scholarly journals Carbohydrate-Encapsulated Gold Nanoparticles for Rapid Target-Protein Identification and Binding-Epitope Mapping

ChemBioChem ◽  
2005 ◽  
Vol 6 (7) ◽  
pp. 1169-1173 ◽  
Author(s):  
Yu-Ju Chen ◽  
Shu-Hua Chen ◽  
Yuh-Yih Chien ◽  
Yu-Wan Chang ◽  
Hsin-Kai Liao ◽  
...  
Langmuir ◽  
2013 ◽  
Vol 29 (39) ◽  
pp. 12317-12327 ◽  
Author(s):  
Keerati Kusolkamabot ◽  
Pornpen Sae-ung ◽  
Nakorn Niamnont ◽  
Kanet Wongravee ◽  
Mongkol Sukwattanasinitt ◽  
...  

Author(s):  
Mingliang Ma ◽  
Huan Qi ◽  
Chuansheng Hu ◽  
Zhaowei Xu ◽  
Fanlin Wu ◽  
...  

Abstract PD-1 plays an important role as an immune checkpoint. Sintilimab is a newly approved PD-1 antibody for cancer immunotherapy with an unknown binding epitope on PD-1. In this study, to elucidate the molecular mechanism by which sintilimab blocks PD-1 activation, we applied Antibody binding epitope Mapping (AbMap) to identify the binding epitope of sintilimab. An epitope was successfully identified, i.e. SLAPKA, aa 127–132. By constructing a series of point mutations, the dominant residues S127, L128, A129, P130, and A132 of PD-1 were further validated by western blot analysis, biolayer interferometry, and flow cytometry. Structural analysis showed that the epitope is partially within the binding interface of PD-1 and PD-L1, and this epitope also partially overlaps with that of nivolumab and pembrolizumab. These results demonstrate that sintilimab can attenuate PD-1 activation by directly competing with the interaction between PD-1 and PD-L1 through binding with the key residues of the FG loop on PD-1. This study also demonstrates the high efficiency and accuracy of AbMap for determining the binding epitope of therapeutic antibodies.


Chemosensors ◽  
2020 ◽  
Vol 8 (4) ◽  
pp. 98
Author(s):  
Dai Lu ◽  
Dong Zhang ◽  
Qian Zhao ◽  
Xiangyang Lu ◽  
Xingbo Shi

Unmodified gold nanoparticles (AuNPs)-based aptasensing (uGA) assay has been widely implemented in the determination of many different targets, but there are few reports on protein detection using uGA. Here, we designed a uGA assay for protein detection including the elimination of interfering proteins. Positively charged protein can be absorbed directly on the surface of AuNPs to form “protein corona”, which results in the aggregation of AuNPs even without salt addition, thereby preventing target protein detection. To overcome this problem, we systematically investigated the effect of modifying the pH of the solution during the uGA assay. A probe solution with a pH slightly higher than the isoelectric points (pI) of the target protein was optimal for protein detection in the uGA assay, allowing the aptamer to selectively detect the target protein. Three proteins (beta-lactoglobulin, lactoferrin, and lysozyme) with different pI were chosen as model proteins to validate our method. Positively charged interfering proteins (with pIs higher than the optimal pH) were removed by centrifugation of protein corona/AuNPs aggregates before the implementation of actual sample detection. Most importantly, the limit of detection (LOD) for all three model proteins was comparable to that of other methods, indicating the significance of modulating the pH. Moreover, choosing a suitable pH for a particular target protein was validated as a universal method, which is significant for developing a novel, simple, cost-effective uGA assay for protein detection.


RSC Advances ◽  
2018 ◽  
Vol 8 (68) ◽  
pp. 38758-38764
Author(s):  
Jianwei Zhao ◽  
Cuiping Li ◽  
Guimin Ma ◽  
Wenhui Hao ◽  
Hongxia Jia

A novel colorimetric strategy for protein detection was developed based on unmodified gold nanoparticles (AuNPs) and terminal protection from a target protein.


2020 ◽  
Vol 101 (1) ◽  
Author(s):  
Michihiko Tsushima ◽  
Shinichi Sato ◽  
Keita Nakane ◽  
Hiroyuki Nakamura

Author(s):  
Kanna Mori ◽  
Kaori Sakurai

Clickable photoreactive gold nanoparticles have been developed to facilitate one-step preparation of photoaffinity probes for bioactive small molecules and their application to target protein analysis.


2013 ◽  
Vol 9 (4) ◽  
pp. 544 ◽  
Author(s):  
Jongmin Park ◽  
Minseob Koh ◽  
Seung Bum Park

2020 ◽  
Vol 309 ◽  
pp. 125603 ◽  
Author(s):  
Ziye Zhang ◽  
Xiu-Min Li ◽  
Hang Xiao ◽  
Anna Nowak-Wegrzyn ◽  
Peng Zhou

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