic species most of which have been discovered by molecular methods (13 cases) or due to discoveries of Asian species on the eastern border of the European territory in the Ural mountains (three cases). On the other hand, nine species had to be removed from the list, because they either do not occur in Europe or lost their species status due to new evidence. In addition, three species names had to be changed and 30 species changed their combination due to new evidence on phylogenetic relationships. Furthermore, minor corrections were applied to some authors’ names and years of publication. Finally, the namePolyommatusottomanusLefèbvre, 1831, which is threatened by its senior synonymLycaenalegeriFreyer, 1830, is declared anomen protectum, thereby conserving its name in the current combinationLycaenaottomana.

scholarly journals Comparative analysis and phylogenetic investigation of Hong Kong Ilex chloroplast genomes

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Bobby Lim-Ho Kong ◽  
Hyun-Seung Park ◽  
Tai-Wai David Lau ◽  
Zhixiu Lin ◽  
Tae-Jin Yang ◽  
...  
Keyword(s):  
Hong Kong ◽  
Comparative Analysis ◽  
Phylogenetic Relationships ◽  
Species Level ◽  
The Other ◽  
Trna Genes ◽  
Protein Coding ◽  
Chloroplast Genomes ◽  
Plant Group ◽  
Ilex Rotunda

AbstractIlex is a monogeneric plant group (containing approximately 600 species) in the Aquifoliaceae family and one of the most commonly used medicinal herbs. However, its taxonomy and phylogenetic relationships at the species level are debatable. Herein, we obtained the complete chloroplast genomes of all 19 Ilex types that are native to Hong Kong. The genomes are conserved in structure, gene content and arrangement. The chloroplast genomes range in size from 157,119 bp in Ilex graciliflora to 158,020 bp in Ilex kwangtungensis. All these genomes contain 125 genes, of which 88 are protein-coding and 37 are tRNA genes. Four highly varied sequences (rps16-trnQ, rpl32-trnL, ndhD-psaC and ycf1) were found. The number of repeats in the Ilex genomes is mostly conserved, but the number of repeating motifs varies. The phylogenetic relationship among the 19 Ilex genomes, together with eight other available genomes in other studies, was investigated. Most of the species could be correctly assigned to the section or even series level, consistent with previous taxonomy, except Ilex rotunda var. microcarpa, Ilex asprella var. tapuensis and Ilex chapaensis. These species were reclassified; I. rotunda was placed in the section Micrococca, while the other two were grouped with the section Pseudoaquifolium. These studies provide a better understanding of Ilex phylogeny and refine its classification.

Phylogenetic analysis of the subfamily Hylodinae (Anura, Leptodactylidae) based on morphological characters

2005 ◽  
Vol 26 (2) ◽  
pp. 139-147 ◽  
Author(s):  
Francisca do Val ◽  
Paulo Nuin
Keyword(s):  
Phylogenetic Analysis ◽  
Phylogenetic Relationships ◽  
Maximum Parsimony ◽  
Morphological Characters ◽  
The Other ◽  
The Family

AbstractThe systematics and phylogenetic relationships of the family Leptodactylidae are controversial as is the intrafamilial phylogeny of the leptodactylids. Here we analyze the relationships of the leptodactylid subfamily Hylodinae. This subfamily has been considered to be monophyletic and composed of three genera, Hylodes, Crossodactylus and Megaelosia. In the present study 49 characters were used, based on different studies on Leptodactylidae phylogeny. Maximum parsimony methods with unweighted and successively weighted characters were used to estimate the phylogeny of the Hylodinae. Upon analysis, the data provided further evidence of the monophyletic status of the three genera, with Megaelosia being the basal genus and the other two genera being sister taxa. The analysis with successive weighting results in a more resolved topology of the species subgroups of the genus Hylodes and separates this genus from Crossodactylus and confirms that the hylodines are monophyletic.

scholarly journals Benchmarking DNA barcodes: an assessment using available primate sequences

Genome ◽  
2006 ◽  
Vol 49 (7) ◽  
pp. 851-854 ◽  
Author(s):  
Mehrdad Hajibabaei ◽  
Gregory AC Singer ◽  
Donal A Hickey
Keyword(s):  
New Species ◽  
Cryptic Species ◽  
Dna Barcoding ◽  
Species Identification ◽  
Dna Sequences ◽  
Phylogenetic Relationships ◽  
Primate Species ◽  
Dna Barcodes ◽  
Global Biodiversity ◽  
Efficient Sequence

DNA barcoding has been recently promoted as a method for both assigning specimens to known species and for discovering new and cryptic species. Here we test both the potential and the limitations of DNA barcodes by analysing a group of well-studied organisms—the primates. Our results show that DNA barcodes provide enough information to efficiently identify and delineate primate species, but that they cannot reliably uncover many of the deeper phylogenetic relationships. Our conclusion is that these short DNA sequences do not contain enough information to build reliable molecular phylogenies or define new species, but that they can provide efficient sequence tags for assigning unknown specimens to known species. As such, DNA barcoding provides enormous potential for use in global biodiversity studies.Key words: DNA barcoding, species identification, primate, biodiversity.

New Evidence of Habitat Segregation between Two Cryptic Species of Pacific Skinks (Emoia cyanura and E. impar)

Copeia ◽  
1996 ◽  
Vol 1996 (4) ◽  
pp. 998 ◽  
Author(s):  
Emilio M. Bruna ◽  
Robert N. Fisher ◽  
Ted J. Case
Keyword(s):  
Cryptic Species ◽  
Habitat Segregation ◽  
New Evidence

Taxonomic review of Epicadinus Simon, 1895 (Araneae: Thomisidae) 

Zootaxa ◽  
2018 ◽  
Vol 4459 (2) ◽  
pp. 201 ◽  
Author(s):  
ANDRÉ WANDERLEY DO PRADO ◽  
RENNER LUIZ CERQUEIRA BAPTISTA ◽  
MIGUEL MACHADO
Keyword(s):  
French Guiana ◽  
The Other ◽  
Valid Species ◽  
Variable Size ◽  
Size And Shape ◽  
Taxonomic Review ◽  
Nomen Dubium ◽  
The World ◽  
Senior Synonym

The genus Epicadinus Simon, 1895 can easily be distinguished from the other Neotropical Stephanopines by their abundant and robust setiferous tubercles, topped by elongated macrosetae, which cover most of the tegument. Additionally, the genus can be recognized by a pair of conical ocular mounds above the ALE, the anterior eye row very recurved, posterior one slightly procurved; carapace flattened and without tubercles, and opisthosoma with three conical projections (“tubercles”) of variable size and shape. This work is a taxonomic review of the 12 valid species of Epicadinus as listed in version 19 of the World Spider Catalogue (2018), whose hitherto known distribution included few records from Brazil, French Guiana, Bolivia and Peru, and only one from Mexico. Four valid species are recognized: Epicadinus biocellatus Mello-Leitão, 1929; E. trispinosus (Taczanowski, 1872) [with two junior synonyms E. trifidus (Pickard-Cambridge, 1893) syn. nov. and E. cornutus (Taczanowski, 1872) syn. nov.]; E. spinipes (Blackwall, 1862) [with two junior synonyms E. albimaculatus Mello-Leitão, 1929 syn. nov. and E. gavensis Soares, 1946 syn. nov]; and E. villosus [with two junior synonyms E. helenae Piza, 1936 syn. nov. and E. marmoratus Mello-Leitão, 1947 syn. nov.]. Epicadinus polyophthalmus Mello-Leitão, 1929 and Epicadinus tuberculatus Petrunkevitch, 1910 are transferred to Epicadus. Epicadus polyophthalmus (Mello-Leitão, 1929) comb. nov. is considered a nomen dubium. Epicadus tuberculatus (Petrunkevitch, 1910) comb. nov. is a senior synonym of Epicadus pustulosus (Mello-Leitão, 1929) syn. nov. 

scholarly journals Complete chloroplast genome of Hordeum brevisubulatum: Genome organization, synonymous codon usage, phylogenetic relationships, and comparative structure analysis

PLoS ONE ◽  
2021 ◽  
Vol 16 (12) ◽  
pp. e0261196
Author(s):  
Guangxin Cui ◽  
Chunmei Wang ◽  
Xiaoxing Wei ◽  
Hongbo Wang ◽  
Xiaoli Wang ◽  
...  
Keyword(s):  
Phylogenetic Relationships ◽  
Genome Engineering ◽  
De Novo ◽  
Synonymous Codon ◽  
Northern China ◽  
Synonymous Codon Usage ◽  
The Other ◽  
Coding Regions ◽  
Cp Genome ◽  
Hordeum Brevisubulatum

Background Hordeum brevisubulatum, known as fine perennial forage, is used for soil salinity improvement in northern China. Chloroplast (cp) genome is an ideal model for assessing its genome evolution and the phylogenetic relationships. We de novo sequenced and analyzed the cp genome of H. brevisubulatum, providing a fundamental reference for further studies in genetics and molecular breeding. Results The cp genome of H. brevisubulatum was 137,155 bp in length with a typical quadripartite structure. A total of 130 functional genes were annotated and the gene of accD was lost in the process of evolution. Among all the annotated genes, 16 different genes harbored introns and the genes of ycf3 and rps12 contained two introns. Parity rule 2 (PR2) plot analysis showed that majority of genes had a bias toward T over A in the coding strand in all five Hordeum species, and a slight G over C in the other four Hordeum species except for H. bogdanil. Additionally, 52 dispersed repeat sequences and 182 simple sequence repeats were identified. Moreover, some unique SSRs of each species could be used as molecular markers for further study. Compared to the other four Hordeum species, H. brevisubulatum was most closely related to H. bogdanii and its cp genome was relatively conserved. Moreover, inverted repeat regions (IRa and IRb) were less divergent than other parts and coding regions were relatively conserved compared to non-coding regions. Main divergence was presented at the SSC/IR border. Conclusions This research comprehensively describes the architecture of the H. brevisubulatum cp genome and improves our understanding of its cp biology and genetic diversity, which will facilitate biological discoveries and cp genome engineering.

scholarly journals Gentile- und Reichsadel am östlichen Rand des Karolingischen Reiches

2021 ◽  
Vol 72 (2) ◽  
pp. 335-345
Keyword(s):  
Central Area ◽  
The Other ◽  
Personal Names ◽  
Eastern Border ◽  
Carolingian Empire

Abstract At the eastern border of the Carolingian Empire two different groups of elite emerged. When referred to, the individuals in one of the groups were called either by personal names, or by the name of the area they governed; individuals in the other group were called by the name of their people. Members of the first group administered the territorial units of the central area of the former Avar Khaganate just like the Carolingian chief officials and royal vassals in the interior of the Empire. The members of the second group were (indirect) allies of the Avars and had their own tribal prince and gentile nobles. The administrative centres of the Carolingian province Pannoniae developed in synchrony with the inner centres of the Empire, while the centres of power outside the Empire had their own special settlement structures showing a conglomerate of the courts of the tribal nobility.

Printers to Hendrik Niclaes: Plantin and Augustijn van Hasselt

Quaerendo ◽  
1984 ◽  
Vol 14 (4) ◽  
pp. 247-272 ◽  
Author(s):  
Paul Valkema Blouw
Keyword(s):  
The Other ◽  
Literary Sources ◽  
The Family ◽  
Religious Sect ◽  
Set Up ◽  
Number Of Publications ◽  
First Time ◽  
New Evidence ◽  
Publishing Business

AbstractFrom the chronicles of the Family of Love we know that, besides printers in Deventer and later in Cologne, both Plantin and Augustijn van Hasselt printed for this religious sect. On the basis of this information quite a large number of publications have hitherto been attributed to Plantin, while only one single edition in Latin was reckoned to be the work of Augustijn. An analysis of the typography, however, shows that apart from Hendrik Niclaes's chief work, Den Spegel der Gherechticheyt, Plantin only printed two of his minor writings and that all the other ascriptions to Plantin must be revised in favour of Augustijn van Hasselt. In 1561-2 Augustijn was running a printing shop in the Dutch town of Kampen, specially set up by HN for the purpose of publishing those of his works that had not previously been printed. Plantin, who was partly involved in this enterprise, took the opportunity to have a book printed on this press for his publishing business. The analysis providing the typographical evidence of this collaboration proves for the first time the accuracy of the literary sources as regards Plantin's involvement in the publication of the works of Hendrik Niclaes. In the presentation of the new evidence it was necessary to establish more clearly the date of Plantin's '[1561]' inventory and which roman and German types he owned at what times. The article ends with some notes regarding the end of the 'Bohmbargen' press at Cologne.

Herpetological higher taxa nomina. 6. Gymnophiona Rafinesque, 1814

Bionomina ◽  
2021 ◽  
Vol 21 (1) ◽  
pp. 39-72
Author(s):  
ALAIN DUBOIS ◽  
THIERRY FRÉTEY
Keyword(s):  
Rank Order ◽  
The Other ◽  
Distinct Class ◽  
Higher Taxa ◽  
Senior Synonym ◽  
Cladistic Analyses ◽  
Made In

A taxon, traditionally referred to the rank order, encompassing all recent taxa of caecilians and their close fossil relatives, is highly supported as holophyletic in all recent cladistic analyses of Amphibia. Under the Duplostensional Nomenclatural System, among 12 nomina available in the literature, only one, Gymnophiona Rafinesque, 1814, qualifies as a sozodiaphonym and should be used for this amphibian taxon. We show here that the authorship of this nomen, as well as of 32 other nomina published in 1814, is ‘Rafinesque’, not ‘Rafinesque-Schmaltz’.            The nomen Apoda Oppel, 1811, that has often been used for this taxon, proves to be a distagmonym and a junior homonym of Apodes Linnaeus, 1758 and five other distagmonyms, and as such it is invalid under DONS.            In total, we identified 34 distinct class-series nomina derived from the stems ἄπους (apous) or Apus in 13 distinct zoological groups, only two of which are valid under DONS Criteria: Apodiformia Wetmore, 1947, for the suborder of Aves currently known as Apodi Wetmore, 1947, and Apodomorpha Sibley, Ahlquist & Monroe, 1988 for the order of Aves currently known as Apodiformes Peters, 1940.                Several other nomenclatural findings were made in the course of this study: [1] in the Teleostei, the nomina "Eupercaria" and "Syngnatharia", like all the other new nomina proposed in the paper by Betancur-R. et al. (2017) are anoplonyms and cannot be used as valid; [2] in the Mammalia, the nomina Cetus and Cetacea should be credited to Brisson (1759); [3] in the Holothuroidea, the nomen Apoda Claus, 1868, currently considered valid under the apograph Apodida, is invalid and should be replaced by the nomen Paractinopoda Ludwig, 1891; [4] in the Isopoda, the subordinal nomen Cymothoida Wägele, 1989 should be replaced by its senior synonym Darwinida Lakshminarayana & Rama Rao, 1977.

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