butanol extraction
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2019 ◽  
Vol 287 ◽  
pp. 110960
Author(s):  
Atulkumar N. Raut ◽  
Abhishek R. Dhobe ◽  
Preety S. Gedam ◽  
Pradip B. Dhamole

2019 ◽  
Vol 215 ◽  
pp. 287-298 ◽  
Author(s):  
Sun Dezhang ◽  
Feng Huisheng ◽  
Xin Feng ◽  
Li Wenxiu ◽  
Zhang Zhigang

Metabolites ◽  
2018 ◽  
Vol 8 (4) ◽  
pp. 77
Author(s):  
Shreya Shaw ◽  
Robin Ghosh

The Kulka resorcinol assay (Kulka, R.G., Biochemistry 1956, 63, 542–548) for ketoses has been widely used in the literature but suffers from two major disadvantages: (a) it employs large amounts of potentially harmful reagents for a general biology laboratory environment; and (b) in its original formulation, it is unsuited for modern high-throughput applications. Here, we have developed a modified Kulka assay, which contains a safer formulation, employing approx. 5.4 M HCl in 250 µL aliquots, and is suitable for use in high-throughput systems biology or enzymatic applications. The modified assay has been tested extensively for the measurement of two ketoses—fructose (a common substrate in cell growth experiments) and 1-deoxy-d-xylulose-5-phosphate (DXP), the product of the DXP-synthase reaction—which until now has only been assayable using time-consuming chromatographic methods or radioactivity. The Kulka microassay has a sensitivity of 0–250 nmol fructose or 0–500 nmol DXP. The assay is suitable for monitoring the consumption of fructose in bacterial growth experiments but is too insensitive to be used directly for the measurement of DXP in in vitro enzyme assays. However, we show that after concentration of the DXP-enzyme mix by butanol extraction, the Kulka resorcinol method can be used for enzyme assays.


2018 ◽  
Vol 475 ◽  
pp. 89-94 ◽  
Author(s):  
Urszula Domańska ◽  
Michal Wlazło ◽  
Monika Karpińska ◽  
Maciej Zawadzki

2018 ◽  
Vol 91 ◽  
pp. 119-129 ◽  
Author(s):  
Dezhang Sun ◽  
Huisheng Feng ◽  
Feng Xin ◽  
Wenxiu Li ◽  
Zhigang Zhang

2009 ◽  
Vol 55 (6) ◽  
pp. 1218-1222 ◽  
Author(s):  
Max Scherer ◽  
Gerd Schmitz ◽  
Gerhard Liebisch

Abstract Background: Lysophosphatidic acid (LPA) and sphingosine 1-phosphate (S1P) are ubiquitous lipid messengers found in the blood and most cell types. Both lysophospholipids are ligands of G protein–coupled receptors and mediate important physiological processes. Moreover, lysophospholipids are potential biomarkers for various diseases, including atherosclerosis and cancer. Because existing methodologies are of limited value for systematic evaluations of S1P and LPA in clinical studies, we developed a fast and simple quantification method that uses liquid chromatography–tandem mass spectrometry (LC-MS/MS). Methods: Sphingoid base 1-phosphates and LPA species were quantified in negative-ion mode with fragments of m/z 79 and 153, respectively. The internal standards LPA 17:0 and [13C2D2]S1P were added before butanol extraction. Application of hydrophilic-interaction chromatography allowed coelution of analytes and internal standards with a short analysis time of 2.5 min. Results: Comparison of butanol extraction with a frequently used extraction method based on strong acidification of human plasma revealed artificial formation of LPA from lysophosphatidylcholine with the latter method. Validation according to US Food and Drug Administration guidelines showed an overall imprecision (CV) of <12% and a limit of detection <6 nmol/L for all lysophospholipid species. Concentrations of S1P and sphinganine 1-phosphate (SA1P) in EDTA-containing plasma were stable for 24 h at room temperature, whereas LPA concentrations increased substantially over this period. Conclusions: Our validated LC-MS/MS methodology for quantifying LPA, S1P, and SA1P features simple sample preparation and short analysis times, therefore providing a valuable tool for diagnostic evaluation of these lysophospholipids as biomarkers.


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