Building Virtual High-Performance Computing Clusters with Docker: An Application Study at the University of Economics Ho Chi Minh City

2021 ◽  
pp. 1-9
Author(s):  
Quoc Hung Nguyen ◽  
Thanh Le ◽  
Ha Quang Dinh Vo ◽  
Viet Phuong Truong
2015 ◽  
Vol 2015 ◽  
pp. 1-19 ◽  
Author(s):  
Julio Dondo Gazzano ◽  
Francisco Sanchez Molina ◽  
Fernando Rincon ◽  
Juan Carlos López

FPGAs have shown several characteristics that make them very attractive for high performance computing (HPC). The impressive speed-up factors that they are able to achieve, the reduced power consumption, and the easiness and flexibility of the design process with fast iterations between consecutive versions are examples of benefits obtained with their use. However, there are still some difficulties when using reconfigurable platforms as accelerator that need to be addressed: the need of an in-depth application study to identify potential acceleration, the lack of tools for the deployment of computational problems in distributed hardware platforms, and the low portability of components, among others. This work proposes a complete grid infrastructure for distributed high performance computing based on dynamically reconfigurable FPGAs. Besides, a set of services designed to facilitate the application deployment is described. An example application and a comparison with other hardware and software implementations are shown. Experimental results show that the proposed architecture offers encouraging advantages for deployment of high performance distributed applications simplifying development process.


ITNOW ◽  
2021 ◽  
Vol 63 (4) ◽  
pp. 12-13
Author(s):  
Loïc Lannelongue

Abstract Scientists, empowered by huge amounts of computing power, storage and memory are making world changing discoveries — including to help combat climate change. Loïc Lannelongue, a PhD student at the University of Cambridge, explores how high performance computing itself can lighten its carbon contribution.


2020 ◽  
Author(s):  
Kendall Byler ◽  
Joseph Landman ◽  
Jerome Baudry

This work describes using a supercomputer to perform virtual screening of natural products and natural products derivatives against several conformations of 3 proteins of SARS-CoC-2 : papain-like protease, main protease and spike protein. We analyze the common chemical features of the top molecules predicted to bind and describe the pharmacophores responsible for The University of Ala predicted binding.


MRS Bulletin ◽  
1997 ◽  
Vol 22 (10) ◽  
pp. 5-6
Author(s):  
Horst D. Simon

Recent events in the high-performance computing industry have concerned scientists and the general public regarding a crisis or a lack of leadership in the field. That concern is understandable considering the industry's history from 1993 to 1996. Cray Research, the historic leader in supercomputing technology, was unable to survive financially as an independent company and was acquired by Silicon Graphics. Two ambitious new companies that introduced new technologies in the late 1980s and early 1990s—Thinking Machines and Kendall Square Research—were commercial failures and went out of business. And Intel, which introduced its Paragon supercomputer in 1994, discontinued production only two years later.During the same time frame, scientists who had finished the laborious task of writing scientific codes to run on vector parallel supercomputers learned that those codes would have to be rewritten if they were to run on the next-generation, highly parallel architecture. Scientists who are not yet involved in high-performance computing are understandably hesitant about committing their time and energy to such an apparently unstable enterprise.However, beneath the commercial chaos of the last several years, a technological revolution has been occurring. The good news is that the revolution is over, leading to five to ten years of predictable stability, steady improvements in system performance, and increased productivity for scientific applications. It is time for scientists who were sitting on the fence to jump in and reap the benefits of the new technology.


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