Sources of variation in plant responses to belowground insect herbivory: a meta-analysis

Oecologia ◽  
2011 ◽  
Vol 169 (2) ◽  
pp. 441-452 ◽  
Author(s):  
Elena L. Zvereva ◽  
Mikhail V. Kozlov
2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Alejandro Garcia ◽  
M. Estrella Santamaria ◽  
Isabel Diaz ◽  
Manuel Martinez

AbstractThe success in the response of a plant to a pest depends on the regulatory networks that connect plant perception and plant response. Meta-analyses of transcriptomic responses are valuable tools to discover novel mechanisms in the plant/herbivore interplay. Considering the quantity and quality of available transcriptomic analyses, Arabidopsis thaliana was selected to test the ability of comprehensive meta-analyses to disentangle plant responses. The analysis of the transcriptomic data showed a general induction of biological processes commonly associated with the response to herbivory, like jasmonate signaling or glucosinolate biosynthesis. However, an uneven induction of many genes belonging to these biological categories was found, which was likely associated with the particularities of each specific Arabidopsis-herbivore interaction. A thorough analysis of the responses to the lepidopteran Pieris rapae and the spider mite Tetranychus urticae highlighted specificities in the perception and signaling pathways associated with the expression of receptors and transcription factors. This information was translated to a variable alteration of secondary metabolic pathways. In conclusion, transcriptomic meta-analysis has been revealed as a potent way to sort out relevant physiological processes in the plant response to herbivores. Translation of these transcriptomic-based analyses to crop species will permit a more appropriate design of biotechnological programs.


Author(s):  
Janaina da Silva Fortirer ◽  
Adriana Grandis ◽  
Camila de Toledo Castanho ◽  
Marcos Silveira Buckeridge

2019 ◽  
Vol 110 (4) ◽  
pp. 403-410 ◽  
Author(s):  
Ned A Dochtermann ◽  
Tori Schwab ◽  
Monica Anderson Berdal ◽  
Jeremy Dalos ◽  
Raphaël Royauté

AbstractThe contribution of genetic variation to phenotypes is a central factor in whether and how populations respond to selection. The most common approach to estimating these influences is via the calculation of heritabilities, which summarize the contribution of genetic variation to phenotypic variation. Heritabilities also indicate the relative effect of genetic variation on phenotypes versus that of environmental sources of variation. For labile traits like behavioral responses, life history traits, and physiological responses, estimation of heritabilities is important as these traits are strongly influenced by the environment. Thus, knowing whether or not genetic variation is present within populations is necessary to understand whether or not these populations can evolve in response to selection. Here we report the results of a meta-analysis summarizing what we currently know about the heritability of behavior. Using phylogenetically controlled methods we assessed the average heritability of behavior (0.235)—which is similar to that reported in previous analyses of physiological and life history traits—and examined differences among taxa, behavioral classifications, and other biologically relevant factors. We found that there was considerable variation among behaviors as to how heritable they were, with migratory behaviors being the most heritable. Interestingly, we found no effect of phylogeny on estimates of heritability. These results suggest, first, that behavior may not be particularly unique in the degree to which it is influenced by factors other than genetics and, second, that those factors influencing whether a behavioral trait will have low or high heritability require further consideration.


2019 ◽  
Vol 20 (16) ◽  
pp. 3930 ◽  
Author(s):  
Komivi Dossa ◽  
Marie A. Mmadi ◽  
Rong Zhou ◽  
Tianyuan Zhang ◽  
Ruqi Su ◽  
...  

Sesame is a source of a healthy vegetable oil, attracting a growing interest worldwide. Abiotic stresses have devastating effects on sesame yield; hence, studies have been performed to understand sesame molecular responses to abiotic stresses, but the core abiotic stress-responsive genes (CARG) that the plant reuses in response to an array of environmental stresses are unknown. We performed a meta-analysis of 72 RNA-Seq datasets from drought, waterlogging, salt and osmotic stresses and identified 543 genes constantly and differentially expressed in response to all stresses, representing the sesame CARG. Weighted gene co-expression network analysis of the CARG revealed three functional modules controlled by key transcription factors. Except for salt stress, the modules were positively correlated with the abiotic stresses. Network topology of the modules showed several hub genes predicted to play prominent functions. As proof of concept, we generated over-expressing Arabidopsis lines with hub and non-hub genes. Transgenic plants performed better under drought, waterlogging, and osmotic stresses than the wild-type plants but did not tolerate the salt treatment. As expected, the hub gene was significantly more potent than the non-hub gene. Overall, we discovered several novel candidate genes, which will fuel investigations on plant responses to multiple abiotic stresses.


2013 ◽  
Vol 102 (1) ◽  
pp. 194-208 ◽  
Author(s):  
Kiona Ogle ◽  
Sharmila Pathikonda ◽  
Karla Sartor ◽  
Jeremy W. Lichstein ◽  
Jeanne L. D. Osnas ◽  
...  

2019 ◽  
Vol 223 (3) ◽  
pp. 1073-1105 ◽  
Author(s):  
Hendrik Poorter ◽  
Ülo Niinemets ◽  
Nikolaos Ntagkas ◽  
Alrun Siebenkäs ◽  
Maarit Mäenpää ◽  
...  

2008 ◽  
Vol 20 (7) ◽  
pp. 1964-1983 ◽  
Author(s):  
Synan AbuQamar ◽  
Mao-Feng Chai ◽  
Hongli Luo ◽  
Fengming Song ◽  
Tesfaye Mengiste

Sign in / Sign up

Export Citation Format

Share Document