Dynamic distribution of nasal microbial community in yaks (Bos grunniens) at different ages

2021 ◽  
Vol 53 (6) ◽  
Author(s):  
Zhigang Liu ◽  
Qingsong Sun ◽  
Zhonghua Su ◽  
Qudrat Ullah ◽  
Weixia Yang ◽  
...  
PLoS ONE ◽  
2019 ◽  
Vol 14 (2) ◽  
pp. e0211828 ◽  
Author(s):  
Yawei Xing ◽  
Jianping Liu ◽  
Fanggen Lu ◽  
Li Wang ◽  
Ying Li ◽  
...  

Forests ◽  
2019 ◽  
Vol 10 (12) ◽  
pp. 1083
Author(s):  
Xiu Lan ◽  
Hu Du ◽  
Wanxia Peng ◽  
Yongxian Liu ◽  
Zhilian Fang ◽  
...  

We selected five different ages of eucalyptus plantation sites to understand the culturable microbial functional diversity and the ecological functions of the soil from the eucalyptus plantations in Guangxi. We investigated the carbon source metabolic activity and diversity features of surface soil microbes using the Biolog EcoPlate method (Biolog Inc., Hayward, CA, USA), along with the microbial functional diversity and physicochemical properties of the soil. The results suggest that the carbon source utilization capacity of the soil microbes at various forest ages manifested as 3-year-old > 5-year-old > 2-year-old > 1-year-old > 8-year-old. The abundance, Shannon–Weiner, Pielou, Simpson, and McIntosh diversity indices of the soil microbes initially increased and then decreased with further increase in forest age, with the highest levels in 3- and 5-year-old forests. As per the heatmap analysis, the 3-year-old forest could metabolize the most carbon source species, while the 1- and 8-year-old forests could metabolize the least. Carbohydrates were the most frequently metabolized carbon source. The principal component analysis (PCA) shows that PC1 and PC2 extracted from the 31 factors have 52.42% and 13.39% of the variable variance, respectively. Carbohydrates contributed most to PCA, followed by amino acids and carboxylic acids, and phenolic acids and amines, the least. Canonical correspondence analysis shows that total carbon, alkali-hydrolyzable nitrogen, total nitrogen, total potassium, and pH negatively correlate with soil microbial functional diversity, whereas total and available phosphorus positively correlate with it. To sum up, the soil microbial community structure of eucalyptus plantations at various ages reflects the soil environmental conditions and nutrient availability, which is of great significance in the efficient management and high-quality operation of their plantations in Guangxi.


PLoS ONE ◽  
2015 ◽  
Vol 10 (2) ◽  
pp. e0117441 ◽  
Author(s):  
Wenjing Zhao ◽  
Yapeng Wang ◽  
Shuyun Liu ◽  
Jiaojiao Huang ◽  
Zhengxiao Zhai ◽  
...  

2012 ◽  
Vol 214 ◽  
pp. 366-369
Author(s):  
Hong Tao Li ◽  
Xiu Hong Xu ◽  
Jia Liu

The objectives of this study were to analysis the differences of microbial community diversity between the microbial additives (MA) compost and natural compost and the distribution (spatial and temporal) of MA during high-temperature composting by PCR-DGGE technology. The results showed that the MA started temperature rapidly; prolonged the time of maintained high-temperature process and increased the diversity of microbial than natural compost. Sequence comparison revealed that the microorganisms most belonged to uncultivable, thermophilic bacteria. Bacillus became the dominant microorganisms after mixed with MA. MA were found in the top and middle portions of the compost throughout nearly the entire composting process,but absent in the natural compost. Our finding represents an important step towards the understanding of MA and its function in the degradation process of compost.


Anaerobe ◽  
2020 ◽  
Vol 61 ◽  
pp. 102115 ◽  
Author(s):  
Lihong Zhang ◽  
Xiong Jiang ◽  
Aoyun Li ◽  
Muhammad Waqas ◽  
Xing Gao ◽  
...  

2020 ◽  
Vol 2020 ◽  
pp. 1-9
Author(s):  
Yuzhu Sha ◽  
Jiang Hu ◽  
Bingang Shi ◽  
Renqing Dingkao ◽  
Jiqing Wang ◽  
...  

A cattle-yak, which is a hybrid between a yak (Bos grunniens) and cattle (Bos taurus), is an important livestock animal, but basic questions regarding its physiology and environmental adaptation remain unanswered. To address this issue, the present study examined the species composition and functional characteristics of rumen microorganisms in the cattle-yak of different ages (2 and 3 years old) by metagenomic analysis. We found that rumen microbial community composition was similar at the two ages. Firmicutes, Fibrobacteres, Euryarchaeota, Bacteroidetes, and Proteobacteria were the predominant phyla, with Firmicutes accounting for the highest percentage of bacteria in 2-year-old (48%) and 3-year-old (46%) animals. Bacterial species involved in lignocellulose degradation were detected in the rumen of adult cattle-yaks including Ruminococcus flavefaciens, Ruminococcus albus, Fibrobacter succinogenes, and Prevotella ruminicola, with F. succinogenes being the most abundant. A total of 145,489 genes were annotated according to the Carbohydrate-active Enzyme database, which identified glycoside hydrolases as the most highly represented enzyme family. Further functional annotation revealed specific microflora and genes in the adult rumen that are potentially related to plateau adaptability. These results could explain the heterosis of the cattle-yak and provide insight into mechanisms of physiologic adaptation in plateau animals.


2018 ◽  
Vol 9 ◽  
Author(s):  
Yujian Wang ◽  
Hao Zhang ◽  
Lin Zhu ◽  
Yulin Xu ◽  
Na Liu ◽  
...  

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