scholarly journals Application of fnbA gene as new target for the species-specific and quantitative detection of Staphylococcus aureus directly from lower respiratory tract specimens by real time PCR

2012 ◽  
Vol 55 (4) ◽  
pp. 490 ◽  
Author(s):  
MohammadMehdi Feizabadi ◽  
Arash Ghodousi ◽  
Bizhan Nomanpour ◽  
Setareh Davoudi ◽  
Parviz Maleknejad ◽  
...  
2017 ◽  
Vol 23 (2) ◽  
pp. 69-73 ◽  
Author(s):  
Kentaro Nagaoka ◽  
Katsunori Yanagihara ◽  
Yosuke Harada ◽  
Koichi Yamada ◽  
Yohei Migiyama ◽  
...  

2005 ◽  
Vol 68 (6) ◽  
pp. 1217-1221 ◽  
Author(s):  
PAVEL KRCMAR ◽  
EVA RENCOVA

A sensitive and rapid method for the quantitative detection of bovine-, ovine-, swine-, and chicken-specific mitochondrial DNA sequences based on real-time PCR has been developed. The specificity of the primers and probes for real-time PCR has been tested using DNA samples of other vertebrate species that may also be present in rendered products. The quantitative detection was performed with dual-labeled probes (TaqMan) using absolute quantification with external standards of single species meat-and-bone meals. This method facilitates the detection of 0.01% of the target species–derived material in concentrate feed mixtures and fish meals.


2016 ◽  
Vol 64 (1) ◽  
pp. 13-19 ◽  
Author(s):  
Bassant Meligy ◽  
Amal Sayed ◽  
Dalia Kadry Ismail ◽  
Dina Kamal ◽  
Walaa Abdel-Latif ◽  
...  

2018 ◽  
Vol 47 (11) ◽  
pp. 2821-2829
Author(s):  
Zetti Zainol Rashid ◽  
Pei Chuan Lee ◽  
Umi Kalsom Ali ◽  
Mustaqillah Najihan Abdul Samat ◽  
Swee Fong Tang

2009 ◽  
Vol 16 (5) ◽  
pp. 672-678 ◽  
Author(s):  
Koichi Izumikawa ◽  
Suguru Akamatsu ◽  
Akiko Kageyama ◽  
Kiyomi Okada ◽  
Yukumasa Kazuyama ◽  
...  

ABSTRACT A novel, rapid, and noninvasive test (ODK0501) to detect Streptococcus pneumoniae antigen was evaluated in a Japanese multicenter study. ODK0501 uses polyclonal antibodies to detect C polysaccharide of S. pneumoniae from sputum samples by an immunochromatographic assay. The utility of ODK0501 was evaluated for 161 adult patients with lower respiratory tract infection between March 2006 and March 2007. Bacterial culture and identification, real-time PCR, and ODK0501 assays were performed on sputum samples, and the Binax Now Streptococcus pneumoniae antigen test was performed using urine samples obtained from the same patients. The performances of all tests were compared based on the results of bacterial culture and identification. The sensitivity and specificity of ODK0501 were 89.1% (49/55 samples) and 95.3% (101/106 samples), respectively. We then compared the Binax Now Streptococcus pneumoniae antigen test with ODK0501 using samples from 142 patients. The sensitivities of ODK0501 and the Binax Now S. pneumoniae antigen test were 90.0% (45/50 samples) and 62.0% (31/50 samples), respectively (P = 0.002). The relative quantity of S. pneumoniae in expectorated sputum was calculated using real-time PCR and indicated that the possibility of false-positive results for ODK0501 due to indigenous S. pneumoniae was low. The positive and negative concordance rates of ODK0501 and Binax Now were 96.8% (30/31 samples) and 21.1% (4/19 samples), respectively. Binax Now was less capable of detecting S. pneumoniae antigen among patients with underlying chronic obstructive pulmonary disease. In conclusion, ODK0501 is noninvasive, rapid, and an accurate tool for diagnosing respiratory infection caused by S. pneumoniae.


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