Improved feature extraction in seismic data: multi-attribute study from principal component analysis

2021 ◽  
Vol 41 (4) ◽  
Author(s):  
Animireddy Ramesh ◽  
Nittala Satyavani ◽  
Mohammed Rafique Shamshoddin Attar
Polymers ◽  
2021 ◽  
Vol 13 (23) ◽  
pp. 4117
Author(s):  
Y-h. Taguchi ◽  
Turki Turki

The development of the medical applications for substances or materials that contact cells is important. Hence, it is necessary to elucidate how substances that surround cells affect gene expression during incubation. In the current study, we compared the gene expression profiles of cell lines that were in contact with collagen–glycosaminoglycan mesh and control cells. Principal component analysis-based unsupervised feature extraction was applied to identify genes with altered expression during incubation in the treated cell lines but not in the controls. The identified genes were enriched in various biological terms. Our method also outperformed a conventional methodology, namely, gene selection based on linear regression with time course.


Author(s):  
Y-H. Taguchi ◽  
Mitsuo Iwadate ◽  
Hideaki Umeyama ◽  
Yoshiki Murakami ◽  
Akira Okamoto

Feature Extraction (FE) is a difficult task when the number of features is much larger than the number of samples, although that is a typical situation when biological (big) data is analyzed. This is especially true when FE is stable, independent of the samples considered (stable FE), and is often required. However, the stability of FE has not been considered seriously. In this chapter, the authors demonstrate that Principal Component Analysis (PCA)-based unsupervised FE functions as stable FE. Three bioinformatics applications of PCA-based unsupervised FE—detection of aberrant DNA methylation associated with diseases, biomarker identification using circulating microRNA, and proteomic analysis of bacterial culturing processes—are discussed.


Author(s):  
Mohsen Moshki ◽  
Mehran Garmehi ◽  
Peyman Kabiri

In this chapter, application of Principal Component Analysis (PCA) and one of its extensions on intrusion detection is investigated. This extended version of PCA is modified to cover an important shortcoming of traditional PCA. In order to evaluate these modifications, it is mathematically proved that these modifications are beneficial and later on a known dataset such as the DARPA99 dataset is used to verify results experimentally. To verify this approach, initially the traditional PCA is used to preprocess the dataset. Later on, using a simple classifier such as KNN, the effectiveness of the multiclass classification is studied. In the reported work, instead of traditional PCA, a revised version of PCA named Weighted PCA (WPCA) will be used for feature extraction. The results from applying the aforementioned method to the DARPA99 dataset show that this approach results in better accuracy than the traditional PCA when a number of features are limited, a number of classes are large, and a population of classes is unbalanced. In some situations WPCA outperforms traditional PCA by more than 1% in accuracy.


Author(s):  
Gopal Krishan Prajapat ◽  
Rakesh Kumar

Facial feature extraction and recognition plays a prominent role in human non-verbal interaction and it is one of the crucial factors among pose, speech, facial expression, behaviour and actions which are used in conveying information about the intentions and emotions of a human being. In this article an extended local binary pattern is used for the feature extraction process and a principal component analysis (PCA) is used for dimensionality reduction. The projections of the sample and model images are calculated and compared by Euclidean distance method. The combination of extended local binary pattern and PCA (ELBP+PCA) improves the accuracy of the recognition rate and also diminishes the evaluation complexity. The evaluation of proposed facial expression recognition approach will focus on the performance of the recognition rate. A series of tests are performed for the validation of algorithms and to compare the accuracy of the methods on the JAFFE, Extended Cohn-Kanade images database.


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