acute lymphocytic leukemia
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2021 ◽  
Vol 50 (1) ◽  
pp. 351-351
Author(s):  
Yezan Abderrahman ◽  
Kristen Brown ◽  
Aditya Badheka ◽  
Madhuradhar Chegondi

2021 ◽  
Vol 7 (11) ◽  
pp. 103246-103260
Author(s):  
Caroline Lehnen ◽  
Joyce Kelly Busolin Jardim ◽  
Michelli Saposki ◽  
Paula Otávia Haacke Branco ◽  
Jennifer Maria Moschen ◽  
...  

Blood ◽  
2021 ◽  
Vol 138 (Supplement 1) ◽  
pp. 4826-4826
Author(s):  
Vibhu Agarwal ◽  
Alexandru Socolov ◽  
Robert Buderi ◽  
Emelly Rusli ◽  
Lilia Bouzit ◽  
...  

Abstract Background: Despite the potential for durable disease remission seen with Chimeric Antigen Receptor (CAR-T) and T-Cell Receptor (TCR-T) therapies, their use is limited by the potential for acute toxicity from Cytokine-Release Syndrome (CRS).Across all grades, CRS has seen rates as high as 100% in some trials of patients receiving CAR-T, and up to 15% receiving TCR-T. Prior research indicates an association of hematologic abnormalities with CRS. Due to smaller average trial size and limited adoption, to date, of CAR and TCR therapies, there have been no large-scale studies to date exploring these associations with CRS severity in a wide range of patients across treatment types. This study sought to address these evidence gaps using retrospective analysis of pooled clinical trial data in Acute Lymphocytic Leukemia (ALL), using, to our knowledge, the single largest data repository of of CAR-T and TCR-T clinical patient data, with high resolution measurements across a spectrum of clinical domains. Methods: Eligible Phase I, II and III completed clinical trials in Acute Lymphocytic Leukemia (ALL), with patients receiving either CAR-T or TCR-T, were identified from the Medidata Enterprise Data Store, which comprises over 22,000 historical clinical trials, for de-identified retrospective aggregate analyses. Baseline characteristics, including demographics, medical history, prior treatment regimens were assessed and stratified by treatment type. Pre-trial history of hematologic conditions, such as neutropenia and anemia, were also assessed. Using Common Terminology Criteria for Adverse Events (CTCAE) 4.03, patients were assigned to categories of any CRS, mild CRS (grade 1) and moderate-to-severe CRS (2+). Hematologic function was assessed at baseline through first exposure to treatment, including counts of erythrocytes, neutrophils, eosinophils and basophils. Baseline marrow blast cell percentage was assessed as a marker of tumor burden. Univariate analyses of associations between pre-treatment baseline variables and CRS were conducted using Wilcoxon signed rank tests. Results: The pooled CT data contained 1,410 ALL patients, of whom over 60% were 18 year of age or greater. Baseline blood chemistries indicated 21% with anemia, 12% with thrombocytopenia, 6% neutropenic and 5.3% with elevated LDH. Although CAR-T patients accounted for 14.9% of the cohort, 47% of CRS events observed were associated with CAR-T treatment. In line with expectations from prior literature, factors associated with moderate-to-severe CRS included prior history of anemia, reduced platelet levels, low neutrophil counts, and delayed neutrophil recovery. Nearly all cases of moderate-to-severe CRS occurred in subjects exhibiting both low neutrophil and low platelet counts (Figure 1). Similar associations were seen in patients with pretreatment history of anemia (Figure 2). Consistent with literature on tumor burden and CRS, patients without CRS tended to have lower marrow blast percentages. Lymphocyte levels at baseline were far lower in patients receiving CAR-T therapy, with slower recovery than in patients receiving TCR-T. While consistent with CAR-T pre-treatment lymphodepletion, this finding was noteworthy given the association of neutropenia with CRS. Conclusions: Overall findings suggest patterns of routine hematologic function at baseline can potentially be used to assess risk of moderate-to-severe CRS in patients receiving CAR-T and TCR-T agents. The association with these markers could also suggest a mechanism of CRS as a function of tumor cell concentration, modified by the strength and presence of innate immunity mechanisms such as granulocytes, and potentially mediated by intermediates such as macrophages, in line with emerging literature., Further analysis may facilitate development of predictive algorithms to identify patients at greater risk for severe CRS prior to as well as shortly after treatment. This has implications for enhancing supportive care for patients receiving CAR- and TCR therapies. Additionally, a data-driven stratification of patients by risk of CRS will allow improved utilization and management of care resources. Figure 1 Figure 1. Disclosures Agarwal: Medidata Acorn AI, a Dassault Systèmes Company: Current Employment. Socolov: Medidata Acorn AI, a Dassault Systèmes Company: Current Employment. Buderi: Medidata Acorn AI, a Dassault Systèmes Company: Current Employment. Rusli: Medidata Acorn AI, a Dassault Systèmes Company: Current Employment. Bouzit: Medidata Acorn AI, a Dassault Systèmes Company: Current Employment. Talwai: Medidata Acorn AI, a Dassault Systèmes Company: Current Employment. Itzkovich: Medidata Acorn AI, a Dassault Systèmes Company: Current Employment. Galaznik: Medidata Acorn AI, a Dassault Systèmes Company: Current Employment, Current equity holder in publicly-traded company. Aptekar: Medidata Acorn AI, a Dassault Systèmes Company: Current Employment.


Blood ◽  
2021 ◽  
Vol 138 (Supplement 1) ◽  
pp. 4925-4925
Author(s):  
Abhisek Ghosal ◽  
Francys Alarcon ◽  
Samuel Koo ◽  
Soo Jin Kang ◽  
Archana Ramesh ◽  
...  

Abstract Background: Paired-box Pax gene family protein 5 (PAX5)/B-cell specific activator protein (BSAP) is a transcription factor encoded by the PAX5 gene and has an essential role in B-cell differentiation and maturation. High PAX5 expression is detected ensures commitment to B-cell lineage. PAX5 is normally downregulated at the plasma cell stage of B-cell development. Complete or partial deletion of the PAX5 gene has been found as secondary event associated with BCR-ABL1 or TCF3-PBX1 fusions in Acute Lymphocytic Leukemia (ALL) cases. PAX5 expression is a diagnostic marker for B-cell lineage and may help quantify minimal residual disease in B-ALL. Lineage determination of leukemic blasts is most often performed by flow cytometry, but also by immunohistochemistry (IHC). Evaluation of PAX5 is most commonly available by IHC and is not widely performed by flow cytometry. In cases with limited specimen for evaluation or aberrant loss of some B-cell markers, determining quantitative levels of RNA from lineage-specific genes, such as PAX5, could be a valuable clinical diagnostic tool for ALL patients. Our existing single tube NGS based assay for simultaneous detection of DNA alterations and RNA fusions in heme malignancies from Total Nucleic Acid (TNA), can also be used to detect PAX5 gene expression through select exons enrichment along with a total of 213 genes. However, one of the current challenges for NGS-based gene expression profiling is to setup a threshold for overexpression. Here we developed a cutoff criterion for PAX5 overexpression and evaluated the performance of PAX5 gene expression analysis using the in-use heme assay and its potential use in clinical laboratory for cell lineage detection. Methods: RNA sequencing was performed on TNA extracted from ALL samples and from 32 healthy donors using partial anchored amplicon based (Qiagen, inc) heme NGS assay. PAX5 RNA expression was calculated by TPM (transcript per million) counts normalized to TPM of the house-keeping gene GUSB. A commercially available qRT-PCR assay was used as orthogonal method to confirm the gene expression. The expression call by NGS based on the normalized value was confirmed by a commercial qRT-PCR assay in house validated through serial dilutions of template for six log scale. The analytical cutoff was determined from normalized TPM calculation from 32 healthy volunteers following CLSI guideline (CLSI_EP17-A2) and evaluated the outcome with IHC positive /negative clinical samples (a CLIA validated assay). Further, we used the established cutoff to evaluate the sensitivity or specificity in cohort of ALL samples. Results: In this study we established the cutoff for PAX5 gene over-expression using the currently in-use heme NGS assay. First, a cutoff was established following the method in the CLSI guidelines and tested for sensitivity and specificity in the ALL sample cohort. PAX5 TPM normalization to GUSB or to the geometric mean of four house keeping genes (GUSB, PGD, RPL5 and RPL19) showed a strong correlation (R2>0.95), and GUSB was selected for further normalization since GUSB TPM values were most conserved across all the samples. Independent in-house evaluation for commercial qRT-PCR assay showed efficiency at 94.3 and 96% for GUSB and PAX5, respectively (with linearity R2>0.95), and been used to compare the NGS and IHC data as independent orthogonal assay. When a cohort of samples for Pax5 by IHC (positive and negative), a sensitivity at 67% and specificity at 100% were observed for the NGS based Pax5 detection. NGS results on the discordant samples were confirmed by qRT-PCR to have low RNA expression. Notably the discordant, IHC positive samples contained very low numbers of B cells. Alongside with other possible mechanisms of increased protein levels such as increased protein translation/increased protein stability could explain the discordance between RNA expression and the protein detection by IHC. Conclusions: In this study we demonstrate that NeoGenomics's (heme) NGS assay can be used for PAX5 gene over-expression analysis on ALL. The heme NGS is inexpensive and is already integrated in the benchwork workflow without adding extra burden and can be used as an objective quantification of PAX5 levels overcoming the challenges associated with the relative signal intensity biases in IHC testing. This type of RNA testing can be useful especially with specimens having limited material. Disclosures Ghosal: NeoGenomics Laboratories: Current Employment. Alarcon: NeoGenomics Laboratories: Current Employment. Koo: Neo Genomics Laboratories: Current Employment. Kang: Neo Genomics Laboratories: Current Employment. Ramesh: Neo Genomics Laboratories: Current Employment. Gyuris: Neo Genomics Laboratories: Current Employment. Jung: NeoGenomics Laboratories, Inc.: Current Employment. Thomas: NeoGenomics Laboratories, Inc.: Current Employment. Fabunan: NeoGenomics Laboratories, Inc.: Current Employment. Magnan: NeoGenomics Laboratories, Inc.: Current Employment. Nam: NeoGenomics Laboratories, Inc.: Current Employment. Petersen: Neo Genomics Laboratories: Current Employment. Lopez-Diaz: NeoGenomics Laboratories, Inc.: Current Employment. Bender: NeoGenomics Laboratories, Inc.: Current Employment. Agersborg: NeoGenomics Laboratories, Inc.: Current Employment. Ye: Neo Genomics Laboratories: Current Employment. Funari: NeoGenomics Laboratories, Inc.: Current Employment.


Blood ◽  
2021 ◽  
Vol 138 (Supplement 1) ◽  
pp. 3012-3012
Author(s):  
Rebecca Crawford ◽  
Verna L Welch ◽  
Richa Shah ◽  
Lynda Doward ◽  
Cheryl Truchan

Abstract Social media (SM) data is emerging as an important source of information on patient disease and treatment experiences. SM data provide researchers access to unsolicited information shared by patients/caregivers (CGs)/healthcare providers (HCPs), without burdens associated with traditional research methods or influence of interviewer bias. SM facilitates open communication on serious illness in an unstructured forum; offering snap shots of information that highlight important issues prioritized by patients/CGs/HCPs. SM data is growing exponentially, manual review of this noisy "Big Data" is time consuming and impractical. Natural language understanding (NLU) provides an optimal approach to extracting structured data elements from unstructured text. This pilot study aimed to use NLU to aggregate, analyze, and better understand various aspects of patients/CGs/HCPs experiences of Acute lymphocytic leukemia (ALL). ALL is a blood and bone marrow cancer with a significant patient symptom burden and detrimental impact on patient/CG health-related quality of life (HRQOL). Publicly available, English-language SM data were indexed from a 25-month period (Jul.2018-Aug.2020). Data were extracted using Sprinklr (Twitter), and Board Reader (boards/blogs/forums/reviews). NLU was applied to capture insights (e.g., emerging patterns/trends/relationships). Advanced analytics identified and analyzed relevant insights, and advanced logic determined user type and post contributor (e.g., patient/CGs/HCP). Posts underwent further manual evaluation using thematic content analysis to explore the experience of ALL shared by users and to support NLU-identified insights. 6,365 ALL-related posts were identified; 289 (4.5%) were contributed by patients, 657 (10.3%) by CGs, 1224 (19.2%) by HCPS and 4,195 (65.9%) by organizations. Topics included expressions of positive support/encouragement for patients/monetary donation requests/treatment type/impact of side effects. NLU identified notable discussion areas: patient/CG commentaries on treatment experiences, decisions, side effects and outcomes, and patient knowledge regarding ALL treatments. 189 patient/CG posts discussed ALL treatments in general, including in-hospital time: missing life events due to intensive treatment regimens and extended hospital stays. 195 patient/CG posts discussed specific ALL treatment experiences: chemotherapy, n=120; bone marrow transplant, n=22; stem cell transplant, n=16; immunotherapy, n=14; Kymriah, n=11; CAR-T, n=8; radiation, n=4. Chemotherapy was mentioned in relation to daily and/or durable short-and long-term effects (e.g., sickness, pain) which had major impacts for patients' and their family's HRQOL. Chemotherapy was associated with unforeseen impacts related to patients compromised immune systems (e.g., restricted social functioning due to increased risk of infection). Fear of infection and impact of treatment notably increased patients' needs to isolate which had a substantial impact on the broader family life. Bone marrow transplant posts described it as 'lifesaving'. Despite uncertainty of treatment success and negative treatment effects, patient/CG posts noted that side effects were an acceptable part of the journey to become cancer free. Posts also illustrated a general shift in patient/CG perception of ALL treatments, specifically that no one treatment works for everyone in the same way, and recent treatment developments mean that ALL is no longer perceived as a death sentence. 66 patient/CG posts commented on the cessation of treatment or lack of treatment due to remission, alternative treatments or end of life. Financial burden due to ALL treatment was an important issue for patients/CGs as it prevented the start of treatment or impaired patients'/CGs' lives. This pilot study shows how NLU can effectively extract SM data expressed by patients/CGs/HCPs relating to ALL. It is important to note that SM data are unregulated, not peer reviewed and inherently reliant on user self-identification. Thus, caution should be used interpreting SM data particularly as the information is not generalizable and/or reflective of the whole ALL patient population. Nevertheless, the pilot demonstrated how user-generated SM data can offer valuable insights on the experience and impact of ALL and its treatments that exist outside of the formal research context. Disclosures Crawford: Pfizer Inc: Consultancy. Welch: Pfizer Inc: Current Employment. Shah: Pfizer Inc: Current Employment. Doward: Pfizer Inc: Consultancy. Truchan: Pfizer Inc: Current Employment.


Author(s):  
Ji Zhong Zhao ◽  
Yu Cheng Lu ◽  
Yan Min Wang ◽  
Bo Lian Xiao ◽  
Hong Yan Li ◽  
...  

Abstract Objective Diabetes increases the risk for cancers. However, whether it is associated with hematologic malignancies is not clear. The present study investigated the association between diabetes and acute lymphocytic leukemia (ALL), acute myeloid leukemia (ML), non-Hopkin lymphoma (NHL), and multiple myeloma (MM). Methods Newly diagnosed adult cancer patients were recruited consecutively from our clinical database. Peoples from a local enterprise were recruited to create a small-scale population-based dataset. We compared the diabetes prevalence between the cancer patients and the local people; an increase in diabetes prevalence in the cancer patients suggests an association between diabetes and the cancer(s). Results We found that the prevalence of diabetes was 19.7%, 21.3%, 12.5%, and 12.0% in ALL, AML, NHL, and MM, respectively, which was higher than that (9.1%) in the local people. Despite that there were more male than female cancer patients, there were more female than male diabetic patients. The increase in diabetes prevalence occurred in ALL and NHL patients aged 18 to 39 years old as well as in AML patients over 40. In MM patients, the increase in diabetes prevalence (18.6%) occurred only in females. Approximately 70% of the diabetic patients were undiagnosed before the diagnosis of the blood cancer. Approximately half of the pre-existing diabetic patients had anti-diabetic treatment, with over 70% of them still had poor glycemic control. Conclusions Our results suggest that diabetes is associated with ALL, AML, NHL, and MM, at least in adult patients.


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