muscle segmentation
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Biology ◽  
2022 ◽  
Vol 11 (1) ◽  
pp. 134
Author(s):  
Xiang Yu ◽  
Shui-Hua Wang ◽  
Juan Manuel Górriz ◽  
Xian-Wei Jiang ◽  
David S. Guttery ◽  
...  

As an important imaging modality, mammography is considered to be the global gold standard for early detection of breast cancer. Computer-Aided (CAD) systems have played a crucial role in facilitating quicker diagnostic procedures, which otherwise could take weeks if only radiologists were involved. In some of these CAD systems, breast pectoral segmentation is required for breast region partition from breast pectoral muscle for specific analysis tasks. Therefore, accurate and efficient breast pectoral muscle segmentation frameworks are in high demand. Here, we proposed a novel deep learning framework, which we code-named PeMNet, for breast pectoral muscle segmentation in mammography images. In the proposed PeMNet, we integrated a novel attention module called the Global Channel Attention Module (GCAM), which can effectively improve the segmentation performance of Deeplabv3+ using minimal parameter overheads. In GCAM, channel attention maps (CAMs) are first extracted by concatenating feature maps after paralleled global average pooling and global maximum pooling operation. CAMs are then refined and scaled up by multi-layer perceptron (MLP) for elementwise multiplication with CAMs in next feature level. By iteratively repeating this procedure, the global CAMs (GCAMs) are then formed and multiplied elementwise with final feature maps to lead to final segmentation. By doing so, CAMs in early stages of a deep convolution network can be effectively passed on to later stages of the network and therefore leads to better information usage. The experiments on a merged dataset derived from two datasets, INbreast and OPTIMAM, showed that PeMNet greatly outperformed state-of-the-art methods by achieving an IoU of 97.46%, global pixel accuracy of 99.48%, Dice similarity coefficient of 96.30%, and Jaccard of 93.33%, respectively.


2022 ◽  
Vol 15 (1) ◽  
pp. 1-14
Author(s):  
Divyashree B. V. ◽  
Amarnath R. ◽  
Naveen M. ◽  
Hemantha Kumar G.

In this paper, pectoral muscle segmentation was performed to study the presence of malignancy in the pectoral muscle region in mammograms. A combined approach involving granular computing and layering was employed to locate the pectoral muscle in mammograms. In most cases, the pectoral muscle is found to be triangular in shape and hence, the ant colony optimization algorithm is employed to accurately estimate the pectoral muscle boundary. The proposed method works with the left mediolateral oblique (MLO) view of mammograms to avoid artifacts. For the right MLO view, the method automatically mirrors the image to the left MLO view. The performance of this method was evaluated using the standard mini MIAS dataset (mammographic image analysis society). The algorithm was tested on 322 images and the overall accuracy of the system was about 97.47 %. The method is robust with respect to the view, shape, size and reduces the processing time. The approach correctly identifies images when the pectoral muscle is completely absent.


Author(s):  
Filippo Gagliardi ◽  
Silvia Snider ◽  
Edoardo Pompeo ◽  
Marzia Medone ◽  
Martina Piloni ◽  
...  

AbstractThe temporal region is a great source of vascularized flap, providing extremely variable and versatile options for reconstruction in head and neck surgery. Its popularity has led to the conception of a large variety of different flaps, in terms of contents and design. Temporal flaps are highly pliable and flexible, providing adequate bulk to obliterate dead spaces and improving engraftment, thus facilitating wound healing. The need to access different anatomical compartments, often far from the original flap anatomical site, has led surgeons to develop techniques to enlarge pedicles and bulk, by reverting and splitting flaps' contents, as well as through partial mandibular and zygomatic resection. To further increase versatility, a multilayered combination of different regional tissues and muscle segmentation techniques has been described. Historically, each flap has had its own proponents and opponents, but a pointy review systematizing techniques and comparatively analyzing different flaps was still missing in the literature. The field of use of some flaps has been progressively limited by the increasing relevance of free tissue transfers, which nowadays may provide success rates up to 95% with a constrained morbidity, thus offering an effective alternative, when available. Given the wide range of reconstructive strategies based on temporal flaps, there is still a great debate on nomenclature and surgical techniques. The present study systematizes the topic, classifying regional flaps according to contents and indications. Harvesting techniques are described stepwise and schematically illustrated, thus offering an indispensable tool to the armamentarium of reconstructive surgeons.


2021 ◽  
Vol 1 ◽  
Author(s):  
Michael Gadermayr ◽  
Lotte Heckmann ◽  
Kexin Li ◽  
Friederike Bähr ◽  
Madlaine Müller ◽  
...  

Deep neural networks recently showed high performance and gained popularity in the field of radiology. However, the fact that large amounts of labeled data are required for training these architectures inhibits practical applications. We take advantage of an unpaired image-to-image translation approach in combination with a novel domain specific loss formulation to create an “easier-to-segment” intermediate image representation without requiring any label data. The requirement here is that the task can be translated from a hard to a related but simplified task for which unlabeled data are available. In the experimental evaluation, we investigate fully automated approaches for segmentation of pathological muscle tissue in T1-weighted magnetic resonance (MR) images of human thighs. The results show clearly improved performance in case of supervised segmentation techniques. Even more impressively, we obtain similar results with a basic completely unsupervised segmentation approach.


2021 ◽  
Vol 11 (9) ◽  
pp. 4021
Author(s):  
Peter Ardhianto ◽  
Jen-Yung Tsai ◽  
Chih-Yang Lin ◽  
Ben-Yi Liau ◽  
Yih-Kuen Jan ◽  
...  

Deep learning has aided in the improvement of diagnosis identification, evaluation, and the interpretation of muscle ultrasound images, which may benefit clinical personnel. Muscle ultrasound images presents challenges such as low image quality due to noise, insufficient data, and different characteristics between skeletal and smooth muscles that can affect the effectiveness of deep learning results. From 2018 to 2020, deep learning has the improved solutions used to overcome these challenges; however, deep learning solutions for ultrasound images have not been compared to the conditions and strategies used to comprehend the current state of knowledge for handling skeletal and smooth muscle ultrasound images. This study aims to look at the challenges and trends of deep learning performance, especially in regard to overcoming muscle ultrasound image problems such as low image quality, muscle movement in skeletal muscles, and muscle thickness in smooth muscles. Skeletal muscle segmentation presents difficulties due to the regular movement of muscles and resulting noise, recording data through skipped connections, and modified layers required for upsampling. In skeletal muscle classification, the problems faced are area-specific, thus making a cropping strategy useful. Furthermore, there is no need to add additional layer modifications for smooth muscle segmentation as muscle thickness is the main problem in such cases.


2021 ◽  
pp. 232020682110056
Author(s):  
Kaan Orhan ◽  
Gokhan Yazici ◽  
Mehmet Eray Kolsuz ◽  
Nihan Kafa ◽  
Ibrahim Sevki Bayrakdar ◽  
...  

Aim: The present study is aimed to assess the segmentation success of an artificial intelligence (AI) system based on the deep convolutional neural network (D-CNN) method for the segmentation of masseter muscles on ultrasonography (USG) images. Materials and Methods: This retrospective study was carried out by using the radiology archive of the Department of Oral and Maxillofacial Radiology of the Faculty of Dentistry in Ankara University. A total of 195 anonymized USG images were used in this retrospective study. The deep learning process was performed using U-net, Pyramid Scene Parsing Network (PSPNet), and Fuzzy Petri Net (FPN) architectures. Muscle thickness was assessed using USG by manual segmentation and measurements using USG’s software. The neural network model (CranioCatch, Eskisehir-Turkey) was then used to determine the muscles, following automatic measurements of the muscles. Accuracy, ROC area under the curve (AUC), and Precision-Recall Curves (PRC) AUC were calculated in the test dataset and compare a human observer and the AI model. Manual segmentation and measurements were compared statistically with AI ( P < .05). The Mann–Whitney U test was used to analyze whether there is a statistically significant difference between the predicted values and the actual values. Results: The AI models detected and segmented all test muscle data for FPN and U-net, while only two cases of muscles were not detected by PSPNet (false negatives). Accuracies of FPN, PSPNet, and U-net were estimated as 0.985, 0.947, and 0.969, respectively. Receiver operating characteristic scores of FPN, PSPNet, and U-net were estimated as 0.977, 0.934, and 0.969, respectively. The D-CNN measurements of the muscles were similar to manual measurements. There was no significant difference between the two measurement methods in three groups ( P > .05). Conclusion: The proposed AI system approach for the analysis of USG images seems to be promising for automatic masseter muscle segmentation and measurement of thickness. This method can help surgeons, radiologists, and other professionals such as physical therapists in evaluating the time correctly and saving time for diagnosis.


2021 ◽  
Vol 12 ◽  
Author(s):  
Augustin C. Ogier ◽  
Marc-Adrien Hostin ◽  
Marc-Emmanuel Bellemare ◽  
David Bendahan

Neuromuscular disorders are rare diseases for which few therapeutic strategies currently exist. Assessment of therapeutic strategies efficiency is limited by the lack of biomarkers sensitive to the slow progression of neuromuscular diseases (NMD). Magnetic resonance imaging (MRI) has emerged as a tool of choice for the development of qualitative scores for the study of NMD. The recent emergence of quantitative MRI has enabled to provide quantitative biomarkers more sensitive to the evaluation of pathological changes in muscle tissue. However, in order to extract these biomarkers from specific regions of interest, muscle segmentation is mandatory. The time-consuming aspect of manual segmentation has limited the evaluation of these biomarkers on large cohorts. In recent years, several methods have been proposed to make the segmentation step automatic or semi-automatic. The purpose of this study was to review these methods and discuss their reliability, reproducibility, and limitations in the context of NMD. A particular attention has been paid to recent deep learning methods, as they have emerged as an effective method of image segmentation in many other clinical contexts.


Author(s):  
Dawood Al Chanti ◽  
Vanessa Gonzalez Duque ◽  
Marion Crouzier ◽  
Antoine Nordez ◽  
Lilian Lacourpaille ◽  
...  

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