Biogeochemical Niches of Fe-cycling Communities Influencing Heavy Metal Transport Along the Rio Tinto, Spain

In the mining-impacted Rio Tinto, Spain, Fe-cycling microorganisms influence the transport of heavy metals (HMs) into the Atlantic Ocean. However, it remains largely unknown how spatial and temporal hydrogeochemical gradients along the Rio Tinto shape the composition of Fe-cycling microbial communities and how this in turn affects HM mobility. Using a combination of DNA- and RNA-based 16S rRNA (gene) amplicon sequencing and hydrogeochemical analyses, we explored the impact of pH, Fe(III), Fe(II) and Cl - on Fe-cycling microorganisms. We showed that the water column at the acidic (pH 2.2) middle course of the river was colonized by Fe(II) oxidizers affiliating with Acidithiobacillus and Leptospirillum. At the upper estuary, daily fluctuations of pH (2.7-3.7) and Cl - (6.9-16.6 g/L) contributed to the establishment of a unique microbial community, including Fe(II) oxidizers belonging to Acidihalobacter , Marinobacter and Mariprofundus identified at this site. Furthermore, DNA- and RNA-based profiles of the benthic community suggested that acidophilic and neutrophilic Fe(II) oxidizers (e.g., Acidihalobacter , Marinobacter and Mariprofundus ), Fe(III) reducers (e.g., Thermoanaerobaculum ) and sulfate-reducing bacteria drive the Fe cycle in the estuarine sediments. RNA-based relative abundances of Leptospirillum at the middle course as well as abundances of Acidohalobacter and Mariprofundus at the upper estuary were higher, compared to DNA-based results, suggesting potentially higher level of activity of these taxa. Based on our findings, we propose a model of how tidal water affects the composition and activity of the Fe-cycling taxa, playing an important role in the transport of HMs (e.g., As, Cd, Cr and Pb) along the Rio Tinto. Importance The estuary of the Rio Tinto is a unique environment in which extremely acidic, heavy metal- and especially iron-rich river water is mixed with seawater. Due to the mixing events, the estuarine water is characterized by a low pH, almost sea water salinity and high concentrations of bioavailable iron. The unusual hydrogeochemistry maintains unique microbial communities in the estuarine water and in the sediment. These communities include halotolerant iron-oxidizing microorganisms which typically inhabit acidic saline environments and marine iron-oxidizing microorganisms, which, in opposite, are not typically found in acidic environments. Furthermore, highly saline estuarine water favored the prosperity of acidophilic heterotrophs, typically inhabiting brackish and saline environments. The Rio Tinto estuarine sediment harbored a diverse microbial community with both, acidophilic and neutrophilic members that can mediate the iron cycle, and in turn, can directly impact the mobility and transport of heavy metals in the Rio Tinto estuary.

Occurrence of thraustochytrids: the fungoid protists vis-a-vis marine macroalgae (seaweeds) along the coast of Goa, India

Thraustochytrids are fungoid protists ubiquitous in the marine environment and found to be associated with decaying macroalgae. Not much is known about their association with living macroalgae. Hence in the present study, different macroalgal samples were collected from various beaches of Goa to examine the presence of thraustochytrids during a four-year-long study. Brown, red and green algae were found to be substrata of thraustochytrids. Thraustochytrids were isolated on pine pollen baiting from 17 to 58% of the specimens. Thraustochytrids isolated from various macroalgae belonged to the genera Oblongichytrium, Schizochytrium, Ulkenia, and Thraustochytrium. Labyrinthula sp. was also found once on the green alga Bryopsis hypnoides. These were generally found during dry seasons rather than in monsoons. The seasonal occurrence of thraustochytrids was found to be associated with temporal variation in macroalgal diversity. The statistical analysis supported individual or interactive effects of both factors viz, seasons and macroalgal diversity, on the occurrence of thraustochytrids. Thraustochytrids were also isolated from seawater adjoining macroalgae and from estuarine water at all times of the year. Oblongichytrium sp. was isolated from the green alga Ulva compressa and Anjuna seawater samples at the same time, thus indicating that thraustochytrids from seawater could inhabit the macroalgae.

Influence of Estuarine Water on the Microbial Community Structure of Patagonian Fjords

Fjords are sensitive areas affected by climate change and can act as a natural laboratory to study microbial ecological processes. The Chilean Patagonian fjords (41–56°S), belonging to the Subantarctic ecosystem (46–60°S), make up one of the world’s largest fjord systems. In this region, Estuarine Water (EW) strongly influences oceanographic conditions, generating sharp gradients of oxygen, salinity and nutrients, the effects of which on the microbial community structure are poorly understood. During the spring of 2017 we studied the ecological patterns (dispersal and oceanographic factors) underlying the microbial community distribution in a linear span of 450 km along the estuarine-influenced Chilean Patagonian fjords. Our results show that widespread microbial dispersion existed along the fjords where bacterioplankton exhibited dependence on the eukaryotic phytoplankton community composition. This dependence was particularly observed under the low chlorophyll-a conditions of the Baker Channel area, in which a significant relationship was revealed between SAR11 Clade III and the eukaryotic families Pyrenomonadaceae (Cryptophyte) and Coccomyxaceae (Chlorophyta). Furthermore, dissolved oxygen and salinity were revealed as the main drivers influencing the surface marine microbial communities in these fjords. A strong salinity gradient resulted in the segregation of the Baker Channel prokaryotic communities from the rest of the Patagonian fjords. Likewise, Microbacteriaceae, Burkholderiaceae and SAR11 Clade III, commonly found in freshwater, were strongly associated with EW conditions in these fjords. The direct effect of EW on the microbial community structure and diversity of the fjords exemplifies the significance that climate change and, in particular, deglaciation have on this marine region and its productivity.

Dissolved and Particulate Beryllium Isotopes in the Pearl River Estuary: Their Geochemical Behavior in Estuarine Water and Potential Contributions From Anthropogenic Sources

The ratio of cosmogenic 10Be and its stable isotope 9Be has been used as a proxy of long-term continental weathering fluxes and denudation rates, but transport processes of these isotopes from river water to estuarine water and seawater, as well as interference of potential anthropogenic source of 9Be on natural 10Be/9Be around populated estuaries are not well constrained. Here, we present results of 10Be and 9Be concentrations of dissolved and reactive particulate phase in the Pearl River Estuary (PRE) and its eight major outlets. The concentrations of Cu, Cd, and Pb are also measured, allowing us to assess their contamination levels and anthropogenic source together with 9Be by the geo-accumulation index (Igeo–reac) and enrichment factor (EF). A wide distribution pattern of dissolved 10Be (137–1,194 at/gwater) and 9Be (0.781–8.31 × 10–12 g/gwater) among these outlets is observed. The distribution coefficients (Kd) of both isotopes between sediment and water are in the order of 105, and on average only 5% of 10Be exists as dissolved form. Compared with total meteoric 10Be deposited on the river basin, 23% of the meteoric 10Be is retained while 38% of 10Be finally escape the estuary and is transported into coastal seawater. Despite the high contamination levels of Cu and Cd, the lower Igeo–reac and EF values of 9Be indicate that 9Be is hardly polluted by anthropogenic source. Thus, the 10Be/9Be in the PRE area is mainly associated with natural processes instead of human activities.

The impact of tropical land-use change on downstream riverine and estuarine water properties and biogeochemical cycles: a review

Tropical primary forests have been disappearing quickly to make use of the land for commercial purposes. Land-use change has an impact on downstream aquatic processes, but those impacts have mainly been studied in temperate climate regions. The present article reviews the impacts of various tropical land-use changes caused by human activities on downstream riverine and estuarine water properties and biogeochemical cycles, focusing especially on the behaviors of nitrogen (N) and phosphorus (P). Logging of tropical primary forests, subsequent establishment of pasture lands, and occasional wildfire or intentional burning have decreased terrestrial N fixation and increased the discharge of P combined with soils, which has lowered the N:P ratio of dissolved inorganic nutrients in the adjacent stream waters and downstream rivers. Agricultural fertilizers and aquacultural practices basically cause nutrient enrichment in downstream riverine and estuarine waters, changing the N:P ratio depending on the source. Finally, urbanization causes eutrophication in many tropical estuaries, where a halocline forms easily because of a warm temperature throughout the year and the water at the bottom of the estuary tends to become hypoxic or anoxic. Overall, the impact of land-use change on aquatic processes may be more serious in tropical regions than in temperate or cold climate regions because of (1) a higher biomass and nutrient stock in original tropical forests; (2) higher precipitation, more frequent episodic flooding, and warmer temperatures in tropical regions; and (3) certain practices that are rapidly expanding in tropical regions such as land-based aquaculture. Various land-use changes are causing downstream nutrient enrichment or disturbance of the nutrient balance at tropical land-sea interfaces, and the overall N:P ratios in the aquatic ecosystem seem to be declining. Nonetheless, if proper management is conducted and the discharge of nutrients and soils ceases, tropical aquatic systems may have the potential to recover faster than those in other climate regions because of their abundant precipitation and warm temperature. Long-term monitoring and more attention to elemental stoichiometry are important areas for future research.

Time-dependent hematological responses of Nile tilapia Oreochromis niloticus exposed to an estuarine contaminated water

We aimed to study hematological responses of Oreochromis niloticus experimentally exposed to the contaminated water of the Santos-São Vicente Estuary, testing hypotheses that exposure time to estuarine water promotes deleterious effects on hematological parameters and evaluating the use of erythrocytes and leukocytes alterations as environmental biomarkers. Estuarine water was collected from Largo da Pompeba. For the biological assay, 28 juveniles of O. niloticus (red strain) of both genders were randomly selected from commercial pisciculture. For the biological assay, 28 juveniles of O. niloticus of both sexes were randomly selected from commercial fish farms. The juveniles were kept in estuarine water for 72 and 120 hours and, after exposure, blood was collected by puncture of the caudal vein to determine total erythrocytes, hemoglobin concentration, hematocrit, hematimetric indices and total leukocytes, as lymphocyte, neutrophils, monocytes, eosinophils, and basophils were quantified by blood extensions. To test exposure overtime on hematological variables, we performed a two-factor Multivariate Analysis of Variance. Exposure for 72 hours resulted in immunosuppression as seen by the reduced counts of neutrophils, monocytes, and lymphocytes in the bloodstream, whereas after 120 hours the immune system was stimulated with the increase of all leukocyte cell types. Exposure to estuarine water resulted in marked changes in the leukocyte count of O. niloticus, demonstrating that alterations in white blood cells might be more sensitive biomarkers than red blood parameters.