subdominant epitope
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2021 ◽  
Vol 12 ◽  
Author(s):  
Dana N. Thornlow ◽  
Andrew N. Macintyre ◽  
Thomas H. Oguin ◽  
Amelia B. Karlsson ◽  
Erica L. Stover ◽  
...  

Influenza virus alters glycosylation patterns on its surface exposed glycoproteins to evade host adaptive immune responses. The viral hemagglutinin (HA), in particular the H3 subtype, has increased its overall surface glycosylation since its introduction in 1968. We previously showed that modulating predicted N-linked glycosylation sites on H3 A/Hong Kong/1/1968 HA identified a conserved epitope at the HA interface. This epitope is occluded on the native HA trimer but is likely exposed during HA “breathing” on the virion surface. Antibodies directed to this site are protective via an ADCC-mediated mechanism. This glycan engineering strategy made an otherwise subdominant epitope dominant in the murine model. Here, we asked whether cysteine stabilization of the hyperglycosylated HA trimer could reverse this immunodominance by preventing access to the interface epitope and focus responses to the HA receptor binding site (RBS). While analysis of serum responses from immunized mice did not show a redirection to the RBS, cysteine stabilization did result in an overall reduction in immunogenicity of the interface epitope. Thus, glycan engineering and cysteine stabilization are two strategies that can be used together to alter immunodominance patterns to HA. These results add to rational immunogen design approaches used to manipulate immune responses for the development of next-generation influenza vaccines.


2018 ◽  
Vol 86 (8) ◽  
Author(s):  
Maliha Batool ◽  
Salvador Eugenio C. Caoili ◽  
Lawrence J. Dangott ◽  
Ekaterina Gerasimov ◽  
Yurij Ionov ◽  
...  

ABSTRACTThe tick-borne pathogenBorrelia burgdorferiis responsible for approximately 300,000 Lyme disease (LD) cases per year in the United States. Recent increases in the number of LD cases, in addition to the spread of the tick vector and a lack of a vaccine, highlight an urgent need for designing and developing an efficacious LD vaccine. Identification of protective epitopes that could be used to develop a second-generation (subunit) vaccine is therefore imperative. Despite the antigenicity of several lipoproteins and integral outer membrane proteins (OMPs) on theB. burgdorferisurface, the spirochetes successfully evade antibodies primarily due to the VlsE-mediated antigenic variation. VlsE is thought to sterically block antibody access to protective epitopes ofB. burgdorferi. However, it is highly unlikely that VlsE shields the entire surface epitome. Thus, identification of subdominant epitope targets that induce protection when they are made dominant is necessary to generate an efficacious vaccine. Toward the identification, we repeatedly immunized immunocompetent mice with live-attenuated VlsE-deletedB. burgdorferiand then challenged the animals with the VlsE-expressing (host-adapted) wild type. Passive immunization and Western blotting data suggested that the protection of 50% of repeatedly immunized animals against the highly immune-evasiveB. burgdorferiwas antibody mediated. Comparison of serum antibody repertoires identified in protected and nonprotected animals permitted the identification of several putative epitopes significantly associated with the protection. Most linear putative epitopes were conserved between the main pathogenicBorreliagenospecies and found within known subdominant regions of OMPs. Currently, we are performing immunization studies to test whether the identified protection-associated epitopes are protective for mice.


Vaccine ◽  
2011 ◽  
Vol 29 (43) ◽  
pp. 7483-7490 ◽  
Author(s):  
Lara Vojnov ◽  
Alexander T. Bean ◽  
Eric J. Peterson ◽  
Maria J. Chiuchiolo ◽  
Jonah B. Sacha ◽  
...  

2007 ◽  
Vol 81 (20) ◽  
pp. 11461-11467 ◽  
Author(s):  
Guillermina A. Melendi ◽  
Fidel Zavala ◽  
Ursula J. Buchholz ◽  
Guy Boivin ◽  
Peter L. Collins ◽  
...  

ABSTRACT Cytotoxic T lymphocytes (CTLs) are important for the control of virus replication during respiratory infections. For human metapneumovirus (hMPV), an H-2d-restricted CTL epitope in the M2-2 protein has been described. In this study, we screened the hMPV F, G, N, M, M2-1, and M2-2 proteins using three independent algorithms to predict H-2d CTL epitopes in BALB/c mice. A dominant epitope (GYIDDNQSI) in positions 81 to 89 of the antitermination factor M2-1 and a subdominant epitope (SPKAGLLSL) in N307-315 were detected during the anti-hMPV CTL response. Passive transfer of CD8+ T-cell lines against M2-181-89 and N307-315 protected Rag1−/− mice against hMPV challenge. Interestingly, diversification of CTL targets to include multiple epitopes was observed after repetitive infections. A subdominant response against the previously described M2-2 epitope was detected after the third infection. An understanding of the CTL response against hMPV is important for developing preventive and therapeutic strategies against the virus.


2006 ◽  
Vol 81 (5) ◽  
pp. 2349-2358 ◽  
Author(s):  
Sujin Lee ◽  
Scott A. Miller ◽  
David W. Wright ◽  
Michael T. Rock ◽  
James E. Crowe

ABSTRACT Cytotoxic T lymphocytes (CTLs) are critical for control of respiratory syncytial virus (RSV) infection in humans and mice. To investigate cellular immune responses to infection, it is important to identify major histocompatibility complex (MHC) class I-restricted CTL epitopes. In this study, we identified a new RSV-specific, H-2Kd-restricted subdominant epitope in the M2 protein, M2127-135 (amino acids 127 to 135). This finding allowed us to study the frequency of T lymphocytes responding to two H-2Kd-presented epitopes in the same protein following RSV infection by enzyme-linked immunospot (ELISPOT) and intracellular cytokine assays for both lymphoid and nonlymphoid tissues. For the subdominant epitope, we identified an optimal nine-amino-acid peptide, VYNTVISYI, which contained an H-2Kd consensus sequence with Y at position 2 and I at position 9. In addition, an MHC class I stabilization assay using TAP-2-deficient RMA-S cells transfected with Kd or Ld indicated that the epitope was presented by Kd. The ratios of T lymphocytes during the peak CTL response to RSV infection that were specific for M282-90 (dominant) to T lymphocytes specific for M2127-135 (subdominant) were approximately 3:1 in the spleen and 10:1 in the lung. These ratios were observed consistently in primary or secondary infection by the ELISPOT assay and in secondary infection by MHC/peptide tetramer staining. The number of antigen-specific T lymphocytes dropped in the 6 weeks after infection; however, the proportions of T lymphocytes specific for the immunodominant and subdominant epitopes were maintained to a remarkable degree in a tissue-specific manner. These studies will facilitate investigation of the regulation of immunodominance of RSV-specific CTL epitopes.


2006 ◽  
Vol 80 (24) ◽  
pp. 12032-12040 ◽  
Author(s):  
Edwin R. Manuel ◽  
William A. Charini ◽  
Pritha Sen ◽  
Fred W. Peyerl ◽  
Marcelo J. Kuroda ◽  
...  

ABSTRACT Dominant epitope-specific CD8+ T-lymphocyte responses play a central role in controlling viral spread. We explored the basis for the development of this focused immune response in simian immunodeficiency virus (SIV)- and simian-human immunodeficiency virus (SHIV)-infected rhesus monkeys through the use of two dominant (p11C and p199RY) and two subdominant (p68A and p56A) epitopes. Using real-time PCR to quantitate T-cell receptor (TCR) variable region beta (Vβ) family usage, we show that CD8+ T-lymphocyte populations specific for dominant epitopes are characterized by a diverse Vβ repertoire, whereas those specific for subdominant epitopes employ a dramatically more focused Vβ repertoire. We also demonstrate that dominant epitope-specific CD8+ T lymphocytes employ TCRs with multiple CDR3 lengths, whereas subdominant epitope-specific cells employ TCRs with a more restricted CDR3 length. Thus, the relative dominance of an epitope-specific CD8+ T-lymphocyte response reflects the clonal diversity of that response. These findings suggest that the limited clonal repertoire of subdominant epitope-specific CD8+ T-lymphocyte populations may limit the ability of these epitope-specific T-lymphocyte populations to expand and therefore limit the ability of these cell populations to contribute to the control of viral replication.


2004 ◽  
Vol 172 (11) ◽  
pp. 6658-6665 ◽  
Author(s):  
V. Peter Yeung ◽  
Judy Chang ◽  
Jeff Miller ◽  
Christopher Barnett ◽  
Marcia Stickler ◽  
...  

2001 ◽  
Vol 44 (14) ◽  
pp. 2370-2373 ◽  
Author(s):  
Mauro Marastoni ◽  
Martina Bazzaro ◽  
Fabiola Micheletti ◽  
Riccardo Gavioli ◽  
Roberto Tomatis

2001 ◽  
Vol 69 (5) ◽  
pp. 3427-3430 ◽  
Author(s):  
Takashi Yamada ◽  
Hiroshi Uchiyama ◽  
Toshi Nagata ◽  
Masato Uchijima ◽  
Takafumi Suda ◽  
...  

ABSTRACT Taking advantage of the fact that plasmid DNA encoding a single cytotoxic T lymphocyte (CTL) epitope can induce CTLs, we examined the influence of T-cell responses to dominant epitopes on those to a subdominant epitope derived from Listeria monocytogenes. Our data suggest that interaction between T cells against dominant and subdominant epitopes does not operate in the generation of the hierarchy. Furthermore, we found that a single dominant epitope is sufficient for the induction of protective immunity.


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