scholarly journals Detection of liver cirrhosis in standard T2-weighted MRI using deep transfer learning

2021 ◽  
Author(s):  
Sebastian Nowak ◽  
Narine Mesropyan ◽  
Anton Faron ◽  
Wolfgang Block ◽  
Martin Reuter ◽  
...  
Keyword(s):  
Neural Networks ◽  
Liver Cirrhosis ◽  
Transfer Learning ◽  
Convolutional Neural Networks ◽  
Classification Accuracy ◽  
Automatic Segmentation ◽  
Analysis Data ◽  
Caudate Lobe ◽  
Natural Image ◽  
Liver Segmentation

Abstract Objectives To investigate the diagnostic performance of deep transfer learning (DTL) to detect liver cirrhosis from clinical MRI. Methods The dataset for this retrospective analysis consisted of 713 (343 female) patients who underwent liver MRI between 2017 and 2019. In total, 553 of these subjects had a confirmed diagnosis of liver cirrhosis, while the remainder had no history of liver disease. T2-weighted MRI slices at the level of the caudate lobe were manually exported for DTL analysis. Data were randomly split into training, validation, and test sets (70%/15%/15%). A ResNet50 convolutional neural network (CNN) pre-trained on the ImageNet archive was used for cirrhosis detection with and without upstream liver segmentation. Classification performance for detection of liver cirrhosis was compared to two radiologists with different levels of experience (4th-year resident, board-certified radiologist). Segmentation was performed using a U-Net architecture built on a pre-trained ResNet34 encoder. Differences in classification accuracy were assessed by the χ2-test. Results Dice coefficients for automatic segmentation were above 0.98 for both validation and test data. The classification accuracy of liver cirrhosis on validation (vACC) and test (tACC) data for the DTL pipeline with upstream liver segmentation (vACC = 0.99, tACC = 0.96) was significantly higher compared to the resident (vACC = 0.88, p < 0.01; tACC = 0.91, p = 0.01) and to the board-certified radiologist (vACC = 0.96, p < 0.01; tACC = 0.90, p < 0.01). Conclusion This proof-of-principle study demonstrates the potential of DTL for detecting cirrhosis based on standard T2-weighted MRI. The presented method for image-based diagnosis of liver cirrhosis demonstrated expert-level classification accuracy. Key Points • A pipeline consisting of two convolutional neural networks (CNNs) pre-trained on an extensive natural image database (ImageNet archive) enables detection of liver cirrhosis on standard T2-weighted MRI. • High classification accuracy can be achieved even without altering the pre-trained parameters of the convolutional neural networks. • Other abdominal structures apart from the liver were relevant for detection when the network was trained on unsegmented images.

Tobacco Leaf Grading Based on Deep Convolutional Neural Networks and Machine Vision

2021 ◽  
Vol 65 (1) ◽  
pp. 11-22
Author(s):  
Mengyao Lu ◽  
Shuwen Jiang ◽  
Cong Wang ◽  
Dong Chen ◽  
Tian’en Chen
Keyword(s):  
Neural Networks ◽  
Deep Learning ◽  
Transfer Learning ◽  
Convolutional Neural Networks ◽  
Classification Accuracy ◽  
Classification Model ◽  
List Type ◽  
Tobacco Leaves ◽  
Tobacco Leaf ◽  
Grading Model

HighlightsA classification model for the front and back sides of tobacco leaves was developed for application in industry.A tobacco leaf grading method that combines a CNN with double-branch integration was proposed.The A-ResNet network was proposed and compared with other classic CNN networks.The grading accuracy of eight different grades was 91.30% and the testing time was 82.180 ms, showing a relatively high classification accuracy and efficiency.Abstract. Flue-cured tobacco leaf grading is a key step in the production and processing of Chinese-style cigarette raw materials, directly affecting cigarette blend and quality stability. At present, manual grading of tobacco leaves is dominant in China, resulting in unsatisfactory grading quality and consuming considerable material and financial resources. In this study, for fast, accurate, and non-destructive tobacco leaf grading, 2,791 flue-cured tobacco leaves of eight different grades in south Anhui Province, China, were chosen as the study sample, and a tobacco leaf grading method that combines convolutional neural networks and double-branch integration was proposed. First, a classification model for the front and back sides of tobacco leaves was trained by transfer learning. Second, two processing methods (equal-scaled resizing and cropping) were used to obtain global images and local patches from the front sides of tobacco leaves. A global image-based tobacco leaf grading model was then developed using the proposed A-ResNet-65 network, and a local patch-based tobacco leaf grading model was developed using the ResNet-34 network. These two networks were compared with classic deep learning networks, such as VGGNet, GoogLeNet-V3, and ResNet. Finally, the grading results of the two grading models were integrated to realize tobacco leaf grading. The tobacco leaf classification accuracy of the final model, for eight different grades, was 91.30%, and grading of a single tobacco leaf required 82.180 ms. The proposed method achieved a relatively high grading accuracy and efficiency. It provides a method for industrial implementation of the tobacco leaf grading and offers a new approach for the quality grading of other agricultural products. Keywords: Convolutional neural network, Deep learning, Image classification, Transfer learning, Tobacco leaf grading

Deep Transfer Learning for Histopathological Diagnosis of Cervical Cancer Using Convolutional Neural Networks with Visualization Schemes

2020 ◽  
Vol 10 (2) ◽  
pp. 391-400 ◽  
Author(s):  
Ying Chen ◽  
Xiaomin Qin ◽  
Jingyu Xiong ◽  
Shugong Xu ◽  
Jun Shi ◽  
...  
Keyword(s):  
Neural Networks ◽  
Cervical Cancer ◽  
Learning Strategies ◽  
Transfer Learning ◽  
Convolutional Neural Networks ◽  
Characteristic Curve ◽  
Disease Classification ◽  
Natural Image ◽  
Histopathological Diagnosis ◽  
The Impact

This study aimed to propose a deep transfer learning framework for histopathological image analysis by using convolutional neural networks (CNNs) with visualization schemes, and to evaluate its usage for automated and interpretable diagnosis of cervical cancer. First, in order to examine the potential of the transfer learning for classifying cervix histopathological images, we pre-trained three state-of-the-art CNN architectures on large-size natural image datasets and then fine-tuned them on small-size histopathological datasets. Second, we investigated the impact of three learning strategies on classification accuracy. Third, we visualized both the multiple-layer convolutional kernels of CNNs and the regions of interest so as to increase the clinical interpretability of the networks. Our method was evaluated on a database of 4993 cervical histological images (2503 benign and 2490 malignant). The experimental results demonstrated that our method achieved 95.88% sensitivity, 98.93% specificity, 97.42% accuracy, 94.81% Youden's index and 99.71% area under the receiver operating characteristic curve. Our method can reduce the cognitive burden on pathologists for cervical disease classification and improve their diagnostic efficiency and accuracy. It may be potentially used in clinical routine for histopathological diagnosis of cervical cancer.

scholarly journals Interpretation of Swedish Sign Language Using Convolutional Neural Networks and Transfer Learning

2021 ◽  
Vol 2 (3) ◽  
Author(s):  
Gustaf Halvardsson ◽  
Johanna Peterson ◽  
César Soto-Valero ◽  
Benoit Baudry
Keyword(s):  
Neural Networks ◽  
Sign Language ◽  
Transfer Learning ◽  
Convolutional Neural Networks ◽  
Web Application ◽  
Training Dataset ◽  
Motion Processing ◽  
Image Perception ◽  
Sign Languages ◽  
High Level

AbstractThe automatic interpretation of sign languages is a challenging task, as it requires the usage of high-level vision and high-level motion processing systems for providing accurate image perception. In this paper, we use Convolutional Neural Networks (CNNs) and transfer learning to make computers able to interpret signs of the Swedish Sign Language (SSL) hand alphabet. Our model consists of the implementation of a pre-trained InceptionV3 network, and the usage of the mini-batch gradient descent optimization algorithm. We rely on transfer learning during the pre-training of the model and its data. The final accuracy of the model, based on 8 study subjects and 9400 images, is 85%. Our results indicate that the usage of CNNs is a promising approach to interpret sign languages, and transfer learning can be used to achieve high testing accuracy despite using a small training dataset. Furthermore, we describe the implementation details of our model to interpret signs as a user-friendly web application.

scholarly journals Using spatial-temporal ensembles of convolutional neural networks for lumen segmentation in ureteroscopy

2021 ◽  
Author(s):  
Jorge F. Lazo ◽  
Aldo Marzullo ◽  
Sara Moccia ◽  
Michele Catellani ◽  
Benoit Rosa ◽  
...  
Keyword(s):  
Neural Networks ◽  
Convolutional Neural Networks ◽  
State Of The Art ◽  
Automatic Segmentation ◽  
Temporal Information ◽  
Invasive Technique ◽  
Dice Similarity Coefficient ◽  
Specular Reflections ◽  
Lumen Segmentation ◽  
Previous State

Abstract Purpose Ureteroscopy is an efficient endoscopic minimally invasive technique for the diagnosis and treatment of upper tract urothelial carcinoma. During ureteroscopy, the automatic segmentation of the hollow lumen is of primary importance, since it indicates the path that the endoscope should follow. In order to obtain an accurate segmentation of the hollow lumen, this paper presents an automatic method based on convolutional neural networks (CNNs). Methods The proposed method is based on an ensemble of 4 parallel CNNs to simultaneously process single and multi-frame information. Of these, two architectures are taken as core-models, namely U-Net based in residual blocks ($$m_1$$ m 1 ) and Mask-RCNN ($$m_2$$ m 2 ), which are fed with single still-frames I(t). The other two models ($$M_1$$ M 1 , $$M_2$$ M 2 ) are modifications of the former ones consisting on the addition of a stage which makes use of 3D convolutions to process temporal information. $$M_1$$ M 1 , $$M_2$$ M 2 are fed with triplets of frames ($$I(t-1)$$ I ( t - 1 ) , I(t), $$I(t+1)$$ I ( t + 1 ) ) to produce the segmentation for I(t). Results The proposed method was evaluated using a custom dataset of 11 videos (2673 frames) which were collected and manually annotated from 6 patients. We obtain a Dice similarity coefficient of 0.80, outperforming previous state-of-the-art methods. Conclusion The obtained results show that spatial-temporal information can be effectively exploited by the ensemble model to improve hollow lumen segmentation in ureteroscopic images. The method is effective also in the presence of poor visibility, occasional bleeding, or specular reflections.

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