Segmentation of Lumbar Vertebrae Slices from CT Images

Author(s):  
Hugo Hutt ◽  
Richard Everson ◽  
Judith Meakin
Keyword(s):  
2009 ◽  
Vol 36 (3) ◽  
pp. 609-613 ◽  
Author(s):  
RUKMINI M. KONATALAPALLI ◽  
PAUL J. DEMARCO ◽  
JAMES S. JELINEK ◽  
MARK MURPHEY ◽  
MICHAEL GIBSON ◽  
...  

Objective.Gout typically affects the peripheral joints of the appendicular skeleton and rarely involves the axial joints. The literature on axial gout is limited to case reports and case series. This preliminary study was conducted to identify the frequency and characteristics of axial gout.Methods.Six hundred thirty medical records with ICD codes 274.0, 274.82, and 274.9 for peripheral gout were reviewed. Ninety-two patients had clinical or crystal-proven gout, of which 64 had prior computed tomography (CT) images of the spine performed for various medical reasons. These CT images were reviewed for features of axial gout, which include vertebral erosions mainly at the discovertebral junction and the facet joints, deposits of tophi, and erosions in the vertebral body, epidural space, ligamentum flavum and pars interarticularis.Results.Nine of the 64 patients had radiographic changes suggestive of axial gout. Lumbar vertebrae were most commonly involved, with facet joint erosions being the most common finding. Isolated involvement of the sacroiliac joints was seen in 2 patients. Axial gout had been diagnosed clinically in only one patient.Conclusion.Radiologic changes of axial gout were more common than recognized clinically, with a frequency of 14%. Since not all patients had CT images, it is possible that the frequency of axial involvement was even greater. A prospective study is needed to further define this process.


10.29007/vt7v ◽  
2018 ◽  
Author(s):  
Rens Janssens ◽  
Guoyan Zheng

We present a method to address the challenging problem of automatic segmentation of lumbar vertebrae from CT images acquired with varying fields of view. Our method is based on cascaded 3D Fully Convolutional Networks (FCNs) consisting of a localization FCN and a segmentation FCN. More specifically, in the first step we train a regression 3D FCN (we call it “LocalizationNet”) to find the bounding box of the lumbar region. After that, a 3D U-net like FCN (we call it “SegmentationNet”) is then developed, which after training, can perform a pixel-wise multi-class segmentation to map a cropped lumber region volumetric data to its volume-wise labels. Evaluated on publicly available datasets, our method achieved an average Dice coefficient of 95.77 ± 0.81% and an average symmetric surface distance of 0.37 ± 0.06 mm.


2000 ◽  
Vol 9 (3) ◽  
pp. 242-248 ◽  
Author(s):  
S. H. Zhou ◽  
I. D. McCarthy ◽  
A. H. McGregor ◽  
R. R. H. Coombs ◽  
S. P. F. Hughes

2021 ◽  
pp. 028418512110681
Author(s):  
Hong Dai ◽  
Yutao Wang ◽  
Randi Fu ◽  
Sijia Ye ◽  
Xiuchao He ◽  
...  

Background Measurement of bone mineral density (BMD) is the most important method to diagnose osteoporosis. However, current BMD measurement is always performed after a fracture has occurred. Purpose To explore whether a radiomic model based on abdominal computed tomography (CT) can predict the BMD of lumbar vertebrae. Material and Methods A total of 245 patients who underwent both dual-energy X-ray absorptiometry (DXA) and abdominal CT examination (training cohort, n = 196; validation cohort, n = 49) were included in our retrospective study. In total, 1218 image features were extracted from abdominal CT images for each patient. Combined with clinical information, three steps including least absolute shrinkage and selection operator (LASSO) regression were used to select key features. A two-tier stacking regression model with multi-algorithm fusion was used for BMD prediction, which can integrate the advantages of linear model and non-linear model. The prediction results of this model were compared with those using a single regressor. The degree-of-freedom adjusted coefficient of determination (Adjusted-R2), root mean square error (RMSE), and mean absolute error (MAE) were used to evaluate the regression performance. Results Compared with other regression methods, the two-tier stacking regression model has a higher regression performance, with Adjusted-R2, RMSE, and MAE of 0.830, 0.077, and 0.06, respectively. Pearson correlation analysis and Bland–Altman analysis showed that the BMD predicted by the model had a high correlation with the DXA results (r = 0.932, difference = −0.01 ± 0.1412 mg/cm2). Conclusion Using radiomics, the BMD of lumbar vertebrae could be predicted from abdominal CT images.


Sign in / Sign up

Export Citation Format

Share Document