Nitrogen Fixation in Subtropical Seagrass Sediments: Seasonal Patterns in Activity in Santa Rosa Sound, Florida, USA

Seagrass beds are important coastal habitats that are diminishing globally. Nitrogen, a key nutrient, often limits seagrass growth. Nitrogen fixation provides new, bioavailable nitrogen to the plants. This study explores its importance and factors controlling rates in sediments colonized by two dominant taxa in Northwest Florida, Thalassia testudinum and Halodule wrightii, compared to unvegetated sediments. We hypothesized that nitrogen fixation rates would be greater in seagrass colonized sediments, particularly during high growth periods. We expected to observe a positive relationship between rates and porewater sulfide concentrations because sulfate reducers were the dominant diazotrophs in similar studies. Rates were higher in vegetated areas. In H. wrightii beds, nitrogen fixation was driven by the decreased availability of porewater ammonium relative to phosphorus. In T. testudinum beds, rates were highest during winter. Organic matter may be a controlling factor in all substrate types albeit the exact mechanism driving nitrogen fixation differs slightly. During the summer and fall, nitrogen fixation provided between 1–15% of T. testudinum nitrogen demand. Annually, nitrogen fixation provided 4% and 1% of T. testudinum and H. wrightii nitrogen demand, respectively. Nitrogen fixation was an important source of nitrogen during periods of senescence and dormancy when organic matter content was high.

Benthic Flow and Mixing in a Shallow Shoal Grass (Halodule wrightii) Fringe

Mean flow and turbulence measurements collected in a shallow Halodule wrightii shoal grass fringe highlighted significant heterogeneity in hydrodynamic effects over relatively small spatial scales. Experiments were conducted within the vegetation canopy (~4 cm above bottom) for relatively sparse (40% cover) and dense (70% cover) vegetation, with reference measurements collected near the bed above bare sediment. Significant benthic velocity shear was observed at all sample locations, with canopy shear layers that penetrated nearly to the bed at both vegetated sites. Turbulent shear production (P) was balanced by turbulent kinetic energy dissipation (ϵ) at all sample locations (P/ϵ≈1), suggesting that stem-generated turbulence played a minor role in the overall turbulence budget. While the more sparsely vegetated sample site was associated with enhanced channel-to-shore velocity attenuation (71.4 ± 1.0%) relative to flows above bare sediment (51.7 ± 2.2%), unexpectedly strong cross-shore currents were observed nearshore in the dense canopy (VNS), with magnitudes that were nearly twice as large as those measured in the main channel (VCH; VNS/VCH¯ = 1.81 ± 0.08). These results highlight the importance of flow steering and acceleration for within- and across-canopy transport, especially at the scale of individual vegetation patches, with important implications for nutrient and sediment fluxes. Importantly, this work represents one of the first hydrodynamic studies of shoal grass fringes in shallow coastal estuaries, as well as one of the only reports of turbulent mixing within H. wrightii canopies.

Seagrass, bioindicator, light, water quality, Zostera marina, Zostera noltii, Halodule wrightii, monitoring, Chlorophyll fluorescence, stable isotope, nutrients.

This thesis aims to investigate the effect of environmental drivers on seagrasses by studying shoot-scale and meadow-scale responses, focussing on Zostera marina, Zostera noltii and Halodule wrightii. Seagrasses are plants that have evolved from being terrestrial to living in an entirely marine environment which means they have become highly adapted. The conditions that effect seagrass growth can also be described as drivers as they have the ability to modify seagrass meadows in a variety of ways. These drivers can either be natural environmental factors or anthropogenic processes directly or indirectly affecting the marine environment in which seagrasses are found. These responses environmental conditions allow seagrasses to be used as indicators of the health of our coastal waters with poor water quality causing substantial impacts on seagrasses. Better knowledge of seagrass responses to local environmental conditions will help the identification of stressors which can then be managed. It will also help to comprehend the degree of risk to be expected from the threat of climate change including increased storm events, rises in sea level and sea temperature, and ocean acidification. Mitigating existing or potential impacts that lead to a reduction in water quality will improve the overall health and resilience of the seagrass to future threats from climate change.

Temporal variations of Halodule wrightii meadows and associated fauna near their southern distribution limit in the southwestern Atlantic

Halodule wrightii meadows in Southern Brazil have been regressing in an unsheltered area of the subtropical Paranaguá Bay, near their southern limit in the SW Atlantic, since 2006. To identify early indicators of regression events, we assessed variations in plant and macrobenthic structure in two local meadows under unsheltered and protected conditions. Differences between sites increased after an epiphytic overgrowth of the alga Hincksia mitchelliae at the unsheltered site. Seagrass growth was suppressed and the numbers of burrowing and opportunistic benthic species increased with the increase of algal biomass. In the protected meadow, seagrass biomass and number of leaves changed seasonally, but macrobenthic abundance and species richness remained stable. Ecosystem changes were evident when the unsheltered meadow was already collapsing. The number of leaves per shoot, the horizontal internode length, the abundance and structure of the macrofaunal associations, and the host-epiphyte surface interactions, were the first variables to reflect the early stages of seagrass regression. Our results suggest that the persistence of H. wrightii meadows at their southern distribution limit in the SW Atlantic will be affected by local hydrodynamics and their ability to compete with ephemeral macroalgal species under stress conditions.