Determination of the Bacterial Community Structure in a Crude Oil-inundated Tropical Soil Using Next Generation Sequencing Technique

Journal of Advances in Microbiology ◽

10.9734/jamb/2018/41605 ◽

2018 ◽

Vol 11 (1) ◽

pp. 1-18 ◽

Author(s):

T Sampson ◽

C Ogugbue ◽

G Okpokwasili

Keyword(s):

Community Structure ◽

Next Generation Sequencing ◽

Bacterial Community ◽

Crude Oil ◽

Bacterial Community Structure ◽

Tropical Soil ◽

Next Generation ◽

Sequencing Technique ◽

Generation Sequencing

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Bacterial community structure analysis of a hot spring soil by next generation sequencing of ribosomal RNA

Genomics ◽

10.1016/j.ygeno.2018.06.008 ◽

2019 ◽

Vol 111 (5) ◽

pp. 1053-1058 ◽

Author(s):

Nivedita Rawat ◽

Gopal Krishna Joshi

Keyword(s):

Community Structure ◽

Next Generation Sequencing ◽

Bacterial Community ◽

Structure Analysis ◽

Ribosomal Rna ◽

Bacterial Community Structure ◽

Next Generation ◽

Generation Sequencing

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Bacterial community structure of contrasting soils underlying Bornean rain forests: Inferences from microarray and next-generation sequencing methods

Soil Biology and Biochemistry ◽

10.1016/j.soilbio.2012.05.021 ◽

2012 ◽

Vol 55 ◽

pp. 48-59 ◽

Author(s):

Sabrina E. Russo ◽

Ryan Legge ◽

Karrie A. Weber ◽

Eoin L. Brodie ◽

Katherine C. Goldfarb ◽

...

Keyword(s):

Community Structure ◽

Next Generation Sequencing ◽

Bacterial Community ◽

Bacterial Community Structure ◽

Next Generation ◽

Rain Forests ◽

Generation Sequencing

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USE OF NEXT-GENERATION SEQUENCING AND BACTERIAL COMMUNITY ANALYSIS IN PRIVATE GROUNDWATER WELLS TO IDENTIFY COMMON RECHARGE SOURCES

10.1130/abs/2019ne-328437 ◽

2019 ◽

Author(s):

Mark A. Higgins ◽

◽

Gary A. Robbins ◽

Kendra Maas ◽

Gordon K. Binkhorst

Keyword(s):

Next Generation Sequencing ◽

Bacterial Community ◽

Community Analysis ◽

Next Generation ◽

Recharge Sources ◽

Generation Sequencing ◽

Groundwater Wells

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A Benchmark of Structural Variant Analysis Tools for Next Generation Sequencing Data

International Journal of Systems Biology and Biomedical Technologies ◽

10.4018/ijsbbt.2013100106 ◽

2013 ◽

Vol 2 (4) ◽

pp. 86-98

Author(s):

Chatzinikolaou Panagiotis ◽

Makris Christos ◽

Dimitrios Vlachakis ◽

Sophia Kossida

Keyword(s):

Next Generation Sequencing ◽

Level Structure ◽

Atomic Level ◽

Protein Sequencing ◽

Next Generation Sequencing Data ◽

Next Generation ◽

Sequencing Data ◽

Variant Analysis ◽

Generation Sequencing

In language of genetics and biochemistry, sequencing is the determination of an unbranched biopolymer's primary structure. A sequence is a symbolic linear depiction, result of sequencing. This sequence is a succinct summary of the most of the sequenced molecule's atomic-level structure. (Most known is DNA-sequencing, RNA-sequencing, Protein-sequencing and Next-Generation-sequencing)

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Degradation of 2,4,6-trichlorophenol and determination of bacterial community structure by micro-electrical stimulation with or without external organic carbon source

Bioresource Technology ◽

10.1016/j.biortech.2018.05.015 ◽

2018 ◽

Vol 263 ◽

pp. 266-272 ◽

Author(s):

Hao Xu ◽

Na Tong ◽

Shaobin Huang ◽

Shaofeng Zhou ◽

Shuang Li ◽

...

Keyword(s):

Electrical Stimulation ◽

Community Structure ◽

Carbon Source ◽

Organic Carbon ◽

Bacterial Community ◽

Bacterial Community Structure ◽

Organic Carbon Source

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Comparison of three different gene panels for determination of tumor mutational burden by next generation sequencing

Annals of Oncology ◽

10.1093/annonc/mdz073.006 ◽

2019 ◽

Vol 30 ◽

pp. ii9

Author(s):

R. Pappesch ◽

C. Heydt ◽

J. Rehker ◽

S. Merkelbach-Bruse

Keyword(s):

Next Generation Sequencing ◽

Next Generation ◽

Mutational Burden ◽

Tumor Mutational Burden ◽

Gene Panels ◽

Generation Sequencing

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Next-Generation Sequencing Analyses of Bacterial Community Structures in Soybean Pastes Produced in Northeast China

Journal of Food Science ◽

10.1111/1750-3841.13665 ◽

2017 ◽

Vol 82 (4) ◽

pp. 960-968 ◽

Author(s):

Mi-Hwa Lee ◽

Fan-Zhu Li ◽

Jiyeon Lee ◽

Jisu Kang ◽

Seong-Il Lim ◽

...

Keyword(s):

Next Generation Sequencing ◽

Bacterial Community ◽

Northeast China ◽

Next Generation ◽

Community Structures ◽

Generation Sequencing

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Erratum for Salipante et al., Performance Comparison of Illumina and Ion Torrent Next-Generation Sequencing Platforms for 16S rRNA-Based Bacterial Community Profiling

Applied and Environmental Microbiology ◽

10.1128/aem.01390-16 ◽

2016 ◽

Vol 82 (14) ◽

pp. 4453-4453 ◽

Author(s):

Stephen J. Salipante ◽

Toana Kawashima ◽

Christopher Rosenthal ◽

Daniel R. Hoogestraat ◽

Lisa A. Cummings ◽

...

Keyword(s):

Next Generation Sequencing ◽

Bacterial Community ◽

16S Rrna ◽

Performance Comparison ◽

Ion Torrent ◽

Next Generation ◽

Community Profiling ◽

Sequencing Platforms ◽

Generation Sequencing

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Parent material and vegetation influence bacterial community structure and nitrogen functional genes along deep tropical soil profiles at the Luquillo Critical Zone Observatory

Soil Biology and Biochemistry ◽

10.1016/j.soilbio.2014.10.019 ◽

2015 ◽

Vol 80 ◽

pp. 273-282 ◽

Author(s):

Madeleine M. Stone ◽

Jinjun Kan ◽

Alain F. Plante

Keyword(s):

Community Structure ◽

Bacterial Community ◽

Bacterial Community Structure ◽

Critical Zone ◽

Tropical Soil ◽

Parent Material ◽

Functional Genes ◽

Soil Profiles ◽

Critical Zone Observatory

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Next-Generation Sequencing of HIV-1 RNA Genomes: Determination of Error Rates and Minimizing Artificial Recombination

PLoS ONE ◽

10.1371/journal.pone.0074249 ◽

2013 ◽

Vol 8 (9) ◽

pp. e74249 ◽

Author(s):

Francesca Di Giallonardo ◽

Osvaldo Zagordi ◽

Yannick Duport ◽

Christine Leemann ◽

Beda Joos ◽

...

Keyword(s):

Next Generation Sequencing ◽

Error Rates ◽

Next Generation ◽

Generation Sequencing ◽

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