pka shift
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2021 ◽  
Author(s):  
Sidney Carvalho ◽  
Ralf Metzler ◽  
Andrey Cherstvy ◽  
Daniel Caetano

Several applications arise from the confinement of proteins on surfaces since their stability and biological activity are enhanced. It is also known that the way a protein adsorbs on the surface is important for its biological function since its active sites should not be obstructed. In this study, the adsorption properties of hen egg-white Lysozyme, HEWL, into a negatively charged silica pore is examined employing a coarse-grained model and constant-pH Monte Carlo simulations. The role of electrostatic interactions is taken into account when including the Debye-Hueckel potentials into the Ca structure-based model. We evaluate the effects of pH, salt concentration, and pore radius on the protein preferential orientation and spatial distribution of its residues regarding the pore surface. By mapping the residues that stay closer to the pore surface, we find the increase of pH leads to orientational changes of the adsorbed protein when the solution pH gets closer to the HEWL isoelectric point. At these conditions, the pKa shift of these important residues caused by the adsorption into the charged confining surface results in a HEWL charge distribution that stabilizes the adsorption in the observed protein orientation. We compare our observations to the results of pKa shift for HEWL available in the literature and to some experimental data.


Talanta ◽  
2020 ◽  
Vol 216 ◽  
pp. 120965
Author(s):  
Shengrui Zhang ◽  
Qin Wang ◽  
Fangfang Wu ◽  
Jiajun Yang ◽  
Tianyi Cheng ◽  
...  

2019 ◽  
Vol 281 ◽  
pp. 568-573 ◽  
Author(s):  
Ting Yin ◽  
Sheng Zhang ◽  
Mengxuan Li ◽  
Carl Redshaw ◽  
Xin-Long Ni
Keyword(s):  

2018 ◽  
Vol 90 (6) ◽  
pp. 4119-4125 ◽  
Author(s):  
Shengrui Zhang ◽  
Qin Wang ◽  
Xiawei Liu ◽  
Jianjian Zhang ◽  
Xiao-Feng Yang ◽  
...  

2018 ◽  
Vol 90 (4) ◽  
pp. 2946-2953 ◽  
Author(s):  
Shengrui Zhang ◽  
Guojun Chen ◽  
Yuanyuan Wang ◽  
Qin Wang ◽  
Yaogang Zhong ◽  
...  

2017 ◽  
Vol 57 (7) ◽  
pp. 1621-1639 ◽  
Author(s):  
Zhaoxi Sun ◽  
Xiaohui Wang ◽  
Jianing Song

2017 ◽  
Vol 53 (53) ◽  
pp. 7381-7384 ◽  
Author(s):  
Guchuan Ping ◽  
Yiliang Wang ◽  
Lingyun Shen ◽  
Yuting Wang ◽  
Xiaoshi Hu ◽  
...  

Efficient complexation of sanguinarine by carboxylatopillar[6]arene. The pKa shift, increased solubility, and enhanced antibacterial activity are described.


2017 ◽  
Vol 15 (20) ◽  
pp. 4336-4343 ◽  
Author(s):  
Hang Yin ◽  
Linmin Chen ◽  
Binrui Yang ◽  
David Bardelang ◽  
Chunming Wang ◽  
...  

The significant fluorescence enhancement and pKa shift of fasudil upon encapsulation by cucurbit[7]uril may provide a traceable enteric formulation.


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