Chromosomal regions associated with segregation distortion of molecular markers in F2 , backcross, doubled haploid, and recombinant inbred populations in rice (Oryza sativa L.)

1997 ◽  
Vol 253 (5) ◽  
pp. 535-545 ◽  
Author(s):  
Y. Xu ◽  
L. Zhu ◽  
J. Xiao ◽  
N. Huang ◽  
S. R. McCouch
Keyword(s):  
Oryza Sativa ◽  
Molecular Markers ◽  
Segregation Distortion ◽  
Doubled Haploid ◽  
Recombinant Inbred ◽  
Oryza Sativa L ◽  
Inbred Populations

Effects of high temperature on spikelet sterility in rice (Oryza sativa L.): association between molecular markers and allelic phenotypic effect in field condition

2021 ◽  
Author(s):  
Parameswaran Chidambaranathan ◽  
Cayalvizhi Balasubramaniasai ◽  
Niranjana Behura ◽  
Mohini Purty ◽  
Sanghamitra Samantaray ◽  
...  
Keyword(s):  
Oryza Sativa ◽  
Molecular Markers ◽  
High Temperature ◽  
Field Condition ◽  
Oryza Sativa L ◽  
Phenotypic Effect ◽  
Spikelet Sterility

scholarly journals Response of Iranian Rice Recombinant Inbred Lines (Oryza sativa L.) to Salt Stress in Seedling Stage

2019 ◽  
Vol 11 (29) ◽  
pp. 65-84
Author(s):  
Seyedeh Minoo Mirarab Razi ◽  
Reza Shirzadian-Khorramabad ◽  
Hossein Sabouri ◽  
Babak Rabiei ◽  
Hossein Hosseini Moghadam ◽  
...  
Keyword(s):  
Oryza Sativa ◽  
Salt Stress ◽  
Recombinant Inbred ◽  
Oryza Sativa L ◽  
Recombinant Inbred Lines ◽  
Inbred Lines ◽  
Seedling Stage

scholarly journals GENETIC VARIATION AND PATH ANALYSIS ON AGRONOMIC TRAITS OF RECOMBINANT INBRED LINES IN RICE (Oryza sativa L.).

2018 ◽  
Vol 6 (3) ◽  
pp. 280-291
Author(s):  
Myint Aye ◽  
◽  
NyoMar Htwe ◽  
KhinMu Aye ◽  
MoeMoeKyi Win ◽  
...  
Keyword(s):  
Genetic Variation ◽  
Oryza Sativa ◽  
Path Analysis ◽  
Recombinant Inbred ◽  
Agronomic Traits ◽  
Oryza Sativa L ◽  
Recombinant Inbred Lines ◽  
Inbred Lines

scholarly journals QTL analysis of novel genomic regions associated with yield and yield related traits in new plant type based recombinant inbred lines of rice (Oryza sativa L.)

2012 ◽  
Vol 12 (1) ◽  
pp. 137 ◽  
Author(s):  
Balram Marathi ◽  
Smriti Guleria ◽  
Trilochan Mohapatra ◽  
Rajender Parsad ◽  
Nagarajan Mariappan ◽  
...  
Keyword(s):  
Oryza Sativa ◽  
Qtl Analysis ◽  
Recombinant Inbred ◽  
Oryza Sativa L ◽  
Recombinant Inbred Lines ◽  
Inbred Lines ◽  
Plant Type ◽  
Genomic Regions

scholarly journals RFLP Linkage Map included the Information of Segregation Distortion in a Wide-Cross Population between Indica and Japonica Rice (Oryza sativa L.).

2000 ◽  
Vol 50 (2) ◽  
pp. 65-72 ◽  
Author(s):  
Yoshimichi Fukuta ◽  
Hideki Sasahara ◽  
Katsunori Tamura ◽  
Toshinori Fukuyama
Keyword(s):  
Oryza Sativa ◽  
Linkage Map ◽  
Segregation Distortion ◽  
Oryza Sativa L ◽  
Japonica Rice ◽  
Wide Cross

scholarly journals Mapping segregation distortion loci and quantitative trait loci for spikelet sterility in rice (Oryza sativa L.)

2005 ◽  
Vol 86 (2) ◽  
pp. 97-106 ◽  
Author(s):  
CHUNMING WANG ◽  
CHENGSONG ZHU ◽  
HUQU ZHAI ◽  
JIANMIN WAN
Keyword(s):  
Oryza Sativa ◽  
Segregation Distortion ◽  
Quantitative Trait ◽  
Oryza Sativa L ◽  
Segregation Ratio ◽  
Chromosome 8 ◽  
Spikelet Fertility ◽  
Spikelet Sterility ◽  
Multipoint Method ◽  
Two Populations

Markers with segregation ratio distortion are commonly observed in data sets used for quantitative trait locus (QTL) mapping. In this study, a multipoint method of maximum likelihood (ML) was newly developed to estimate the positions and effects of the segregation distortion loci (SDLs) in two F2 populations of rice (Oryza sativa L.), i.e. Taichung65/Bhadua (TB; japonica–indica cross) and CPSLO17/W207-2 (CW; japonica–japonica). Of the four parents, W207-2 and Bhadua were found to be spikelet semi-sterile and stably inherited through selfing, and spikelet fertility segregated in the two populations. Therefore, recombination frequencies were recalculated after mapping the SDLs by using the multipoint method, and the molecular linkage maps of the two F2 populations were constructed to detect QTLs underlying spikelet fertility. As a result, five SDLs in the TB population were mapped on chromosomes 1, 3, 8 and 9, respectively. Two major QTLs underlying spikelet fertility, namely qSS-6a and qSS-8a, were detected on chromosomes 6 and 8, respectively. In the CW population, a total of 12 SDLs were detected on all 12 chromosomes except 1, 5, 7 and 11. Three QTLs underlying spikelet sterility, namely qSS-2, qSS-6b and qSS-8b on chromosomes 2, 6 and 8, were determined on the whole genome scale. Interestingly, both qSS-6a and qSS-6b, detected in the two F2 populations respectively, were located on a similar position as the S5 gene on chromosome 6; while qSS-8a and qSS-8b were also simultaneously detected on similar positions of the short arm of chromosome 8 in the two populations, which should be a new sterility gene showing the same type of zygotic selection.

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